RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 ARHGAP5Q13017 1502 aa18.34■□□□□ 0.53
RFC4-206ENST00000427785 KCNH8Q96L42 1107 aa18.34■□□□□ 0.53
RFC4-206ENST00000427785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.32■□□□□ 0.52
RFC4-206ENST00000427785 ITGAEP38570 1179 aa18.3■□□□□ 0.52
RFC4-206ENST00000427785 ADGBQ8N7X0 1667 aa18.3■□□□□ 0.52
RFC4-206ENST00000427785 DIP2BQ9P265 1576 aa18.3■□□□□ 0.52
RFC4-206ENST00000427785 CFDP1Q9UEE9 299 aaPredicted RBP18.28■□□□□ 0.52
RFC4-206ENST00000427785 ARAP3Q8WWN8 1544 aa18.28■□□□□ 0.52
RFC4-206ENST00000427785 MAP3K4Q9Y6R4 1608 aa18.27■□□□□ 0.52
RFC4-206ENST00000427785 KIF13AQ9H1H9 1805 aa18.27■□□□□ 0.52
RFC4-206ENST00000427785 GCC2Q8IWJ2 1684 aa18.27■□□□□ 0.52
RFC4-206ENST00000427785 SYCP2Q9BX26 1530 aa18.27■□□□□ 0.51
RFC4-206ENST00000427785 ZNF644Q9H582 1327 aaPredicted RBP18.26■□□□□ 0.51
RFC4-206ENST00000427785 ABCC1P33527 1531 aa18.25■□□□□ 0.51
RFC4-206ENST00000427785 ZNF777Q9ULD5 760 aaPredicted RBP18.25■□□□□ 0.51
RFC4-206ENST00000427785 ARHGEF5Q12774 1597 aa18.25■□□□□ 0.51
RFC4-206ENST00000427785 PLCH2O75038 1416 aa18.24■□□□□ 0.51
RFC4-206ENST00000427785 DAPK1P53355 1430 aa18.24■□□□□ 0.51
RFC4-206ENST00000427785 PTPRKQ15262 1439 aa18.24■□□□□ 0.51
RFC4-206ENST00000427785 CFAP74Q9C0B2 1584 aa18.24■□□□□ 0.51
RFC4-206ENST00000427785 TSPOAP1O95153 1857 aa18.24■□□□□ 0.51
RFC4-206ENST00000427785 GLI2P10070 1586 aa18.23■□□□□ 0.51
RFC4-206ENST00000427785 ABCC5O15440 1437 aa18.2■□□□□ 0.5
RFC4-206ENST00000427785 PPRC1Q5VV67 1664 aaKnown RBP18.19■□□□□ 0.5
RFC4-206ENST00000427785 FANCAO15360 1455 aa18.19■□□□□ 0.5
RFC4-206ENST00000427785 PLEKHH2Q8IVE3 1493 aa18.18■□□□□ 0.5
RFC4-206ENST00000427785 CCDC141Q6ZP82 1450 aa18.17■□□□□ 0.5
RFC4-206ENST00000427785 SHANK2Q9UPX8 1470 aa18.17■□□□□ 0.5
RFC4-206ENST00000427785 CD109Q6YHK3 1445 aa18.16■□□□□ 0.5
RFC4-206ENST00000427785 MBD5Q9P267 1494 aa18.16■□□□□ 0.5
RFC4-206ENST00000427785 ARHGEF12Q9NZN5 1544 aa18.16■□□□□ 0.5
RFC4-206ENST00000427785 MAST1Q9Y2H9 1570 aa18.14■□□□□ 0.49
RFC4-206ENST00000427785 AKNAQ7Z591 1439 aa18.14■□□□□ 0.49
RFC4-206ENST00000427785 DNAJC5Q9H3Z4 198 aa18.13■□□□□ 0.49
RFC4-206ENST00000427785 HFM1A2PYH4 1435 aa18.13■□□□□ 0.49
RFC4-206ENST00000427785 ADGRL1O94910 1474 aa18.13■□□□□ 0.49
RFC4-206ENST00000427785 KDM6BO15054 1643 aa18.12■□□□□ 0.49
RFC4-206ENST00000427785 EFCAB2Q5VUJ9 269 aa18.12■□□□□ 0.49
RFC4-206ENST00000427785 CHIC2Q9UKJ5 165 aa18.12■□□□□ 0.49
RFC4-206ENST00000427785 C9orf84Q5VXU9 1444 aa18.12■□□□□ 0.49
RFC4-206ENST00000427785 KIAA1107Q9UPP5 1409 aa18.12■□□□□ 0.49
RFC4-206ENST00000427785 ADGRL2O95490 1459 aa18.12■□□□□ 0.49
RFC4-206ENST00000427785 SETD5Q9C0A6 1442 aa18.11■□□□□ 0.49
RFC4-206ENST00000427785 NAIPQ13075 1403 aa18.1■□□□□ 0.49
RFC4-206ENST00000427785 RAB3GAP2Q9H2M9 1393 aa18.1■□□□□ 0.49
RFC4-206ENST00000427785 HNRNPMP52272 730 aaKnown RBP eCLIP18.1■□□□□ 0.49
RFC4-206ENST00000427785 PLXNC1O60486 1568 aa18.09■□□□□ 0.49
RFC4-206ENST00000427785 INO80Q9ULG1 1556 aaPredicted RBP18.08■□□□□ 0.49
RFC4-206ENST00000427785 TRAPPC8Q9Y2L5 1435 aa18.08■□□□□ 0.49
RFC4-206ENST00000427785 ZFYVE16Q7Z3T8 1539 aa18.08■□□□□ 0.48
RFC4-206ENST00000427785 ROCK1Q13464 1354 aa18.07■□□□□ 0.48
RFC4-206ENST00000427785 NEO1Q92859 1461 aa18.07■□□□□ 0.48
RFC4-206ENST00000427785 RICTORQ6R327 1708 aa18.06■□□□□ 0.48
RFC4-206ENST00000427785 FAM69CQ0P6D2 419 aa18.06■□□□□ 0.48
RFC4-206ENST00000427785 RRP7BPQ9NSQ0 103 aa18.06■□□□□ 0.48
RFC4-206ENST00000427785 SCAPERQ9BY12 1400 aa18.05■□□□□ 0.48
RFC4-206ENST00000427785 ATP7AQ04656 1500 aa18.03■□□□□ 0.48
RFC4-206ENST00000427785 KDM5CP41229 1560 aa18.03■□□□□ 0.48
RFC4-206ENST00000427785 FRMPD1Q5SYB0 1578 aa18.03■□□□□ 0.48
RFC4-206ENST00000427785 KIDINS220Q9ULH0 1771 aa18.02■□□□□ 0.48
RFC4-206ENST00000427785 NCOA1Q15788 1441 aa18.02■□□□□ 0.48
RFC4-206ENST00000427785 POGZQ7Z3K3 1410 aa18.02■□□□□ 0.48
RFC4-206ENST00000427785 ANKRD30AQ9BXX3 1397 aa18.02■□□□□ 0.47
RFC4-206ENST00000427785 TEX14Q8IWB6 1497 aa18.01■□□□□ 0.47
RFC4-206ENST00000427785 HECW2Q9P2P5 1572 aa18.01■□□□□ 0.47
RFC4-206ENST00000427785 ZNF518AQ6AHZ1 1483 aa18■□□□□ 0.47
RFC4-206ENST00000427785 KIF15Q9NS87 1388 aa17.98■□□□□ 0.47
RFC4-206ENST00000427785 TSPY4P0CV99 314 aa17.97■□□□□ 0.47
RFC4-206ENST00000427785 TSPY10P0CW01 314 aa17.97■□□□□ 0.47
RFC4-206ENST00000427785 RSPH4AQ5TD94 716 aa17.97■□□□□ 0.47
RFC4-206ENST00000427785 ABCA6Q8N139 1617 aa17.97■□□□□ 0.47
RFC4-206ENST00000427785 DENND4BO75064 1496 aaPredicted RBP17.96■□□□□ 0.47
RFC4-206ENST00000427785 DHX57Q6P158 1386 aaKnown RBP17.96■□□□□ 0.47
RFC4-206ENST00000427785 CCER1Q8TC90 406 aaPredicted RBP17.96■□□□□ 0.47
RFC4-206ENST00000427785 DUOX2Q9NRD8 1548 aa17.95■□□□□ 0.46
RFC4-206ENST00000427785 AFAP1Q8N556 730 aa17.94■□□□□ 0.46
RFC4-206ENST00000427785 ANKRD50Q9ULJ7 1429 aa17.94■□□□□ 0.46
RFC4-206ENST00000427785 SPAG9O60271 1321 aaKnown RBP17.94■□□□□ 0.46
RFC4-206ENST00000427785 UNC13BO14795 1591 aa17.93■□□□□ 0.46
RFC4-206ENST00000427785 RTEL1-TNFRSF6BF6WH68 1400 aa17.93■□□□□ 0.46
RFC4-206ENST00000427785 ZMYM4Q5VZL5 1548 aa17.93■□□□□ 0.46
RFC4-206ENST00000427785 DIP2CQ9Y2E4 1556 aa17.91■□□□□ 0.46
RFC4-206ENST00000427785 EIF2AK4Q9P2K8 1649 aaKnown RBP17.9■□□□□ 0.46
RFC4-206ENST00000427785 ERBINQ96RT1 1412 aa17.89■□□□□ 0.45
RFC4-206ENST00000427785 MLH3Q9UHC1 1453 aa17.88■□□□□ 0.45
RFC4-206ENST00000427785 HRCP23327 699 aa17.87■□□□□ 0.45
RFC4-206ENST00000427785 KDM5DQ9BY66 1539 aa17.87■□□□□ 0.45
RFC4-206ENST00000427785 DEPDC5O75140 1603 aa17.87■□□□□ 0.45
RFC4-206ENST00000427785 RAPGEF3O95398 923 aa17.86■□□□□ 0.45
RFC4-206ENST00000427785 PZPP20742 1482 aa17.85■□□□□ 0.45
RFC4-206ENST00000427785 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
RFC4-206ENST00000427785 IQGAP3Q86VI3 1631 aa17.84■□□□□ 0.45
RFC4-206ENST00000427785 TRIM52Q96A61 297 aa17.84■□□□□ 0.45
RFC4-206ENST00000427785 BCORL1Q5H9F3 1711 aa17.84■□□□□ 0.45
RFC4-206ENST00000427785 ARHGEF40Q8TER5 1519 aa17.83■□□□□ 0.45
RFC4-206ENST00000427785 MAGI2Q86UL8 1455 aa17.83■□□□□ 0.45
RFC4-206ENST00000427785 TRHP20396 242 aaPredicted RBP17.83■□□□□ 0.44
RFC4-206ENST00000427785 RNF17Q9BXT8 1623 aaKnown RBP17.83■□□□□ 0.44
RFC4-206ENST00000427785 COL17A1Q9UMD9 1497 aaPredicted RBP17.82■□□□□ 0.44
RFC4-206ENST00000427785 MROH1Q8NDA8 1641 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms