RNA–Protein interactions for RNA: ENST00000433027.5

RBM39-213, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-213ENST00000433027 KCNH8Q96L42 1107 aa23.31■■□□□ 1.32
RBM39-213ENST00000433027 PLEKHH2Q8IVE3 1493 aa23.3■■□□□ 1.32
RBM39-213ENST00000433027 CDC42BPBQ9Y5S2 1711 aa23.28■■□□□ 1.32
RBM39-213ENST00000433027 RSPH4AQ5TD94 716 aa23.27■■□□□ 1.32
RBM39-213ENST00000433027 KIAA1107Q9UPP5 1409 aa23.25■■□□□ 1.31
RBM39-213ENST00000433027 FAM50AQ14320 339 aaKnown RBP23.25■■□□□ 1.31
RBM39-213ENST00000433027 EFCAB2Q5VUJ9 269 aa23.25■■□□□ 1.31
RBM39-213ENST00000433027 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
RBM39-213ENST00000433027 ARHGAP5Q13017 1502 aa23.24■■□□□ 1.31
RBM39-213ENST00000433027 CFAP74Q9C0B2 1584 aa23.23■■□□□ 1.31
RBM39-213ENST00000433027 CD109Q6YHK3 1445 aa23.21■■□□□ 1.31
RBM39-213ENST00000433027 ARHGEF5Q12774 1597 aa23.21■■□□□ 1.31
RBM39-213ENST00000433027 DIP2BQ9P265 1576 aa23.2■■□□□ 1.3
RBM39-213ENST00000433027 DNMT1P26358 1616 aaKnown RBP23.19■■□□□ 1.3
RBM39-213ENST00000433027 MAP3K4Q9Y6R4 1608 aa23.19■■□□□ 1.3
RBM39-213ENST00000433027 AKNAQ7Z591 1439 aa23.17■■□□□ 1.3
RBM39-213ENST00000433027 SAMD9LQ8IVG5 1584 aa23.17■■□□□ 1.3
RBM39-213ENST00000433027 SHANK2Q9UPX8 1470 aa23.17■■□□□ 1.3
RBM39-213ENST00000433027 FANCAO15360 1455 aa23.16■■□□□ 1.3
RBM39-213ENST00000433027 NEO1Q92859 1461 aa23.16■■□□□ 1.3
RBM39-213ENST00000433027 DAPK1P53355 1430 aa23.15■■□□□ 1.3
RBM39-213ENST00000433027 ACIN1Q9UKV3 1341 aaKnown RBP23.14■■□□□ 1.3
RBM39-213ENST00000433027 ROCK1Q13464 1354 aa23.14■■□□□ 1.29
RBM39-213ENST00000433027 MBD5Q9P267 1494 aa23.13■■□□□ 1.29
RBM39-213ENST00000433027 ABCC1P33527 1531 aa23.13■■□□□ 1.29
RBM39-213ENST00000433027 CCDC141Q6ZP82 1450 aa23.11■■□□□ 1.29
RBM39-213ENST00000433027 ABCC5O15440 1437 aa23.11■■□□□ 1.29
RBM39-213ENST00000433027 ZNF777Q9ULD5 760 aaPredicted RBP23.11■■□□□ 1.29
RBM39-213ENST00000433027 TEX14Q8IWB6 1497 aa23.11■■□□□ 1.29
RBM39-213ENST00000433027 CROCC2H7BZ55 1655 aa23.1■■□□□ 1.29
RBM39-213ENST00000433027 ZNF644Q9H582 1327 aaPredicted RBP23.09■■□□□ 1.29
RBM39-213ENST00000433027 HRCP23327 699 aa23.09■■□□□ 1.29
RBM39-213ENST00000433027 FAM69CQ0P6D2 419 aa23.08■■□□□ 1.29
RBM39-213ENST00000433027 ADGRL2O95490 1459 aa23.08■■□□□ 1.29
RBM39-213ENST00000433027 MAST1Q9Y2H9 1570 aa23.07■■□□□ 1.28
RBM39-213ENST00000433027 SYCP2Q9BX26 1530 aa23.07■■□□□ 1.28
RBM39-213ENST00000433027 HFM1A2PYH4 1435 aa23.07■■□□□ 1.28
RBM39-213ENST00000433027 TSPY4P0CV99 314 aa23.06■■□□□ 1.28
RBM39-213ENST00000433027 TSPY10P0CW01 314 aa23.06■■□□□ 1.28
RBM39-213ENST00000433027 KIF13AQ9H1H9 1805 aa23.05■■□□□ 1.28
RBM39-213ENST00000433027 ADGRL1O94910 1474 aa23.05■■□□□ 1.28
RBM39-213ENST00000433027 PTPRKQ15262 1439 aa23.04■■□□□ 1.28
RBM39-213ENST00000433027 ADGBQ8N7X0 1667 aa23.03■■□□□ 1.28
RBM39-213ENST00000433027 RTEL1-TNFRSF6BF6WH68 1400 aa23.02■■□□□ 1.28
RBM39-213ENST00000433027 ANKRD30AQ9BXX3 1397 aa23.01■■□□□ 1.27
RBM39-213ENST00000433027 C9orf84Q5VXU9 1444 aa23.01■■□□□ 1.27
RBM39-213ENST00000433027 SETD5Q9C0A6 1442 aa23.01■■□□□ 1.27
RBM39-213ENST00000433027 ITGAEP38570 1179 aa23.01■■□□□ 1.27
RBM39-213ENST00000433027 ZNF518AQ6AHZ1 1483 aa22.99■■□□□ 1.27
RBM39-213ENST00000433027 ARHGEF12Q9NZN5 1544 aa22.99■■□□□ 1.27
RBM39-213ENST00000433027 HNRNPMP52272 730 aaKnown RBP eCLIP22.99■■□□□ 1.27
RBM39-213ENST00000433027 NCOA1Q15788 1441 aa22.99■■□□□ 1.27
RBM39-213ENST00000433027 SCAPERQ9BY12 1400 aa22.99■■□□□ 1.27
RBM39-213ENST00000433027 GCC2Q8IWJ2 1684 aa22.98■■□□□ 1.27
RBM39-213ENST00000433027 NAIPQ13075 1403 aa22.97■■□□□ 1.27
RBM39-213ENST00000433027 TRHP20396 242 aaPredicted RBP22.96■■□□□ 1.27
RBM39-213ENST00000433027 PLXNC1O60486 1568 aa22.96■■□□□ 1.27
RBM39-213ENST00000433027 PPRC1Q5VV67 1664 aaKnown RBP22.96■■□□□ 1.27
RBM39-213ENST00000433027 POGZQ7Z3K3 1410 aa22.95■■□□□ 1.26
RBM39-213ENST00000433027 DENND4BO75064 1496 aaPredicted RBP22.94■■□□□ 1.26
RBM39-213ENST00000433027 KDM5CP41229 1560 aa22.93■■□□□ 1.26
RBM39-213ENST00000433027 TRAPPC8Q9Y2L5 1435 aa22.93■■□□□ 1.26
RBM39-213ENST00000433027 RAB3GAP2Q9H2M9 1393 aa22.9■■□□□ 1.26
RBM39-213ENST00000433027 MLH3Q9UHC1 1453 aa22.9■■□□□ 1.26
RBM39-213ENST00000433027 SPAG9O60271 1321 aaKnown RBP22.89■■□□□ 1.26
RBM39-213ENST00000433027 INO80Q9ULG1 1556 aaPredicted RBP22.89■■□□□ 1.25
RBM39-213ENST00000433027 AEBP2Q6ZN18 517 aaPredicted RBP22.88■■□□□ 1.25
RBM39-213ENST00000433027 CHIC2Q9UKJ5 165 aa22.88■■□□□ 1.25
RBM39-213ENST00000433027 ZFYVE16Q7Z3T8 1539 aa22.87■■□□□ 1.25
RBM39-213ENST00000433027 TSPOAP1O95153 1857 aa22.86■■□□□ 1.25
RBM39-213ENST00000433027 ATP7AQ04656 1500 aa22.86■■□□□ 1.25
RBM39-213ENST00000433027 DUOX2Q9NRD8 1548 aa22.86■■□□□ 1.25
RBM39-213ENST00000433027 KIF15Q9NS87 1388 aa22.86■■□□□ 1.25
RBM39-213ENST00000433027 MAGI2Q86UL8 1455 aa22.85■■□□□ 1.25
RBM39-213ENST00000433027 ZMYM4Q5VZL5 1548 aa22.85■■□□□ 1.25
RBM39-213ENST00000433027 RICTORQ6R327 1708 aa22.85■■□□□ 1.25
RBM39-213ENST00000433027 ANKRD50Q9ULJ7 1429 aa22.84■■□□□ 1.25
RBM39-213ENST00000433027 HECW2Q9P2P5 1572 aa22.84■■□□□ 1.25
RBM39-213ENST00000433027 ERBINQ96RT1 1412 aa22.83■■□□□ 1.25
RBM39-213ENST00000433027 AFAP1Q8N556 730 aa22.83■■□□□ 1.25
RBM39-213ENST00000433027 RRP7BPQ9NSQ0 103 aa22.83■■□□□ 1.25
RBM39-213ENST00000433027 CLSPNQ9HAW4 1339 aa22.82■■□□□ 1.24
RBM39-213ENST00000433027 KIDINS220Q9ULH0 1771 aa22.78■■□□□ 1.24
RBM39-213ENST00000433027 FRMPD1Q5SYB0 1578 aa22.76■■□□□ 1.23
RBM39-213ENST00000433027 EIF2AK4Q9P2K8 1649 aaKnown RBP22.75■■□□□ 1.23
RBM39-213ENST00000433027 DHX29Q7Z478 1369 aaKnown RBP22.74■■□□□ 1.23
RBM39-213ENST00000433027 KDM5DQ9BY66 1539 aa22.72■■□□□ 1.23
RBM39-213ENST00000433027 RAPGEF3O95398 923 aa22.71■■□□□ 1.23
RBM39-213ENST00000433027 DHX57Q6P158 1386 aaKnown RBP22.71■■□□□ 1.23
RBM39-213ENST00000433027 REREQ9P2R6 1566 aa22.7■■□□□ 1.22
RBM39-213ENST00000433027 BCORL1Q5H9F3 1711 aa22.7■■□□□ 1.22
RBM39-213ENST00000433027 A2MP01023 1474 aa22.69■■□□□ 1.22
RBM39-213ENST00000433027 CCER1Q8TC90 406 aaPredicted RBP22.68■■□□□ 1.22
RBM39-213ENST00000433027 KDM6BO15054 1643 aa22.68■■□□□ 1.22
RBM39-213ENST00000433027 UNC13BO14795 1591 aa22.67■■□□□ 1.22
RBM39-213ENST00000433027 MYT1LQ9UL68 1186 aa22.67■■□□□ 1.22
RBM39-213ENST00000433027 ABCA6Q8N139 1617 aa22.66■■□□□ 1.22
RBM39-213ENST00000433027 DIP2CQ9Y2E4 1556 aa22.66■■□□□ 1.22
RBM39-213ENST00000433027 ZEB1P37275 1124 aaPredicted RBP22.65■■□□□ 1.22
RBM39-213ENST00000433027 COL17A1Q9UMD9 1497 aaPredicted RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms