RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 CDC42BPBQ9Y5S2 1711 aa23.01■■□□□ 1.27
TNFAIP3-204ENST00000433680 KANK4Q5T7N3 995 aaPredicted RBP23■■□□□ 1.27
TNFAIP3-204ENST00000433680 EFCAB2Q5VUJ9 269 aa23■■□□□ 1.27
TNFAIP3-204ENST00000433680 CCNB3Q8WWL7 1395 aa23■■□□□ 1.27
TNFAIP3-204ENST00000433680 NCOA2Q15596 1464 aa22.99■■□□□ 1.27
TNFAIP3-204ENST00000433680 ARHGAP5Q13017 1502 aa22.99■■□□□ 1.27
TNFAIP3-204ENST00000433680 ITSN2Q9NZM3 1697 aa22.99■■□□□ 1.27
TNFAIP3-204ENST00000433680 GPATCH8Q9UKJ3 1502 aaKnown RBP22.98■■□□□ 1.27
TNFAIP3-204ENST00000433680 AKNAQ7Z591 1439 aa22.98■■□□□ 1.27
TNFAIP3-204ENST00000433680 COL17A1Q9UMD9 1497 aaPredicted RBP22.92■■□□□ 1.26
TNFAIP3-204ENST00000433680 CFDP1Q9UEE9 299 aaPredicted RBP22.91■■□□□ 1.26
TNFAIP3-204ENST00000433680 ADGRL1O94910 1474 aa22.91■■□□□ 1.26
TNFAIP3-204ENST00000433680 DENND4BO75064 1496 aaPredicted RBP22.89■■□□□ 1.25
TNFAIP3-204ENST00000433680 SCAPERQ9BY12 1400 aa22.87■■□□□ 1.25
TNFAIP3-204ENST00000433680 PLEKHH2Q8IVE3 1493 aa22.86■■□□□ 1.25
TNFAIP3-204ENST00000433680 RICTORQ6R327 1708 aa22.85■■□□□ 1.25
TNFAIP3-204ENST00000433680 SAMD9LQ8IVG5 1584 aa22.85■■□□□ 1.25
TNFAIP3-204ENST00000433680 ABCC1P33527 1531 aa22.85■■□□□ 1.25
TNFAIP3-204ENST00000433680 MYOM3Q5VTT5 1437 aa22.84■■□□□ 1.25
TNFAIP3-204ENST00000433680 ZNF777Q9ULD5 760 aaPredicted RBP22.83■■□□□ 1.25
TNFAIP3-204ENST00000433680 MIA2Q96PC5 1412 aa22.82■■□□□ 1.24
TNFAIP3-204ENST00000433680 FRMPD1Q5SYB0 1578 aa22.82■■□□□ 1.24
TNFAIP3-204ENST00000433680 POGZQ7Z3K3 1410 aa22.82■■□□□ 1.24
TNFAIP3-204ENST00000433680 KIAA1107Q9UPP5 1409 aa22.82■■□□□ 1.24
TNFAIP3-204ENST00000433680 RAPGEF3O95398 923 aa22.81■■□□□ 1.24
TNFAIP3-204ENST00000433680 ZNF518AQ6AHZ1 1483 aa22.8■■□□□ 1.24
TNFAIP3-204ENST00000433680 ZMYM4Q5VZL5 1548 aa22.78■■□□□ 1.24
TNFAIP3-204ENST00000433680 ARHGEF12Q9NZN5 1544 aa22.77■■□□□ 1.24
TNFAIP3-204ENST00000433680 CAMSAP2Q08AD1 1489 aa22.77■■□□□ 1.24
TNFAIP3-204ENST00000433680 SYCP2Q9BX26 1530 aa22.77■■□□□ 1.24
TNFAIP3-204ENST00000433680 MAGI2Q86UL8 1455 aa22.76■■□□□ 1.23
TNFAIP3-204ENST00000433680 KDM5CP41229 1560 aa22.76■■□□□ 1.23
TNFAIP3-204ENST00000433680 ZNF644Q9H582 1327 aaPredicted RBP22.74■■□□□ 1.23
TNFAIP3-204ENST00000433680 HNRNPMP52272 730 aaKnown RBP eCLIP22.73■■□□□ 1.23
TNFAIP3-204ENST00000433680 RSPH4AQ5TD94 716 aa22.73■■□□□ 1.23
TNFAIP3-204ENST00000433680 FGD6Q6ZV73 1430 aa22.73■■□□□ 1.23
TNFAIP3-204ENST00000433680 TRAPPC8Q9Y2L5 1435 aa22.73■■□□□ 1.23
TNFAIP3-204ENST00000433680 AFAP1Q8N556 730 aa22.72■■□□□ 1.23
TNFAIP3-204ENST00000433680 PHF23Q9BUL5 403 aaPredicted RBP22.71■■□□□ 1.23
TNFAIP3-204ENST00000433680 MBD5Q9P267 1494 aa22.71■■□□□ 1.23
TNFAIP3-204ENST00000433680 PTPN23Q9H3S7 1636 aa22.71■■□□□ 1.23
TNFAIP3-204ENST00000433680 ARHGEF5Q12774 1597 aa22.7■■□□□ 1.22
TNFAIP3-204ENST00000433680 HECW2Q9P2P5 1572 aa22.69■■□□□ 1.22
TNFAIP3-204ENST00000433680 TCOF1Q13428 1488 aaKnown RBP22.69■■□□□ 1.22
TNFAIP3-204ENST00000433680 MLH3Q9UHC1 1453 aa22.69■■□□□ 1.22
TNFAIP3-204ENST00000433680 PPARGC1BQ86YN6 1023 aaKnown RBP22.69■■□□□ 1.22
TNFAIP3-204ENST00000433680 ZFYVE16Q7Z3T8 1539 aa22.67■■□□□ 1.22
TNFAIP3-204ENST00000433680 ARHGEF40Q8TER5 1519 aa22.67■■□□□ 1.22
TNFAIP3-204ENST00000433680 CCDC141Q6ZP82 1450 aa22.66■■□□□ 1.22
TNFAIP3-204ENST00000433680 SPAG9O60271 1321 aaKnown RBP22.64■■□□□ 1.22
TNFAIP3-204ENST00000433680 MYT1LQ9UL68 1186 aa22.63■■□□□ 1.21
TNFAIP3-204ENST00000433680 KIDINS220Q9ULH0 1771 aa22.62■■□□□ 1.21
TNFAIP3-204ENST00000433680 INO80Q9ULG1 1556 aaPredicted RBP22.62■■□□□ 1.21
TNFAIP3-204ENST00000433680 RTEL1-TNFRSF6BF6WH68 1400 aa22.61■■□□□ 1.21
TNFAIP3-204ENST00000433680 YEATS2Q9ULM3 1422 aa22.61■■□□□ 1.21
TNFAIP3-204ENST00000433680 ATP7AQ04656 1500 aa22.61■■□□□ 1.21
TNFAIP3-204ENST00000433680 TSPY4P0CV99 314 aa22.6■■□□□ 1.21
TNFAIP3-204ENST00000433680 TSPY10P0CW01 314 aa22.6■■□□□ 1.21
TNFAIP3-204ENST00000433680 ATP10AO60312 1499 aa22.6■■□□□ 1.21
TNFAIP3-204ENST00000433680 DIP2CQ9Y2E4 1556 aa22.58■■□□□ 1.2
TNFAIP3-204ENST00000433680 MAST1Q9Y2H9 1570 aa22.58■■□□□ 1.2
TNFAIP3-204ENST00000433680 DNMT1P26358 1616 aaKnown RBP22.57■■□□□ 1.2
TNFAIP3-204ENST00000433680 ABCA6Q8N139 1617 aa22.57■■□□□ 1.2
TNFAIP3-204ENST00000433680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.57■■□□□ 1.2
TNFAIP3-204ENST00000433680 CROCC2H7BZ55 1655 aa22.56■■□□□ 1.2
TNFAIP3-204ENST00000433680 REREQ9P2R6 1566 aa22.56■■□□□ 1.2
TNFAIP3-204ENST00000433680 C9orf84Q5VXU9 1444 aa22.56■■□□□ 1.2
TNFAIP3-204ENST00000433680 FAM50AQ14320 339 aaKnown RBP22.55■■□□□ 1.2
TNFAIP3-204ENST00000433680 SHANK2Q9UPX8 1470 aa22.54■■□□□ 1.2
TNFAIP3-204ENST00000433680 DAPK1P53355 1430 aa22.54■■□□□ 1.2
TNFAIP3-204ENST00000433680 ADGBQ8N7X0 1667 aa22.53■■□□□ 1.2
TNFAIP3-204ENST00000433680 ABCC5O15440 1437 aa22.53■■□□□ 1.2
TNFAIP3-204ENST00000433680 RRBP1Q9P2E9 1410 aaKnown RBP22.53■■□□□ 1.2
TNFAIP3-204ENST00000433680 PLXNC1O60486 1568 aa22.48■■□□□ 1.19
TNFAIP3-204ENST00000433680 A2MP01023 1474 aa22.47■■□□□ 1.19
TNFAIP3-204ENST00000433680 ARID4BQ4LE39 1312 aaPredicted RBP22.47■■□□□ 1.19
TNFAIP3-204ENST00000433680 AGLP35573 1532 aa22.47■■□□□ 1.19
TNFAIP3-204ENST00000433680 SIGLEC1Q9BZZ2 1709 aa22.45■■□□□ 1.19
TNFAIP3-204ENST00000433680 BCORL1Q5H9F3 1711 aa22.43■■□□□ 1.18
TNFAIP3-204ENST00000433680 DHX29Q7Z478 1369 aaKnown RBP22.43■■□□□ 1.18
TNFAIP3-204ENST00000433680 ANKRD30AQ9BXX3 1397 aa22.42■■□□□ 1.18
TNFAIP3-204ENST00000433680 ADGRL2O95490 1459 aa22.41■■□□□ 1.18
TNFAIP3-204ENST00000433680 DUOX2Q9NRD8 1548 aa22.39■■□□□ 1.17
TNFAIP3-204ENST00000433680 NCOA1Q15788 1441 aa22.39■■□□□ 1.17
TNFAIP3-204ENST00000433680 CHIC2Q9UKJ5 165 aa22.38■■□□□ 1.17
TNFAIP3-204ENST00000433680 ADAMTSL3P82987 1691 aa22.38■■□□□ 1.17
TNFAIP3-204ENST00000433680 KIF15Q9NS87 1388 aa22.38■■□□□ 1.17
TNFAIP3-204ENST00000433680 ROCK1Q13464 1354 aa22.37■■□□□ 1.17
TNFAIP3-204ENST00000433680 EIF2AK4Q9P2K8 1649 aaKnown RBP22.36■■□□□ 1.17
TNFAIP3-204ENST00000433680 PTPRKQ15262 1439 aa22.36■■□□□ 1.17
TNFAIP3-204ENST00000433680 KDM4FA0A1W2PPD8 638 aa22.35■■□□□ 1.17
TNFAIP3-204ENST00000433680 RRP7BPQ9NSQ0 103 aa22.35■■□□□ 1.17
TNFAIP3-204ENST00000433680 ITGAEP38570 1179 aa22.34■■□□□ 1.17
TNFAIP3-204ENST00000433680 ERBINQ96RT1 1412 aa22.33■■□□□ 1.17
TNFAIP3-204ENST00000433680 MLECQ14165 292 aa22.32■■□□□ 1.16
TNFAIP3-204ENST00000433680 FER1L4A9Z1Z3 1794 aa22.3■■□□□ 1.16
TNFAIP3-204ENST00000433680 MADDQ8WXG6 1647 aa22.3■■□□□ 1.16
TNFAIP3-204ENST00000433680 KIF3BO15066 747 aa22.29■■□□□ 1.16
TNFAIP3-204ENST00000433680 PPP6R1Q9UPN7 881 aa22.29■■□□□ 1.16
TNFAIP3-204ENST00000433680 RNF17Q9BXT8 1623 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms