RNA–Protein interactions for RNA: ENST00000436757.6

PITPNM1-202, Transcript of phosphatidylinositol transfer protein membrane associated 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PITPNM1, Length 4,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1-202ENST00000436757 UPF2Q9HAU5 1272 aaKnown RBP20.76■□□□□ 0.91
PITPNM1-202ENST00000436757 CYB5RLQ6IPT4 315 aa20.76■□□□□ 0.91
PITPNM1-202ENST00000436757 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
PITPNM1-202ENST00000436757 DEKP35659 375 aaKnown RBP20.74■□□□□ 0.91
PITPNM1-202ENST00000436757 U2SURPO15042 1029 aaKnown RBP20.73■□□□□ 0.91
PITPNM1-202ENST00000436757 FRAT1Q92837 279 aaPredicted RBP20.72■□□□□ 0.91
PITPNM1-202ENST00000436757 TIMELESSQ9UNS1 1208 aa20.72■□□□□ 0.91
PITPNM1-202ENST00000436757 GAPVD1Q14C86 1478 aa20.7■□□□□ 0.9
PITPNM1-202ENST00000436757 SRPK2P78362 688 aaKnown RBP20.7■□□□□ 0.9
PITPNM1-202ENST00000436757 PHLDB1Q86UU1 1377 aa20.7■□□□□ 0.9
PITPNM1-202ENST00000436757 TMF1P82094 1093 aa20.68■□□□□ 0.9
PITPNM1-202ENST00000436757 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
PITPNM1-202ENST00000436757 ANKRD30AQ9BXX3 1397 aa20.66■□□□□ 0.9
PITPNM1-202ENST00000436757 CDCA8Q53HL2 280 aa20.66■□□□□ 0.9
PITPNM1-202ENST00000436757 NUTM2FA1L443 756 aa20.65■□□□□ 0.9
PITPNM1-202ENST00000436757 ST20-MTHFSA0A0A6YYL1 179 aa20.64■□□□□ 0.89
PITPNM1-202ENST00000436757 ARAP1Q96P48 1450 aa20.64■□□□□ 0.89
PITPNM1-202ENST00000436757 SPAG9O60271 1321 aaKnown RBP20.64■□□□□ 0.89
PITPNM1-202ENST00000436757 PTPRGP23470 1445 aa20.63■□□□□ 0.89
PITPNM1-202ENST00000436757 ROCK2O75116 1388 aaKnown RBP20.61■□□□□ 0.89
PITPNM1-202ENST00000436757 CFAP53Q96M91 514 aa20.6■□□□□ 0.89
PITPNM1-202ENST00000436757 KIF21BO75037 1637 aa20.59■□□□□ 0.89
PITPNM1-202ENST00000436757 SPRYD3Q8NCJ5 442 aa20.59■□□□□ 0.89
PITPNM1-202ENST00000436757 KANK1Q14678 1352 aa20.57■□□□□ 0.88
PITPNM1-202ENST00000436757 TRAK1Q9UPV9 953 aa20.57■□□□□ 0.88
PITPNM1-202ENST00000436757 CFTRP13569 1480 aa20.56■□□□□ 0.88
PITPNM1-202ENST00000436757 PLIN1O60240 522 aa20.56■□□□□ 0.88
PITPNM1-202ENST00000436757 WASHC2CQ9Y4E1 1318 aa20.55■□□□□ 0.88
PITPNM1-202ENST00000436757 PRKRIP1Q9H875 184 aaPredicted RBP20.55■□□□□ 0.88
PITPNM1-202ENST00000436757 CCDC18Q5T9S5 1454 aa20.55■□□□□ 0.88
PITPNM1-202ENST00000436757 MORC1Q86VD1 984 aa20.54■□□□□ 0.88
PITPNM1-202ENST00000436757 TPRNQ4KMQ1 711 aa20.54■□□□□ 0.88
PITPNM1-202ENST00000436757 RCAN3Q9UKA8 241 aa20.54■□□□□ 0.88
PITPNM1-202ENST00000436757 AFAP1Q8N556 730 aa20.51■□□□□ 0.87
PITPNM1-202ENST00000436757 MAPK8IP3Q9UPT6 1336 aa20.51■□□□□ 0.87
PITPNM1-202ENST00000436757 SLC4A3P48751 1232 aa20.5■□□□□ 0.87
PITPNM1-202ENST00000436757 DDRGK1Q96HY6 314 aa20.49■□□□□ 0.87
PITPNM1-202ENST00000436757 CCDC146Q8IYE0 955 aa20.48■□□□□ 0.87
PITPNM1-202ENST00000436757 HAP1P54257 671 aaPredicted RBP20.48■□□□□ 0.87
PITPNM1-202ENST00000436757 FTSJ3Q8IY81 847 aaKnown RBP20.47■□□□□ 0.87
PITPNM1-202ENST00000436757 NUDCQ9Y266 331 aa20.47■□□□□ 0.87
PITPNM1-202ENST00000436757 CUX1P39880 1505 aa20.47■□□□□ 0.87
PITPNM1-202ENST00000436757 CCDC184Q52MB2 194 aa20.46■□□□□ 0.87
PITPNM1-202ENST00000436757 OSCARQ8IYS5 282 aa20.44■□□□□ 0.86
PITPNM1-202ENST00000436757 U2AF1L5P0DN76 240 aaPredicted RBP20.44■□□□□ 0.86
PITPNM1-202ENST00000436757 U2AF1Q01081 240 aaKnown RBP eCLIP20.44■□□□□ 0.86
PITPNM1-202ENST00000436757 CC2D2AQ9P2K1 1620 aa20.44■□□□□ 0.86
PITPNM1-202ENST00000436757 FGD6Q6ZV73 1430 aa20.43■□□□□ 0.86
PITPNM1-202ENST00000436757 EXOC6Q8TAG9 804 aa20.43■□□□□ 0.86
PITPNM1-202ENST00000436757 BICRAQ9NZM4 1560 aa20.43■□□□□ 0.86
PITPNM1-202ENST00000436757 ANP32BQ92688 251 aaKnown RBP20.42■□□□□ 0.86
PITPNM1-202ENST00000436757 SLKQ9H2G2 1235 aaPredicted RBP20.42■□□□□ 0.86
PITPNM1-202ENST00000436757 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.42■□□□□ 0.86
PITPNM1-202ENST00000436757 UNC13AQ9UPW8 1703 aa20.41■□□□□ 0.86
PITPNM1-202ENST00000436757 PANK3Q9H999 370 aa20.41■□□□□ 0.86
PITPNM1-202ENST00000436757 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
PITPNM1-202ENST00000436757 LRRC9Q6ZRR7 1453 aa20.41■□□□□ 0.86
PITPNM1-202ENST00000436757 BECN1Q14457 450 aa20.41■□□□□ 0.86
PITPNM1-202ENST00000436757 PAK3O75914 559 aaPredicted RBP20.4■□□□□ 0.86
PITPNM1-202ENST00000436757 CLUAP1Q96AJ1 413 aa20.4■□□□□ 0.86
PITPNM1-202ENST00000436757 PRXQ9BXM0 1461 aa20.39■□□□□ 0.85
PITPNM1-202ENST00000436757 WASHC2AQ641Q2 1341 aa20.39■□□□□ 0.85
PITPNM1-202ENST00000436757 RRP7AQ9Y3A4 280 aaKnown RBP20.38■□□□□ 0.85
PITPNM1-202ENST00000436757 KTN1Q86UP2 1357 aaKnown RBP20.38■□□□□ 0.85
PITPNM1-202ENST00000436757 NCLP19338 710 aaKnown RBP20.38■□□□□ 0.85
PITPNM1-202ENST00000436757 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.38■□□□□ 0.85
PITPNM1-202ENST00000436757 IPO9Q96P70 1041 aaKnown RBP20.37■□□□□ 0.85
PITPNM1-202ENST00000436757 MYH16Q9H6N6 1097 aa20.36■□□□□ 0.85
PITPNM1-202ENST00000436757 RSPH4AQ5TD94 716 aa20.36■□□□□ 0.85
PITPNM1-202ENST00000436757 TOPBP1Q92547 1522 aa20.35■□□□□ 0.85
PITPNM1-202ENST00000436757 CCDC144AA2RUR9 1427 aa20.34■□□□□ 0.85
PITPNM1-202ENST00000436757 MYOM3Q5VTT5 1437 aa20.34■□□□□ 0.85
PITPNM1-202ENST00000436757 GZF1Q9H116 711 aaPredicted RBP20.33■□□□□ 0.85
PITPNM1-202ENST00000436757 NCOA2Q15596 1464 aa20.32■□□□□ 0.84
PITPNM1-202ENST00000436757 APBB1O00213 710 aa20.31■□□□□ 0.84
PITPNM1-202ENST00000436757 BCL2L13Q9BXK5 485 aa20.31■□□□□ 0.84
PITPNM1-202ENST00000436757 KIF15Q9NS87 1388 aa20.31■□□□□ 0.84
PITPNM1-202ENST00000436757 USP47Q96K76 1375 aa20.3■□□□□ 0.84
PITPNM1-202ENST00000436757 TMEM132EQ6IEE7 984 aa20.3■□□□□ 0.84
PITPNM1-202ENST00000436757 PRG4Q92954 1404 aaPredicted RBP20.3■□□□□ 0.84
PITPNM1-202ENST00000436757 FAM69CQ0P6D2 419 aa20.3■□□□□ 0.84
PITPNM1-202ENST00000436757 KIF7Q2M1P5 1343 aa20.29■□□□□ 0.84
PITPNM1-202ENST00000436757 ERICH6BQ5W0A0 696 aa20.28■□□□□ 0.84
PITPNM1-202ENST00000436757 NLRP13Q86W25 1043 aa20.28■□□□□ 0.84
PITPNM1-202ENST00000436757 MINK1Q8N4C8 1332 aaPredicted RBP20.28■□□□□ 0.84
PITPNM1-202ENST00000436757 NBPF1Q3BBV0 1214 aa20.27■□□□□ 0.83
PITPNM1-202ENST00000436757 ZBED9Q6R2W3 1325 aa20.26■□□□□ 0.83
PITPNM1-202ENST00000436757 RALBP1Q15311 655 aa20.26■□□□□ 0.83
PITPNM1-202ENST00000436757 GRIN2BQ13224 1484 aa20.26■□□□□ 0.83
PITPNM1-202ENST00000436757 PDE4AP27815 886 aa20.26■□□□□ 0.83
PITPNM1-202ENST00000436757 CASKIN1Q8WXD9 1431 aa20.25■□□□□ 0.83
PITPNM1-202ENST00000436757 PRDM2Q13029 1718 aa20.25■□□□□ 0.83
PITPNM1-202ENST00000436757 TCERG1O14776 1098 aaKnown RBP20.25■□□□□ 0.83
PITPNM1-202ENST00000436757 NBPF8Q3BBV2 869 aa20.25■□□□□ 0.83
PITPNM1-202ENST00000436757 HDGFL2Q7Z4V5 671 aaPredicted RBP20.25■□□□□ 0.83
PITPNM1-202ENST00000436757 LTV1Q96GA3 475 aaPredicted RBP20.25■□□□□ 0.83
PITPNM1-202ENST00000436757 ELL2O00472 640 aaPredicted RBP20.25■□□□□ 0.83
PITPNM1-202ENST00000436757 TRIM44Q96DX7 344 aaPredicted RBP20.24■□□□□ 0.83
PITPNM1-202ENST00000436757 CRBNQ96SW2 442 aa20.24■□□□□ 0.83
PITPNM1-202ENST00000436757 TOP2BQ02880 1626 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms