RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 ERCC6Q03468 1493 aa25.94■■□□□ 1.74
CHD1L-204ENST00000431239 WASHC2AQ641Q2 1341 aa25.93■■□□□ 1.74
CHD1L-204ENST00000431239 RAPGEF6Q8TEU7 1601 aa25.93■■□□□ 1.74
CHD1L-204ENST00000431239 ABCC5O15440 1437 aa25.92■■□□□ 1.74
CHD1L-204ENST00000431239 ZNF777Q9ULD5 760 aaPredicted RBP25.91■■□□□ 1.74
CHD1L-204ENST00000431239 PRG4Q92954 1404 aaPredicted RBP25.91■■□□□ 1.74
CHD1L-204ENST00000431239 CDK11AQ9UQ88 783 aaPredicted RBP25.91■■□□□ 1.74
CHD1L-204ENST00000431239 EIF4G2P78344 907 aaKnown RBP eCLIP25.89■■□□□ 1.74
CHD1L-204ENST00000431239 SLC4A1APQ9BWU0 796 aaKnown RBP25.89■■□□□ 1.73
CHD1L-204ENST00000431239 PLB1Q6P1J6 1458 aa25.88■■□□□ 1.73
CHD1L-204ENST00000431239 DNMT1P26358 1616 aaKnown RBP25.86■■□□□ 1.73
CHD1L-204ENST00000431239 CFDP1Q9UEE9 299 aaPredicted RBP25.85■■□□□ 1.73
CHD1L-204ENST00000431239 ROCK1Q13464 1354 aa25.83■■□□□ 1.73
CHD1L-204ENST00000431239 NEFLP07196 543 aa25.83■■□□□ 1.73
CHD1L-204ENST00000431239 TSHZ2Q9NRE2 1034 aa25.83■■□□□ 1.73
CHD1L-204ENST00000431239 CEP170Q5SW79 1584 aa25.82■■□□□ 1.72
CHD1L-204ENST00000431239 ANKRD30BQ9BXX2 1392 aa25.82■■□□□ 1.72
CHD1L-204ENST00000431239 NBPF8Q3BBV2 869 aa25.81■■□□□ 1.72
CHD1L-204ENST00000431239 HNRNPUQ00839 825 aaKnown RBP eCLIP25.81■■□□□ 1.72
CHD1L-204ENST00000431239 C11orf95C9JLR9 678 aaPredicted RBP25.81■■□□□ 1.72
CHD1L-204ENST00000431239 TROQ12816 1431 aaPredicted RBP25.8■■□□□ 1.72
CHD1L-204ENST00000431239 CAMSAP2Q08AD1 1489 aa25.78■■□□□ 1.72
CHD1L-204ENST00000431239 KIF14Q15058 1648 aa25.77■■□□□ 1.72
CHD1L-204ENST00000431239 RPRD2Q5VT52 1461 aaKnown RBP25.77■■□□□ 1.72
CHD1L-204ENST00000431239 MAGI1Q96QZ7 1491 aaPredicted RBP25.76■■□□□ 1.71
CHD1L-204ENST00000431239 SYNJ2O15056 1496 aa25.75■■□□□ 1.71
CHD1L-204ENST00000431239 JPH4Q96JJ6 628 aa25.75■■□□□ 1.71
CHD1L-204ENST00000431239 TEX14Q8IWB6 1497 aa25.73■■□□□ 1.71
CHD1L-204ENST00000431239 CCDC184Q52MB2 194 aa25.72■■□□□ 1.71
CHD1L-204ENST00000431239 ZNF326Q5BKZ1 582 aaKnown RBP25.72■■□□□ 1.71
CHD1L-204ENST00000431239 GPATCH8Q9UKJ3 1502 aaKnown RBP25.72■■□□□ 1.71
CHD1L-204ENST00000431239 CNTLNQ9NXG0 1405 aa25.7■■□□□ 1.7
CHD1L-204ENST00000431239 CCDC7Q96M83 1385 aa25.69■■□□□ 1.7
CHD1L-204ENST00000431239 NCOA1Q15788 1441 aa25.69■■□□□ 1.7
CHD1L-204ENST00000431239 CARMIL2Q6F5E8 1435 aa25.69■■□□□ 1.7
CHD1L-204ENST00000431239 CNGB1Q14028 1251 aaPredicted RBP25.68■■□□□ 1.7
CHD1L-204ENST00000431239 PZPP20742 1482 aa25.68■■□□□ 1.7
CHD1L-204ENST00000431239 ITSN2Q9NZM3 1697 aa25.66■■□□□ 1.7
CHD1L-204ENST00000431239 IRX6P78412 446 aaPredicted RBP25.65■■□□□ 1.7
CHD1L-204ENST00000431239 PKD2Q13563 968 aa25.64■■□□□ 1.7
CHD1L-204ENST00000431239 POLR3GLQ9BT43 218 aa25.64■■□□□ 1.69
CHD1L-204ENST00000431239 PLEKHD1A6NEE1 506 aa25.62■■□□□ 1.69
CHD1L-204ENST00000431239 FAM9BQ8IZU0 186 aa25.62■■□□□ 1.69
CHD1L-204ENST00000431239 KIF7Q2M1P5 1343 aa25.62■■□□□ 1.69
CHD1L-204ENST00000431239 PRKRIP1Q9H875 184 aaPredicted RBP25.6■■□□□ 1.69
CHD1L-204ENST00000431239 NUP160Q12769 1436 aa25.6■■□□□ 1.69
CHD1L-204ENST00000431239 ADGBQ8N7X0 1667 aa25.6■■□□□ 1.69
CHD1L-204ENST00000431239 ANKRD30AQ9BXX3 1397 aa25.59■■□□□ 1.69
CHD1L-204ENST00000431239 MRS2Q9HD23 443 aa25.58■■□□□ 1.69
CHD1L-204ENST00000431239 ADCY10Q96PN6 1610 aa25.57■■□□□ 1.68
CHD1L-204ENST00000431239 ANKRD50Q9ULJ7 1429 aa25.56■■□□□ 1.68
CHD1L-204ENST00000431239 KIAA1107Q9UPP5 1409 aa25.56■■□□□ 1.68
CHD1L-204ENST00000431239 CROCC2H7BZ55 1655 aa25.55■■□□□ 1.68
CHD1L-204ENST00000431239 SPATA31E1Q6ZUB1 1445 aa25.55■■□□□ 1.68
CHD1L-204ENST00000431239 ATP10BO94823 1461 aa25.54■■□□□ 1.68
CHD1L-204ENST00000431239 ADGRL2O95490 1459 aa25.53■■□□□ 1.68
CHD1L-204ENST00000431239 NUP155O75694 1391 aa25.52■■□□□ 1.68
CHD1L-204ENST00000431239 CDC42BPAQ5VT25 1732 aa25.52■■□□□ 1.68
CHD1L-204ENST00000431239 HNRNPMP52272 730 aaKnown RBP eCLIP25.51■■□□□ 1.673e-7■■□□□ 12.7
CHD1L-204ENST00000431239 C9orf84Q5VXU9 1444 aa25.5■■□□□ 1.67
CHD1L-204ENST00000431239 ABCA8O94911 1581 aa25.49■■□□□ 1.67
CHD1L-204ENST00000431239 USP47Q96K76 1375 aa25.48■■□□□ 1.67
CHD1L-204ENST00000431239 TSPY4P0CV99 314 aa25.48■■□□□ 1.67
CHD1L-204ENST00000431239 TSPY10P0CW01 314 aa25.48■■□□□ 1.67
CHD1L-204ENST00000431239 ABCC10Q5T3U5 1492 aa25.47■■□□□ 1.67
CHD1L-204ENST00000431239 KDM2AQ9Y2K7 1162 aa25.46■■□□□ 1.67
CHD1L-204ENST00000431239 MBD5Q9P267 1494 aa25.45■■□□□ 1.66
CHD1L-204ENST00000431239 MYT1Q01538 1121 aa25.41■■□□□ 1.66
CHD1L-204ENST00000431239 KIF15Q9NS87 1388 aa25.41■■□□□ 1.66
CHD1L-204ENST00000431239 SENP3-EIF4A1A0A087X0R7 540 aa25.41■■□□□ 1.66
CHD1L-204ENST00000431239 PTPRGP23470 1445 aa25.4■■□□□ 1.66
CHD1L-204ENST00000431239 BCORL1Q5H9F3 1711 aa25.4■■□□□ 1.66
CHD1L-204ENST00000431239 POLR1AO95602 1720 aaPredicted RBP25.4■■□□□ 1.66
CHD1L-204ENST00000431239 CARD11Q9BXL7 1154 aa25.37■■□□□ 1.65
CHD1L-204ENST00000431239 RBM19Q9Y4C8 960 aaKnown RBP25.36■■□□□ 1.65
CHD1L-204ENST00000431239 SHANK2Q9UPX8 1470 aa25.36■■□□□ 1.65
CHD1L-204ENST00000431239 DCAF11Q8TEB1 546 aa25.35■■□□□ 1.65
CHD1L-204ENST00000431239 DHX29Q7Z478 1369 aaKnown RBP25.34■■□□□ 1.65
CHD1L-204ENST00000431239 ZBED9Q6R2W3 1325 aa25.32■■□□□ 1.64
CHD1L-204ENST00000431239 KDM5CP41229 1560 aa25.32■■□□□ 1.64
CHD1L-204ENST00000431239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.29■■□□□ 1.641e-8■■□□□ 13.5
CHD1L-204ENST00000431239 ST20-MTHFSA0A0A6YYL1 179 aa25.28■■□□□ 1.64
CHD1L-204ENST00000431239 SAMD9LQ8IVG5 1584 aa25.28■■□□□ 1.64
CHD1L-204ENST00000431239 RALGAPBQ86X10 1494 aa25.26■■□□□ 1.63
CHD1L-204ENST00000431239 CCDC141Q6ZP82 1450 aa25.26■■□□□ 1.63
CHD1L-204ENST00000431239 RGL3Q3MIN7 710 aa25.26■■□□□ 1.63
CHD1L-204ENST00000431239 CDC42BPBQ9Y5S2 1711 aa25.25■■□□□ 1.63
CHD1L-204ENST00000431239 UHRF1BP1Q6BDS2 1440 aa25.24■■□□□ 1.63
CHD1L-204ENST00000431239 ARHGEF5Q12774 1597 aa25.23■■□□□ 1.63
CHD1L-204ENST00000431239 SYCP2Q9BX26 1530 aa25.22■■□□□ 1.63
CHD1L-204ENST00000431239 KDM5DQ9BY66 1539 aa25.22■■□□□ 1.63
CHD1L-204ENST00000431239 CHD1O14646 1710 aa25.21■■□□□ 1.63
CHD1L-204ENST00000431239 FAM135AQ9P2D6 1515 aa25.21■■□□□ 1.63
CHD1L-204ENST00000431239 PREX2Q70Z35 1606 aa25.21■■□□□ 1.63
CHD1L-204ENST00000431239 ARHGAP5Q13017 1502 aa25.2■■□□□ 1.63
CHD1L-204ENST00000431239 ROCK2O75116 1388 aaKnown RBP25.2■■□□□ 1.62
CHD1L-204ENST00000431239 ARHGEF12Q9NZN5 1544 aa25.2■■□□□ 1.62
CHD1L-204ENST00000431239 B4GALNT3Q6L9W6 998 aa25.19■■□□□ 1.62
CHD1L-204ENST00000431239 TTC37Q6PGP7 1564 aa25.19■■□□□ 1.62
CHD1L-204ENST00000431239 ANP32EQ9BTT0 268 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms