RNA–Protein interactions for RNA: ENST00000430715.6

RTN2-203, Transcript of reticulon 2, humanhuman

TSL 1 (best) BASIC

Gene RTN2, Length 1,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-203ENST00000430715 NCOA2Q15596 1464 aa18.21■□□□□ 0.51
RTN2-203ENST00000430715 LMTK3Q96Q04 1460 aa18.21■□□□□ 0.51
RTN2-203ENST00000430715 MYO5CQ9NQX4 1742 aa18.21■□□□□ 0.51
RTN2-203ENST00000430715 BCORL1Q5H9F3 1711 aa18.2■□□□□ 0.5
RTN2-203ENST00000430715 CDC42BPAQ5VT25 1732 aa18.2■□□□□ 0.5
RTN2-203ENST00000430715 PREX2Q70Z35 1606 aa18.19■□□□□ 0.5
RTN2-203ENST00000430715 MADDQ8WXG6 1647 aa18.19■□□□□ 0.5
RTN2-203ENST00000430715 ITSN2Q9NZM3 1697 aa18.18■□□□□ 0.5
RTN2-203ENST00000430715 CDC42BPBQ9Y5S2 1711 aa18.15■□□□□ 0.5
RTN2-203ENST00000430715 PPARGC1BQ86YN6 1023 aaKnown RBP18.14■□□□□ 0.49
RTN2-203ENST00000430715 FRMPD1Q5SYB0 1578 aa18.13■□□□□ 0.49
RTN2-203ENST00000430715 CCNB3Q8WWL7 1395 aa18.13■□□□□ 0.49
RTN2-203ENST00000430715 GPATCH8Q9UKJ3 1502 aaKnown RBP18.13■□□□□ 0.49
RTN2-203ENST00000430715 CFAP74Q9C0B2 1584 aa18.12■□□□□ 0.49
RTN2-203ENST00000430715 PLCH2O75038 1416 aa18.11■□□□□ 0.49
RTN2-203ENST00000430715 ARHGAP5Q13017 1502 aa18.1■□□□□ 0.49
RTN2-203ENST00000430715 PHLDB1Q86UU1 1377 aa18.1■□□□□ 0.49
RTN2-203ENST00000430715 RIMS1Q86UR5 1692 aaKnown RBP18.09■□□□□ 0.49
RTN2-203ENST00000430715 MYOM3Q5VTT5 1437 aa18.09■□□□□ 0.49
RTN2-203ENST00000430715 FANCAO15360 1455 aa18.07■□□□□ 0.48
RTN2-203ENST00000430715 SAMD9LQ8IVG5 1584 aa18.05■□□□□ 0.48
RTN2-203ENST00000430715 ARHGEF40Q8TER5 1519 aa18.05■□□□□ 0.48
RTN2-203ENST00000430715 SOCS7O14512 581 aa18.05■□□□□ 0.48
RTN2-203ENST00000430715 NEO1Q92859 1461 aa18.04■□□□□ 0.48
RTN2-203ENST00000430715 FGD6Q6ZV73 1430 aa18.04■□□□□ 0.48
RTN2-203ENST00000430715 PTPN23Q9H3S7 1636 aa18.03■□□□□ 0.48
RTN2-203ENST00000430715 MIA2Q96PC5 1412 aa18.03■□□□□ 0.48
RTN2-203ENST00000430715 ABCC1P33527 1531 aa18.03■□□□□ 0.48
RTN2-203ENST00000430715 ILDR2Q71H61 639 aa18.02■□□□□ 0.48
RTN2-203ENST00000430715 CFDP1Q9UEE9 299 aaPredicted RBP18.01■□□□□ 0.47
RTN2-203ENST00000430715 CAMSAP2Q08AD1 1489 aa18.01■□□□□ 0.47
RTN2-203ENST00000430715 EFCAB2Q5VUJ9 269 aa18■□□□□ 0.47
RTN2-203ENST00000430715 RICTORQ6R327 1708 aa18■□□□□ 0.47
RTN2-203ENST00000430715 SIGLEC1Q9BZZ2 1709 aa18■□□□□ 0.47
RTN2-203ENST00000430715 AKNAQ7Z591 1439 aa17.99■□□□□ 0.47
RTN2-203ENST00000430715 SYCP2Q9BX26 1530 aa17.98■□□□□ 0.47
RTN2-203ENST00000430715 RAPGEF3O95398 923 aa17.98■□□□□ 0.47
RTN2-203ENST00000430715 TCOF1Q13428 1488 aaKnown RBP17.98■□□□□ 0.47
RTN2-203ENST00000430715 PLEKHH2Q8IVE3 1493 aa17.97■□□□□ 0.47
RTN2-203ENST00000430715 CERKQ8TCT0 537 aa17.97■□□□□ 0.47
RTN2-203ENST00000430715 HSPA2P54652 639 aa17.96■□□□□ 0.47
RTN2-203ENST00000430715 ZNF777Q9ULD5 760 aaPredicted RBP17.96■□□□□ 0.47
RTN2-203ENST00000430715 RRBP1Q9P2E9 1410 aaKnown RBP17.96■□□□□ 0.47
RTN2-203ENST00000430715 ARHGEF12Q9NZN5 1544 aa17.94■□□□□ 0.46
RTN2-203ENST00000430715 ZNF644Q9H582 1327 aaPredicted RBP17.94■□□□□ 0.46
RTN2-203ENST00000430715 DISP3Q9P2K9 1392 aa17.93■□□□□ 0.46
RTN2-203ENST00000430715 KIAA1107Q9UPP5 1409 aa17.93■□□□□ 0.46
RTN2-203ENST00000430715 ARHGEF5Q12774 1597 aa17.92■□□□□ 0.46
RTN2-203ENST00000430715 SPATA31D1Q6ZQQ2 1576 aa17.92■□□□□ 0.46
RTN2-203ENST00000430715 SCAPERQ9BY12 1400 aa17.92■□□□□ 0.46
RTN2-203ENST00000430715 DNMT1P26358 1616 aaKnown RBP17.91■□□□□ 0.46
RTN2-203ENST00000430715 POGZQ7Z3K3 1410 aa17.91■□□□□ 0.46
RTN2-203ENST00000430715 CROCC2H7BZ55 1655 aa17.91■□□□□ 0.46
RTN2-203ENST00000430715 DENND4BO75064 1496 aaPredicted RBP17.91■□□□□ 0.46
RTN2-203ENST00000430715 ZMYM4Q5VZL5 1548 aa17.91■□□□□ 0.46
RTN2-203ENST00000430715 FER1L4A9Z1Z3 1794 aa17.91■□□□□ 0.46
RTN2-203ENST00000430715 MBD5Q9P267 1494 aa17.9■□□□□ 0.46
RTN2-203ENST00000430715 ARID4BQ4LE39 1312 aaPredicted RBP17.89■□□□□ 0.45
RTN2-203ENST00000430715 ZNF518AQ6AHZ1 1483 aa17.88■□□□□ 0.45
RTN2-203ENST00000430715 CCDC141Q6ZP82 1450 aa17.88■□□□□ 0.45
RTN2-203ENST00000430715 KDM5CP41229 1560 aa17.88■□□□□ 0.45
RTN2-203ENST00000430715 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.88■□□□□ 0.45
RTN2-203ENST00000430715 TRAPPC8Q9Y2L5 1435 aa17.88■□□□□ 0.45
RTN2-203ENST00000430715 PREX1Q8TCU6 1659 aa17.87■□□□□ 0.45
RTN2-203ENST00000430715 FAM50AQ14320 339 aaKnown RBP17.87■□□□□ 0.45
RTN2-203ENST00000430715 STRCQ7RTU9 1775 aa17.86■□□□□ 0.45
RTN2-203ENST00000430715 HNRNPMP52272 730 aaKnown RBP eCLIP17.86■□□□□ 0.45
RTN2-203ENST00000430715 INO80Q9ULG1 1556 aaPredicted RBP17.84■□□□□ 0.45
RTN2-203ENST00000430715 DAPK1P53355 1430 aa17.84■□□□□ 0.45
RTN2-203ENST00000430715 MAST1Q9Y2H9 1570 aa17.83■□□□□ 0.45
RTN2-203ENST00000430715 ZFYVE16Q7Z3T8 1539 aa17.83■□□□□ 0.45
RTN2-203ENST00000430715 SHANK2Q9UPX8 1470 aa17.83■□□□□ 0.45
RTN2-203ENST00000430715 ABCC5O15440 1437 aa17.82■□□□□ 0.44
RTN2-203ENST00000430715 YEATS2Q9ULM3 1422 aa17.82■□□□□ 0.44
RTN2-203ENST00000430715 ADGBQ8N7X0 1667 aa17.82■□□□□ 0.44
RTN2-203ENST00000430715 AFAP1Q8N556 730 aa17.8■□□□□ 0.44
RTN2-203ENST00000430715 ATP7AQ04656 1500 aa17.8■□□□□ 0.44
RTN2-203ENST00000430715 KIDINS220Q9ULH0 1771 aa17.8■□□□□ 0.44
RTN2-203ENST00000430715 RSPH4AQ5TD94 716 aa17.79■□□□□ 0.44
RTN2-203ENST00000430715 C9orf84Q5VXU9 1444 aa17.79■□□□□ 0.44
RTN2-203ENST00000430715 MLH3Q9UHC1 1453 aa17.78■□□□□ 0.44
RTN2-203ENST00000430715 ABCA6Q8N139 1617 aa17.78■□□□□ 0.44
RTN2-203ENST00000430715 PLXNC1O60486 1568 aa17.78■□□□□ 0.44
RTN2-203ENST00000430715 MAGI2Q86UL8 1455 aa17.77■□□□□ 0.44
RTN2-203ENST00000430715 PTPRKQ15262 1439 aa17.77■□□□□ 0.44
RTN2-203ENST00000430715 SPAG9O60271 1321 aaKnown RBP17.76■□□□□ 0.43
RTN2-203ENST00000430715 DIP2CQ9Y2E4 1556 aa17.76■□□□□ 0.43
RTN2-203ENST00000430715 ADGRL2O95490 1459 aa17.75■□□□□ 0.43
RTN2-203ENST00000430715 RTEL1-TNFRSF6BF6WH68 1400 aa17.75■□□□□ 0.43
RTN2-203ENST00000430715 PLPPR3Q6T4P5 718 aa17.75■□□□□ 0.43
RTN2-203ENST00000430715 TSPY4P0CV99 314 aa17.74■□□□□ 0.43
RTN2-203ENST00000430715 TSPY10P0CW01 314 aa17.74■□□□□ 0.43
RTN2-203ENST00000430715 ITGAEP38570 1179 aa17.74■□□□□ 0.43
RTN2-203ENST00000430715 LTBP4Q8N2S1 1624 aa17.72■□□□□ 0.43
RTN2-203ENST00000430715 SETD1BQ9UPS6 1966 aaKnown RBP17.7■□□□□ 0.42
RTN2-203ENST00000430715 MYT1LQ9UL68 1186 aa17.7■□□□□ 0.42
RTN2-203ENST00000430715 GCC2Q8IWJ2 1684 aa17.69■□□□□ 0.42
RTN2-203ENST00000430715 CHIC2Q9UKJ5 165 aa17.69■□□□□ 0.42
RTN2-203ENST00000430715 REREQ9P2R6 1566 aa17.69■□□□□ 0.42
RTN2-203ENST00000430715 ROCK1Q13464 1354 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms