RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 MYO5CQ9NQX4 1742 aa19.57■□□□□ 0.72
SMIM12-203ENST00000426886 PHLDB1Q86UU1 1377 aa19.56■□□□□ 0.72
SMIM12-203ENST00000426886 GPATCH8Q9UKJ3 1502 aaKnown RBP19.56■□□□□ 0.72
SMIM12-203ENST00000426886 SCAPERQ9BY12 1400 aa19.56■□□□□ 0.72
SMIM12-203ENST00000426886 ADGRL1O94910 1474 aa19.55■□□□□ 0.72
SMIM12-203ENST00000426886 NCOA2Q15596 1464 aa19.55■□□□□ 0.72
SMIM12-203ENST00000426886 ARAP3Q8WWN8 1544 aa19.55■□□□□ 0.72
SMIM12-203ENST00000426886 ZNF644Q9H582 1327 aaPredicted RBP19.54■□□□□ 0.72
SMIM12-203ENST00000426886 AFAP1Q8N556 730 aa19.53■□□□□ 0.72
SMIM12-203ENST00000426886 MAP3K1Q13233 1512 aa19.53■□□□□ 0.72
SMIM12-203ENST00000426886 DENND4BO75064 1496 aaPredicted RBP19.53■□□□□ 0.72
SMIM12-203ENST00000426886 MYT1LQ9UL68 1186 aa19.52■□□□□ 0.72
SMIM12-203ENST00000426886 HNRNPMP52272 730 aaKnown RBP eCLIP19.52■□□□□ 0.71
SMIM12-203ENST00000426886 CDC42BPBQ9Y5S2 1711 aa19.51■□□□□ 0.71
SMIM12-203ENST00000426886 CDC42BPAQ5VT25 1732 aa19.5■□□□□ 0.71
SMIM12-203ENST00000426886 SUPT6HQ7KZ85 1726 aaKnown RBP19.49■□□□□ 0.71
SMIM12-203ENST00000426886 PREX2Q70Z35 1606 aa19.49■□□□□ 0.71
SMIM12-203ENST00000426886 CFAP74Q9C0B2 1584 aa19.48■□□□□ 0.71
SMIM12-203ENST00000426886 ARHGEF12Q9NZN5 1544 aa19.45■□□□□ 0.7
SMIM12-203ENST00000426886 TRAPPC8Q9Y2L5 1435 aa19.44■□□□□ 0.7
SMIM12-203ENST00000426886 POGZQ7Z3K3 1410 aa19.43■□□□□ 0.7
SMIM12-203ENST00000426886 FRMPD1Q5SYB0 1578 aa19.43■□□□□ 0.7
SMIM12-203ENST00000426886 SAMD9LQ8IVG5 1584 aa19.42■□□□□ 0.7
SMIM12-203ENST00000426886 SYCP2Q9BX26 1530 aa19.4■□□□□ 0.7
SMIM12-203ENST00000426886 ABCC1P33527 1531 aa19.39■□□□□ 0.7
SMIM12-203ENST00000426886 RICTORQ6R327 1708 aa19.39■□□□□ 0.7
SMIM12-203ENST00000426886 ARID4BQ4LE39 1312 aaPredicted RBP19.39■□□□□ 0.69
SMIM12-203ENST00000426886 YEATS2Q9ULM3 1422 aa19.39■□□□□ 0.69
SMIM12-203ENST00000426886 ZNF518AQ6AHZ1 1483 aa19.39■□□□□ 0.69
SMIM12-203ENST00000426886 MYOM3Q5VTT5 1437 aa19.39■□□□□ 0.69
SMIM12-203ENST00000426886 ITSN2Q9NZM3 1697 aa19.37■□□□□ 0.69
SMIM12-203ENST00000426886 SPAG9O60271 1321 aaKnown RBP19.35■□□□□ 0.69
SMIM12-203ENST00000426886 KIAA1107Q9UPP5 1409 aa19.35■□□□□ 0.69
SMIM12-203ENST00000426886 CAMSAP2Q08AD1 1489 aa19.35■□□□□ 0.69
SMIM12-203ENST00000426886 PLEKHH2Q8IVE3 1493 aa19.35■□□□□ 0.69
SMIM12-203ENST00000426886 FAM50AQ14320 339 aaKnown RBP19.34■□□□□ 0.69
SMIM12-203ENST00000426886 MLECQ14165 292 aa19.32■□□□□ 0.68
SMIM12-203ENST00000426886 MBD5Q9P267 1494 aa19.32■□□□□ 0.68
SMIM12-203ENST00000426886 ZFYVE16Q7Z3T8 1539 aa19.31■□□□□ 0.68
SMIM12-203ENST00000426886 MIA2Q96PC5 1412 aa19.31■□□□□ 0.68
SMIM12-203ENST00000426886 KDM4FA0A1W2PPD8 638 aa19.31■□□□□ 0.68
SMIM12-203ENST00000426886 ZMYM4Q5VZL5 1548 aa19.31■□□□□ 0.68
SMIM12-203ENST00000426886 MAGI2Q86UL8 1455 aa19.3■□□□□ 0.68
SMIM12-203ENST00000426886 FGD6Q6ZV73 1430 aa19.3■□□□□ 0.68
SMIM12-203ENST00000426886 TSPY4P0CV99 314 aa19.3■□□□□ 0.68
SMIM12-203ENST00000426886 TSPY10P0CW01 314 aa19.3■□□□□ 0.68
SMIM12-203ENST00000426886 KDM5CP41229 1560 aa19.29■□□□□ 0.68
SMIM12-203ENST00000426886 MLH3Q9UHC1 1453 aa19.27■□□□□ 0.68
SMIM12-203ENST00000426886 RSPH4AQ5TD94 716 aa19.27■□□□□ 0.68
SMIM12-203ENST00000426886 ARHGEF40Q8TER5 1519 aa19.26■□□□□ 0.67
SMIM12-203ENST00000426886 HECW2Q9P2P5 1572 aa19.26■□□□□ 0.67
SMIM12-203ENST00000426886 ATP10AO60312 1499 aa19.26■□□□□ 0.67
SMIM12-203ENST00000426886 CCDC141Q6ZP82 1450 aa19.25■□□□□ 0.67
SMIM12-203ENST00000426886 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
SMIM12-203ENST00000426886 CHIC2Q9UKJ5 165 aa19.25■□□□□ 0.67
SMIM12-203ENST00000426886 PTPN23Q9H3S7 1636 aa19.24■□□□□ 0.67
SMIM12-203ENST00000426886 ITGAEP38570 1179 aa19.24■□□□□ 0.67
SMIM12-203ENST00000426886 C9orf84Q5VXU9 1444 aa19.22■□□□□ 0.67
SMIM12-203ENST00000426886 KIDINS220Q9ULH0 1771 aa19.22■□□□□ 0.67
SMIM12-203ENST00000426886 PLPPR3Q6T4P5 718 aa19.21■□□□□ 0.67
SMIM12-203ENST00000426886 ATP7AQ04656 1500 aa19.21■□□□□ 0.67
SMIM12-203ENST00000426886 DIP2CQ9Y2E4 1556 aa19.2■□□□□ 0.66
SMIM12-203ENST00000426886 ABCA6Q8N139 1617 aa19.2■□□□□ 0.66
SMIM12-203ENST00000426886 ABCC5O15440 1437 aa19.19■□□□□ 0.66
SMIM12-203ENST00000426886 SIGLEC1Q9BZZ2 1709 aa19.18■□□□□ 0.66
SMIM12-203ENST00000426886 RRP7BPQ9NSQ0 103 aa19.18■□□□□ 0.66
SMIM12-203ENST00000426886 TCOF1Q13428 1488 aaKnown RBP19.17■□□□□ 0.66
SMIM12-203ENST00000426886 ARHGEF5Q12774 1597 aa19.17■□□□□ 0.66
SMIM12-203ENST00000426886 RTEL1-TNFRSF6BF6WH68 1400 aa19.16■□□□□ 0.66
SMIM12-203ENST00000426886 DAPK1P53355 1430 aa19.16■□□□□ 0.66
SMIM12-203ENST00000426886 GGT6Q6P531 493 aa19.16■□□□□ 0.66
SMIM12-203ENST00000426886 INO80Q9ULG1 1556 aaPredicted RBP19.15■□□□□ 0.66
SMIM12-203ENST00000426886 A2MP01023 1474 aa19.15■□□□□ 0.66
SMIM12-203ENST00000426886 KIF3BO15066 747 aa19.13■□□□□ 0.65
SMIM12-203ENST00000426886 DHX29Q7Z478 1369 aaKnown RBP19.11■□□□□ 0.65
SMIM12-203ENST00000426886 ESF1Q9H501 851 aaKnown RBP19.1■□□□□ 0.65
SMIM12-203ENST00000426886 BCORL1Q5H9F3 1711 aa19.09■□□□□ 0.65
SMIM12-203ENST00000426886 DNMT1P26358 1616 aaKnown RBP19.09■□□□□ 0.65
SMIM12-203ENST00000426886 PTPRKQ15262 1439 aa19.08■□□□□ 0.65
SMIM12-203ENST00000426886 KIF15Q9NS87 1388 aa19.08■□□□□ 0.64
SMIM12-203ENST00000426886 CEBPAP49715 358 aaPredicted RBP19.07■□□□□ 0.64
SMIM12-203ENST00000426886 ANKRD30AQ9BXX3 1397 aa19.06■□□□□ 0.64
SMIM12-203ENST00000426886 MADDQ8WXG6 1647 aa19.06■□□□□ 0.64
SMIM12-203ENST00000426886 REREQ9P2R6 1566 aa19.06■□□□□ 0.64
SMIM12-203ENST00000426886 RRBP1Q9P2E9 1410 aaKnown RBP19.05■□□□□ 0.64
SMIM12-203ENST00000426886 AGLP35573 1532 aa19.05■□□□□ 0.64
SMIM12-203ENST00000426886 ADAMTSL3P82987 1691 aa19.04■□□□□ 0.64
SMIM12-203ENST00000426886 MAST1Q9Y2H9 1570 aa19.04■□□□□ 0.64
SMIM12-203ENST00000426886 SHANK2Q9UPX8 1470 aa19.04■□□□□ 0.64
SMIM12-203ENST00000426886 NCOA1Q15788 1441 aa19.03■□□□□ 0.64
SMIM12-203ENST00000426886 ADGBQ8N7X0 1667 aa19.03■□□□□ 0.64
SMIM12-203ENST00000426886 PTPRMP28827 1452 aa19.03■□□□□ 0.64
SMIM12-203ENST00000426886 PLXNC1O60486 1568 aa19.03■□□□□ 0.64
SMIM12-203ENST00000426886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.03■□□□□ 0.64
SMIM12-203ENST00000426886 CROCC2H7BZ55 1655 aa19.01■□□□□ 0.63
SMIM12-203ENST00000426886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.01■□□□□ 0.63
SMIM12-203ENST00000426886 RIMS1Q86UR5 1692 aaKnown RBP19■□□□□ 0.63
SMIM12-203ENST00000426886 WASHC2CQ9Y4E1 1318 aa18.99■□□□□ 0.63
SMIM12-203ENST00000426886 DUOX2Q9NRD8 1548 aa18.98■□□□□ 0.63
SMIM12-203ENST00000426886 FER1L4A9Z1Z3 1794 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms