RNA–Protein interactions for RNA: ENST00000432292.7

PMS1-212, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-212ENST00000432292 PPP1R15AO75807 674 aaPredicted RBP22.93■■□□□ 1.26
PMS1-212ENST00000432292 TONSLQ96HA7 1378 aa22.92■■□□□ 1.26
PMS1-212ENST00000432292 UACAQ9BZF9 1416 aa22.91■■□□□ 1.26
PMS1-212ENST00000432292 CARMIL2Q6F5E8 1435 aa22.91■■□□□ 1.26
PMS1-212ENST00000432292 CFDP1Q9UEE9 299 aaPredicted RBP22.91■■□□□ 1.26
PMS1-212ENST00000432292 RAPGEF6Q8TEU7 1601 aa22.9■■□□□ 1.26
PMS1-212ENST00000432292 DDX10Q13206 875 aaKnown RBP22.9■■□□□ 1.26
PMS1-212ENST00000432292 NUP160Q12769 1436 aa22.88■■□□□ 1.25
PMS1-212ENST00000432292 MIA2Q96PC5 1412 aa22.85■■□□□ 1.25
PMS1-212ENST00000432292 TCOF1Q13428 1488 aaKnown RBP22.85■■□□□ 1.25
PMS1-212ENST00000432292 PLEKHD1A6NEE1 506 aa22.84■■□□□ 1.25
PMS1-212ENST00000432292 KDM6BO15054 1643 aa22.83■■□□□ 1.25
PMS1-212ENST00000432292 MPHOSPH9Q99550 1183 aa22.82■■□□□ 1.24
PMS1-212ENST00000432292 TROQ12816 1431 aaPredicted RBP22.81■■□□□ 1.24
PMS1-212ENST00000432292 TIMELESSQ9UNS1 1208 aa22.8■■□□□ 1.24
PMS1-212ENST00000432292 ABCC5O15440 1437 aa22.79■■□□□ 1.24
PMS1-212ENST00000432292 DAPK1P53355 1430 aa22.78■■□□□ 1.24
PMS1-212ENST00000432292 IRX6P78412 446 aaPredicted RBP22.75■■□□□ 1.23
PMS1-212ENST00000432292 PTPRGP23470 1445 aa22.75■■□□□ 1.23
PMS1-212ENST00000432292 KIF14Q15058 1648 aa22.74■■□□□ 1.23
PMS1-212ENST00000432292 SLC4A1APQ9BWU0 796 aaKnown RBP22.74■■□□□ 1.23
PMS1-212ENST00000432292 GPATCH8Q9UKJ3 1502 aaKnown RBP22.71■■□□□ 1.23
PMS1-212ENST00000432292 ATP10BO94823 1461 aa22.71■■□□□ 1.23
PMS1-212ENST00000432292 DENND4BO75064 1496 aaPredicted RBP22.7■■□□□ 1.22
PMS1-212ENST00000432292 CAMSAP2Q08AD1 1489 aa22.68■■□□□ 1.22
PMS1-212ENST00000432292 HNRNPMP52272 730 aaKnown RBP eCLIP22.67■■□□□ 1.224e-6■■■■□ 23.6
PMS1-212ENST00000432292 L3MBTL2Q969R5 705 aa22.67■■□□□ 1.22
PMS1-212ENST00000432292 DEKP35659 375 aaKnown RBP22.67■■□□□ 1.22
PMS1-212ENST00000432292 GCC2Q8IWJ2 1684 aa22.64■■□□□ 1.21
PMS1-212ENST00000432292 AKNAQ7Z591 1439 aa22.63■■□□□ 1.21
PMS1-212ENST00000432292 DNMT1P26358 1616 aaKnown RBP22.62■■□□□ 1.21
PMS1-212ENST00000432292 ROCK1Q13464 1354 aa22.62■■□□□ 1.21
PMS1-212ENST00000432292 ABCA8O94911 1581 aa22.61■■□□□ 1.21
PMS1-212ENST00000432292 CHD1O14646 1710 aa22.61■■□□□ 1.21
PMS1-212ENST00000432292 ANO8Q9HCE9 1232 aaPredicted RBP22.6■■□□□ 1.21
PMS1-212ENST00000432292 NCOA1Q15788 1441 aa22.59■■□□□ 1.21
PMS1-212ENST00000432292 TSPY4P0CV99 314 aa22.58■■□□□ 1.2
PMS1-212ENST00000432292 TSPY10P0CW01 314 aa22.58■■□□□ 1.2
PMS1-212ENST00000432292 FANCIQ9NVI1 1328 aa22.57■■□□□ 1.2
PMS1-212ENST00000432292 ERCC6L2Q5T890 1561 aa22.56■■□□□ 1.2
PMS1-212ENST00000432292 HSPA5P11021 654 aaKnown RBP22.56■■□□□ 1.2
PMS1-212ENST00000432292 NBR1Q14596 966 aa22.56■■□□□ 1.2
PMS1-212ENST00000432292 ZNF326Q5BKZ1 582 aaKnown RBP22.56■■□□□ 1.2
PMS1-212ENST00000432292 PKD2Q13563 968 aa22.55■■□□□ 1.2
PMS1-212ENST00000432292 ANKRD30BQ9BXX2 1392 aa22.54■■□□□ 1.2
PMS1-212ENST00000432292 ANKRD30AQ9BXX3 1397 aa22.53■■□□□ 1.2
PMS1-212ENST00000432292 KDM5BQ9UGL1 1544 aa22.53■■□□□ 1.2
PMS1-212ENST00000432292 NBPF8Q3BBV2 869 aa22.52■■□□□ 1.2
PMS1-212ENST00000432292 ABCC10Q5T3U5 1492 aa22.51■■□□□ 1.19
PMS1-212ENST00000432292 ANP32CO43423 234 aa22.5■■□□□ 1.19
PMS1-212ENST00000432292 ITSN2Q9NZM3 1697 aa22.5■■□□□ 1.19
PMS1-212ENST00000432292 ANKRD50Q9ULJ7 1429 aa22.48■■□□□ 1.19
PMS1-212ENST00000432292 NUP155O75694 1391 aa22.48■■□□□ 1.19
PMS1-212ENST00000432292 EIF4G2P78344 907 aaKnown RBP eCLIP22.48■■□□□ 1.19
PMS1-212ENST00000432292 CDC42BPAQ5VT25 1732 aa22.47■■□□□ 1.19
PMS1-212ENST00000432292 C9orf84Q5VXU9 1444 aa22.47■■□□□ 1.19
PMS1-212ENST00000432292 ADCY10Q96PN6 1610 aa22.46■■□□□ 1.19
PMS1-212ENST00000432292 PZPP20742 1482 aa22.45■■□□□ 1.18
PMS1-212ENST00000432292 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.44■■□□□ 1.184e-6■■□□□ 13.1
PMS1-212ENST00000432292 WASHC2AQ641Q2 1341 aa22.43■■□□□ 1.18
PMS1-212ENST00000432292 HNRNPUQ00839 825 aaKnown RBP eCLIP22.42■■□□□ 1.18
PMS1-212ENST00000432292 C11orf95C9JLR9 678 aaPredicted RBP22.42■■□□□ 1.18
PMS1-212ENST00000432292 KIF15Q9NS87 1388 aa22.41■■□□□ 1.18
PMS1-212ENST00000432292 CNGB1Q14028 1251 aaPredicted RBP22.41■■□□□ 1.18
PMS1-212ENST00000432292 RPRD2Q5VT52 1461 aaKnown RBP22.4■■□□□ 1.18
PMS1-212ENST00000432292 POLR3GLQ9BT43 218 aa22.4■■□□□ 1.18
PMS1-212ENST00000432292 KDM2AQ9Y2K7 1162 aa22.4■■□□□ 1.18
PMS1-212ENST00000432292 SALL2Q9Y467 1007 aaPredicted RBP22.37■■□□□ 1.17
PMS1-212ENST00000432292 ADGRL2O95490 1459 aa22.37■■□□□ 1.17
PMS1-212ENST00000432292 CCDC136Q96JN2 1154 aa22.37■■□□□ 1.17
PMS1-212ENST00000432292 MYT1LQ9UL68 1186 aa22.36■■□□□ 1.17
PMS1-212ENST00000432292 KIAA1107Q9UPP5 1409 aa22.35■■□□□ 1.17
PMS1-212ENST00000432292 CCER2I3L3R5 266 aa22.35■■□□□ 1.17
PMS1-212ENST00000432292 ARHGAP5Q13017 1502 aa22.34■■□□□ 1.17
PMS1-212ENST00000432292 MBD5Q9P267 1494 aa22.34■■□□□ 1.17
PMS1-212ENST00000432292 ADGBQ8N7X0 1667 aa22.34■■□□□ 1.17
PMS1-212ENST00000432292 RTN4Q9NQC3 1192 aaKnown RBP22.33■■□□□ 1.17
PMS1-212ENST00000432292 TEX14Q8IWB6 1497 aa22.32■■□□□ 1.16
PMS1-212ENST00000432292 CROCC2H7BZ55 1655 aa22.32■■□□□ 1.16
PMS1-212ENST00000432292 B4GALNT3Q6L9W6 998 aa22.32■■□□□ 1.16
PMS1-212ENST00000432292 PAK3O75914 559 aaPredicted RBP22.31■■□□□ 1.16
PMS1-212ENST00000432292 SHROOM2Q13796 1616 aa22.31■■□□□ 1.16
PMS1-212ENST00000432292 TTC37Q6PGP7 1564 aa22.3■■□□□ 1.16
PMS1-212ENST00000432292 SAMD9LQ8IVG5 1584 aa22.3■■□□□ 1.16
PMS1-212ENST00000432292 CDC42BPBQ9Y5S2 1711 aa22.3■■□□□ 1.16
PMS1-212ENST00000432292 ABCC2Q92887 1545 aa22.29■■□□□ 1.16
PMS1-212ENST00000432292 SYCP2Q9BX26 1530 aa22.29■■□□□ 1.16
PMS1-212ENST00000432292 RGL3Q3MIN7 710 aa22.29■■□□□ 1.16
PMS1-212ENST00000432292 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.28■■□□□ 1.16
PMS1-212ENST00000432292 CCDC141Q6ZP82 1450 aa22.28■■□□□ 1.16
PMS1-212ENST00000432292 NOP58Q9Y2X3 529 aaKnown RBP22.28■■□□□ 1.16
PMS1-212ENST00000432292 DCAF11Q8TEB1 546 aa22.26■■□□□ 1.15
PMS1-212ENST00000432292 SHANK2Q9UPX8 1470 aa22.25■■□□□ 1.15
PMS1-212ENST00000432292 RSPH4AQ5TD94 716 aa22.24■■□□□ 1.15
PMS1-212ENST00000432292 EFCAB2Q5VUJ9 269 aa22.24■■□□□ 1.15
PMS1-212ENST00000432292 AFAP1Q8N556 730 aa22.23■■□□□ 1.15
PMS1-212ENST00000432292 PREX2Q70Z35 1606 aa22.22■■□□□ 1.15
PMS1-212ENST00000432292 CCDC7Q96M83 1385 aa22.22■■□□□ 1.15
PMS1-212ENST00000432292 IL27Q8NEV9 243 aa22.21■■□□□ 1.15
PMS1-212ENST00000432292 CCDC184Q52MB2 194 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms