RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 FYCO1Q9BQS8 1478 aa19.36■□□□□ 0.69
SYNGAP1-203ENST00000428982 ABCA5Q8WWZ7 1642 aa19.36■□□□□ 0.69
SYNGAP1-203ENST00000428982 PPM1GO15355 546 aaPredicted RBP19.35■□□□□ 0.69
SYNGAP1-203ENST00000428982 EIF4G3O43432 1585 aaKnown RBP19.34■□□□□ 0.69
SYNGAP1-203ENST00000428982 PRG4Q92954 1404 aaPredicted RBP19.34■□□□□ 0.69
SYNGAP1-203ENST00000428982 RRP7BPQ9NSQ0 103 aa19.34■□□□□ 0.69
SYNGAP1-203ENST00000428982 IPO9Q96P70 1041 aaKnown RBP19.33■□□□□ 0.69
SYNGAP1-203ENST00000428982 TARBP1Q13395 1621 aaKnown RBP19.33■□□□□ 0.68
SYNGAP1-203ENST00000428982 HNRNPUQ00839 825 aaKnown RBP eCLIP19.33■□□□□ 0.68
SYNGAP1-203ENST00000428982 NAP1L5Q96NT1 182 aaPredicted RBP19.32■□□□□ 0.68
SYNGAP1-203ENST00000428982 ADAMTS12P58397 1594 aa19.32■□□□□ 0.68
SYNGAP1-203ENST00000428982 HSP90AA2PQ14568 343 aaPredicted RBP19.32■□□□□ 0.68
SYNGAP1-203ENST00000428982 PAK3O75914 559 aaPredicted RBP19.31■□□□□ 0.68
SYNGAP1-203ENST00000428982 WDR97A6NE52 1622 aa19.3■□□□□ 0.68
SYNGAP1-203ENST00000428982 MAP3K1Q13233 1512 aa19.29■□□□□ 0.68
SYNGAP1-203ENST00000428982 PBRM1Q86U86 1689 aa19.28■□□□□ 0.68
SYNGAP1-203ENST00000428982 LRRC9Q6ZRR7 1453 aa19.28■□□□□ 0.68
SYNGAP1-203ENST00000428982 USP35Q9P2H5 1018 aa19.28■□□□□ 0.68
SYNGAP1-203ENST00000428982 HSP90AA1P07900 732 aaKnown RBP19.27■□□□□ 0.67
SYNGAP1-203ENST00000428982 SIN3AQ96ST3 1273 aa19.27■□□□□ 0.67
SYNGAP1-203ENST00000428982 BRPF3Q9ULD4 1205 aa19.27■□□□□ 0.67
SYNGAP1-203ENST00000428982 CTTNBP2Q8WZ74 1663 aa19.25■□□□□ 0.67
SYNGAP1-203ENST00000428982 B4GALNT3Q6L9W6 998 aa19.25■□□□□ 0.67
SYNGAP1-203ENST00000428982 THOC2Q8NI27 1593 aaKnown RBP19.24■□□□□ 0.67
SYNGAP1-203ENST00000428982 PPP1R15AO75807 674 aaPredicted RBP19.24■□□□□ 0.67
SYNGAP1-203ENST00000428982 PDE4CQ08493 712 aa19.21■□□□□ 0.67
SYNGAP1-203ENST00000428982 HECW1Q76N89 1606 aa19.21■□□□□ 0.67
SYNGAP1-203ENST00000428982 TIAM1Q13009 1591 aa19.21■□□□□ 0.67
SYNGAP1-203ENST00000428982 PCF11O94913 1555 aaKnown RBP19.19■□□□□ 0.66
SYNGAP1-203ENST00000428982 EIF4G2P78344 907 aaKnown RBP eCLIP19.16■□□□□ 0.66
SYNGAP1-203ENST00000428982 GSE1Q14687 1217 aa19.16■□□□□ 0.66
SYNGAP1-203ENST00000428982 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.16■□□□□ 0.661e-6■■■■□ 21.3
SYNGAP1-203ENST00000428982 EFCAB2Q5VUJ9 269 aa19.15■□□□□ 0.66
SYNGAP1-203ENST00000428982 PHLDB1Q86UU1 1377 aa19.15■□□□□ 0.66
SYNGAP1-203ENST00000428982 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.14■□□□□ 0.66
SYNGAP1-203ENST00000428982 SLC4A1APQ9BWU0 796 aaKnown RBP19.14■□□□□ 0.65
SYNGAP1-203ENST00000428982 MYOM3Q5VTT5 1437 aa19.13■□□□□ 0.65
SYNGAP1-203ENST00000428982 NCOA2Q15596 1464 aa19.13■□□□□ 0.65
SYNGAP1-203ENST00000428982 EHBP1L1Q8N3D4 1523 aa19.12■□□□□ 0.65
SYNGAP1-203ENST00000428982 FGD6Q6ZV73 1430 aa19.12■□□□□ 0.65
SYNGAP1-203ENST00000428982 EPRSP07814 1512 aaKnown RBP19.11■□□□□ 0.65
SYNGAP1-203ENST00000428982 UGGT2Q9NYU1 1516 aa19.1■□□□□ 0.65
SYNGAP1-203ENST00000428982 ZNF326Q5BKZ1 582 aaKnown RBP19.1■□□□□ 0.65
SYNGAP1-203ENST00000428982 CYB5RLQ6IPT4 315 aa19.09■□□□□ 0.65
SYNGAP1-203ENST00000428982 HIRIP3Q9BW71 556 aaPredicted RBP19.08■□□□□ 0.65
SYNGAP1-203ENST00000428982 NUP160Q12769 1436 aa19.08■□□□□ 0.65
SYNGAP1-203ENST00000428982 PNNQ9H307 717 aaKnown RBP19.07■□□□□ 0.64
SYNGAP1-203ENST00000428982 UACAQ9BZF9 1416 aa19.07■□□□□ 0.64
SYNGAP1-203ENST00000428982 RSPH4AQ5TD94 716 aa19.06■□□□□ 0.64
SYNGAP1-203ENST00000428982 PLB1Q6P1J6 1458 aa19.06■□□□□ 0.64
SYNGAP1-203ENST00000428982 CDK13Q14004 1512 aaKnown RBP19.06■□□□□ 0.64
SYNGAP1-203ENST00000428982 FAM43AQ8N2R8 423 aa19.06■□□□□ 0.64
SYNGAP1-203ENST00000428982 TROQ12816 1431 aaPredicted RBP19.06■□□□□ 0.64
SYNGAP1-203ENST00000428982 ANKRD30AQ9BXX3 1397 aa19.04■□□□□ 0.64
SYNGAP1-203ENST00000428982 C11orf95C9JLR9 678 aaPredicted RBP19.04■□□□□ 0.64
SYNGAP1-203ENST00000428982 POLR3GLQ9BT43 218 aa19.04■□□□□ 0.64
SYNGAP1-203ENST00000428982 DDRGK1Q96HY6 314 aa19.03■□□□□ 0.64
SYNGAP1-203ENST00000428982 HNRNPMP52272 730 aaKnown RBP eCLIP19.03■□□□□ 0.64
SYNGAP1-203ENST00000428982 KIAA0556O60303 1618 aa19.02■□□□□ 0.64
SYNGAP1-203ENST00000428982 SUPT6HQ7KZ85 1726 aaKnown RBP19.02■□□□□ 0.64
SYNGAP1-203ENST00000428982 ESF1Q9H501 851 aaKnown RBP19.01■□□□□ 0.63
SYNGAP1-203ENST00000428982 RRP9O43818 475 aaKnown RBP19.01■□□□□ 0.63
SYNGAP1-203ENST00000428982 RBM10P98175 930 aaKnown RBP19■□□□□ 0.63
SYNGAP1-203ENST00000428982 MRS2Q9HD23 443 aa18.99■□□□□ 0.63
SYNGAP1-203ENST00000428982 ARXQ96QS3 562 aa18.98■□□□□ 0.63
SYNGAP1-203ENST00000428982 ARID4BQ4LE39 1312 aaPredicted RBP18.97■□□□□ 0.63
SYNGAP1-203ENST00000428982 CEP170Q5SW79 1584 aa18.97■□□□□ 0.63
SYNGAP1-203ENST00000428982 MIA2Q96PC5 1412 aa18.96■□□□□ 0.63
SYNGAP1-203ENST00000428982 RAPGEF6Q8TEU7 1601 aa18.95■□□□□ 0.62
SYNGAP1-203ENST00000428982 PDIA4P13667 645 aaKnown RBP18.95■□□□□ 0.62
SYNGAP1-203ENST00000428982 SAMD9Q5K651 1589 aa18.95■□□□□ 0.62
SYNGAP1-203ENST00000428982 ZNF644Q9H582 1327 aaPredicted RBP18.95■□□□□ 0.62
SYNGAP1-203ENST00000428982 FAM9BQ8IZU0 186 aa18.94■□□□□ 0.62
SYNGAP1-203ENST00000428982 DISP1Q96F81 1524 aa18.94■□□□□ 0.62
SYNGAP1-203ENST00000428982 MAPKBP1O60336 1514 aa18.93■□□□□ 0.62
SYNGAP1-203ENST00000428982 HSPA5P11021 654 aaKnown RBP18.92■□□□□ 0.62
SYNGAP1-203ENST00000428982 SPAG9O60271 1321 aaKnown RBP18.92■□□□□ 0.62
SYNGAP1-203ENST00000428982 HFM1A2PYH4 1435 aa18.9■□□□□ 0.62
SYNGAP1-203ENST00000428982 FRAT1Q92837 279 aaPredicted RBP18.9■□□□□ 0.62
SYNGAP1-203ENST00000428982 CHGAP10645 457 aaKnown RBP18.9■□□□□ 0.62
SYNGAP1-203ENST00000428982 WASHC2AQ641Q2 1341 aa18.9■□□□□ 0.62
SYNGAP1-203ENST00000428982 NUP153P49790 1475 aaKnown RBP18.89■□□□□ 0.61
SYNGAP1-203ENST00000428982 NCLP19338 710 aaKnown RBP18.88■□□□□ 0.61
SYNGAP1-203ENST00000428982 ARHGAP5Q13017 1502 aa18.87■□□□□ 0.61
SYNGAP1-203ENST00000428982 MPHOSPH9Q99550 1183 aa18.86■□□□□ 0.61
SYNGAP1-203ENST00000428982 TRHP20396 242 aaPredicted RBP18.86■□□□□ 0.61
SYNGAP1-203ENST00000428982 FGD1P98174 961 aa18.86■□□□□ 0.61
SYNGAP1-203ENST00000428982 L1TD1Q5T7N2 865 aaKnown RBP18.86■□□□□ 0.61
SYNGAP1-203ENST00000428982 KANK1Q14678 1352 aa18.86■□□□□ 0.61
SYNGAP1-203ENST00000428982 NUP155O75694 1391 aa18.85■□□□□ 0.61
SYNGAP1-203ENST00000428982 WASHC2CQ9Y4E1 1318 aa18.85■□□□□ 0.61
SYNGAP1-203ENST00000428982 TNNT2P45379 298 aaPredicted RBP18.85■□□□□ 0.61
SYNGAP1-203ENST00000428982 CFAP43Q8NDM7 1665 aa18.85■□□□□ 0.61
SYNGAP1-203ENST00000428982 KIF14Q15058 1648 aa18.84■□□□□ 0.61
SYNGAP1-203ENST00000428982 STAG3Q9UJ98 1225 aa18.83■□□□□ 0.6
SYNGAP1-203ENST00000428982 KDM2AQ9Y2K7 1162 aa18.83■□□□□ 0.6
SYNGAP1-203ENST00000428982 PKD2Q13563 968 aa18.82■□□□□ 0.6
SYNGAP1-203ENST00000428982 CHD1O14646 1710 aa18.82■□□□□ 0.6
SYNGAP1-203ENST00000428982 ATP10BO94823 1461 aa18.82■□□□□ 0.6
SYNGAP1-203ENST00000428982 ARHGEF11O15085 1522 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms