RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 CFAP74Q9C0B2 1584 aa23.08■■□□□ 1.29
CPNE1-215ENST00000437100 CDC42BPBQ9Y5S2 1711 aa23.08■■□□□ 1.28
CPNE1-215ENST00000437100 COL17A1Q9UMD9 1497 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-215ENST00000437100 ARHGAP5Q13017 1502 aa23.07■■□□□ 1.28
CPNE1-215ENST00000437100 EFCAB2Q5VUJ9 269 aa23.06■■□□□ 1.28
CPNE1-215ENST00000437100 AKNAQ7Z591 1439 aa23.06■■□□□ 1.28
CPNE1-215ENST00000437100 ITSN2Q9NZM3 1697 aa23.03■■□□□ 1.28
CPNE1-215ENST00000437100 MYOM3Q5VTT5 1437 aa23.01■■□□□ 1.27
CPNE1-215ENST00000437100 KDM6BO15054 1643 aa23■■□□□ 1.27
CPNE1-215ENST00000437100 CFDP1Q9UEE9 299 aaPredicted RBP23■■□□□ 1.27
CPNE1-215ENST00000437100 ADGRL1O94910 1474 aa22.99■■□□□ 1.27
CPNE1-215ENST00000437100 SAMD9LQ8IVG5 1584 aa22.99■■□□□ 1.27
CPNE1-215ENST00000437100 ABCC1P33527 1531 aa22.98■■□□□ 1.27
CPNE1-215ENST00000437100 MIA2Q96PC5 1412 aa22.98■■□□□ 1.27
CPNE1-215ENST00000437100 SCAPERQ9BY12 1400 aa22.96■■□□□ 1.27
CPNE1-215ENST00000437100 FRMPD1Q5SYB0 1578 aa22.96■■□□□ 1.27
CPNE1-215ENST00000437100 DENND4BO75064 1496 aaPredicted RBP22.95■■□□□ 1.26
CPNE1-215ENST00000437100 ARHGEF12Q9NZN5 1544 aa22.95■■□□□ 1.26
CPNE1-215ENST00000437100 KIAA1107Q9UPP5 1409 aa22.95■■□□□ 1.26
CPNE1-215ENST00000437100 PLEKHH2Q8IVE3 1493 aa22.94■■□□□ 1.26
CPNE1-215ENST00000437100 POGZQ7Z3K3 1410 aa22.94■■□□□ 1.26
CPNE1-215ENST00000437100 CAMSAP2Q08AD1 1489 aa22.92■■□□□ 1.26
CPNE1-215ENST00000437100 FGD6Q6ZV73 1430 aa22.91■■□□□ 1.26
CPNE1-215ENST00000437100 ZNF644Q9H582 1327 aaPredicted RBP22.91■■□□□ 1.26
CPNE1-215ENST00000437100 RICTORQ6R327 1708 aa22.91■■□□□ 1.26
CPNE1-215ENST00000437100 RAPGEF3O95398 923 aa22.9■■□□□ 1.26
CPNE1-215ENST00000437100 PPARGC1BQ86YN6 1023 aaKnown RBP22.9■■□□□ 1.26
CPNE1-215ENST00000437100 SYCP2Q9BX26 1530 aa22.9■■□□□ 1.26
CPNE1-215ENST00000437100 MBD5Q9P267 1494 aa22.9■■□□□ 1.26
CPNE1-215ENST00000437100 ZNF777Q9ULD5 760 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-215ENST00000437100 TCOF1Q13428 1488 aaKnown RBP22.89■■□□□ 1.25
CPNE1-215ENST00000437100 TRAPPC8Q9Y2L5 1435 aa22.89■■□□□ 1.25
CPNE1-215ENST00000437100 ZMYM4Q5VZL5 1548 aa22.88■■□□□ 1.25
CPNE1-215ENST00000437100 KDM5CP41229 1560 aa22.88■■□□□ 1.25
CPNE1-215ENST00000437100 ZNF518AQ6AHZ1 1483 aa22.87■■□□□ 1.25
CPNE1-215ENST00000437100 PTPN23Q9H3S7 1636 aa22.84■■□□□ 1.25
CPNE1-215ENST00000437100 ARHGEF5Q12774 1597 aa22.82■■□□□ 1.24
CPNE1-215ENST00000437100 HNRNPMP52272 730 aaKnown RBP eCLIP22.82■■□□□ 1.241e-7■■■■□ 25.4
CPNE1-215ENST00000437100 AFAP1Q8N556 730 aa22.82■■□□□ 1.24
CPNE1-215ENST00000437100 MAGI2Q86UL8 1455 aa22.81■■□□□ 1.24
CPNE1-215ENST00000437100 CCDC141Q6ZP82 1450 aa22.79■■□□□ 1.24
CPNE1-215ENST00000437100 MLH3Q9UHC1 1453 aa22.79■■□□□ 1.24
CPNE1-215ENST00000437100 RRBP1Q9P2E9 1410 aaKnown RBP22.79■■□□□ 1.24
CPNE1-215ENST00000437100 RSPH4AQ5TD94 716 aa22.78■■□□□ 1.24
CPNE1-215ENST00000437100 ARHGEF40Q8TER5 1519 aa22.76■■□□□ 1.23
CPNE1-215ENST00000437100 HECW2Q9P2P5 1572 aa22.76■■□□□ 1.23
CPNE1-215ENST00000437100 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.76■■□□□ 1.237e-10■■□□□ 13.2
CPNE1-215ENST00000437100 YEATS2Q9ULM3 1422 aa22.74■■□□□ 1.23
CPNE1-215ENST00000437100 ZFYVE16Q7Z3T8 1539 aa22.74■■□□□ 1.23
CPNE1-215ENST00000437100 INO80Q9ULG1 1556 aaPredicted RBP22.74■■□□□ 1.23
CPNE1-215ENST00000437100 ABCC5O15440 1437 aa22.74■■□□□ 1.23
CPNE1-215ENST00000437100 RTEL1-TNFRSF6BF6WH68 1400 aa22.72■■□□□ 1.23
CPNE1-215ENST00000437100 SPAG9O60271 1321 aaKnown RBP22.71■■□□□ 1.23
CPNE1-215ENST00000437100 DAPK1P53355 1430 aa22.71■■□□□ 1.23
CPNE1-215ENST00000437100 SHANK2Q9UPX8 1470 aa22.71■■□□□ 1.23
CPNE1-215ENST00000437100 DNMT1P26358 1616 aaKnown RBP22.71■■□□□ 1.23
CPNE1-215ENST00000437100 ATP7AQ04656 1500 aa22.7■■□□□ 1.22
CPNE1-215ENST00000437100 MAST1Q9Y2H9 1570 aa22.7■■□□□ 1.22
CPNE1-215ENST00000437100 KIDINS220Q9ULH0 1771 aa22.7■■□□□ 1.22
CPNE1-215ENST00000437100 DIP2CQ9Y2E4 1556 aa22.68■■□□□ 1.22
CPNE1-215ENST00000437100 FAM50AQ14320 339 aaKnown RBP22.67■■□□□ 1.22
CPNE1-215ENST00000437100 ABCA6Q8N139 1617 aa22.67■■□□□ 1.22
CPNE1-215ENST00000437100 C9orf84Q5VXU9 1444 aa22.66■■□□□ 1.22
CPNE1-215ENST00000437100 CROCC2H7BZ55 1655 aa22.66■■□□□ 1.22
CPNE1-215ENST00000437100 REREQ9P2R6 1566 aa22.65■■□□□ 1.22
CPNE1-215ENST00000437100 ATP10AO60312 1499 aa22.65■■□□□ 1.22
CPNE1-215ENST00000437100 TSPY4P0CV99 314 aa22.63■■□□□ 1.21
CPNE1-215ENST00000437100 TSPY10P0CW01 314 aa22.63■■□□□ 1.21
CPNE1-215ENST00000437100 PTPRKQ15262 1439 aa22.63■■□□□ 1.21
CPNE1-215ENST00000437100 PLXNC1O60486 1568 aa22.6■■□□□ 1.21
CPNE1-215ENST00000437100 ADGRL2O95490 1459 aa22.6■■□□□ 1.21
CPNE1-215ENST00000437100 SIGLEC1Q9BZZ2 1709 aa22.59■■□□□ 1.21
CPNE1-215ENST00000437100 MYT1LQ9UL68 1186 aa22.57■■□□□ 1.2
CPNE1-215ENST00000437100 A2MP01023 1474 aa22.57■■□□□ 1.2
CPNE1-215ENST00000437100 AGLP35573 1532 aa22.57■■□□□ 1.2
CPNE1-215ENST00000437100 NCOA1Q15788 1441 aa22.55■■□□□ 1.2
CPNE1-215ENST00000437100 ADGBQ8N7X0 1667 aa22.55■■□□□ 1.2
CPNE1-215ENST00000437100 ROCK1Q13464 1354 aa22.54■■□□□ 1.2
CPNE1-215ENST00000437100 DHX29Q7Z478 1369 aaKnown RBP22.54■■□□□ 1.2
CPNE1-215ENST00000437100 ANKRD30AQ9BXX3 1397 aa22.52■■□□□ 1.2
CPNE1-215ENST00000437100 KIF15Q9NS87 1388 aa22.51■■□□□ 1.19
CPNE1-215ENST00000437100 CHIC2Q9UKJ5 165 aa22.5■■□□□ 1.19
CPNE1-215ENST00000437100 DUOX2Q9NRD8 1548 aa22.5■■□□□ 1.19
CPNE1-215ENST00000437100 ERBINQ96RT1 1412 aa22.47■■□□□ 1.19
CPNE1-215ENST00000437100 BCORL1Q5H9F3 1711 aa22.46■■□□□ 1.19
CPNE1-215ENST00000437100 RRP7BPQ9NSQ0 103 aa22.46■■□□□ 1.19
CPNE1-215ENST00000437100 ITGAEP38570 1179 aa22.45■■□□□ 1.18
CPNE1-215ENST00000437100 ARID4BQ4LE39 1312 aaPredicted RBP22.43■■□□□ 1.18
CPNE1-215ENST00000437100 EIF2AK4Q9P2K8 1649 aaKnown RBP22.42■■□□□ 1.18
CPNE1-215ENST00000437100 ADAMTSL3P82987 1691 aa22.41■■□□□ 1.18
CPNE1-215ENST00000437100 ANKRD50Q9ULJ7 1429 aa22.4■■□□□ 1.18
CPNE1-215ENST00000437100 KDM4FA0A1W2PPD8 638 aa22.39■■□□□ 1.17
CPNE1-215ENST00000437100 HFM1A2PYH4 1435 aa22.39■■□□□ 1.17
CPNE1-215ENST00000437100 RNF17Q9BXT8 1623 aaKnown RBP22.39■■□□□ 1.17
CPNE1-215ENST00000437100 NAIPQ13075 1403 aa22.38■■□□□ 1.17
CPNE1-215ENST00000437100 KIF3BO15066 747 aa22.36■■□□□ 1.17
CPNE1-215ENST00000437100 MROH1Q8NDA8 1641 aa22.35■■□□□ 1.17
CPNE1-215ENST00000437100 MLECQ14165 292 aa22.34■■□□□ 1.17
CPNE1-215ENST00000437100 GCC2Q8IWJ2 1684 aa22.33■■□□□ 1.17
CPNE1-215ENST00000437100 FAM135AQ9P2D6 1515 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms