RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 HECW1Q76N89 1606 aa19.87■□□□□ 0.77
ERCC3-202ENST00000426778 PRKRIP1Q9H875 184 aaPredicted RBP19.86■□□□□ 0.77
ERCC3-202ENST00000426778 TCOF1Q13428 1488 aaKnown RBP19.86■□□□□ 0.77
ERCC3-202ENST00000426778 GCC2Q8IWJ2 1684 aa19.85■□□□□ 0.77
ERCC3-202ENST00000426778 CNTLNQ9NXG0 1405 aa19.84■□□□□ 0.77
ERCC3-202ENST00000426778 CCDC7Q96M83 1385 aa19.84■□□□□ 0.77
ERCC3-202ENST00000426778 ZNF608Q9ULD9 1512 aaPredicted RBP19.83■□□□□ 0.77
ERCC3-202ENST00000426778 MSH5O43196 834 aa19.83■□□□□ 0.76
ERCC3-202ENST00000426778 PBRM1Q86U86 1689 aa19.83■□□□□ 0.76
ERCC3-202ENST00000426778 FBLN2P98095 1184 aa19.82■□□□□ 0.76
ERCC3-202ENST00000426778 B4GALNT3Q6L9W6 998 aa19.81■□□□□ 0.76
ERCC3-202ENST00000426778 KIF7Q2M1P5 1343 aa19.81■□□□□ 0.76
ERCC3-202ENST00000426778 DAPK1P53355 1430 aa19.8■□□□□ 0.76
ERCC3-202ENST00000426778 WDR62O43379 1518 aa19.8■□□□□ 0.76
ERCC3-202ENST00000426778 ANKRD30BQ9BXX2 1392 aa19.8■□□□□ 0.76
ERCC3-202ENST00000426778 ABCC5O15440 1437 aa19.79■□□□□ 0.76
ERCC3-202ENST00000426778 MIA2Q96PC5 1412 aa19.77■□□□□ 0.76
ERCC3-202ENST00000426778 CDK11AQ9UQ88 783 aaPredicted RBP19.77■□□□□ 0.76
ERCC3-202ENST00000426778 NCOA1Q15788 1441 aa19.77■□□□□ 0.76
ERCC3-202ENST00000426778 ADAMTS12P58397 1594 aa19.76■□□□□ 0.75
ERCC3-202ENST00000426778 PRG4Q92954 1404 aaPredicted RBP19.76■□□□□ 0.75
ERCC3-202ENST00000426778 CFDP1Q9UEE9 299 aaPredicted RBP19.75■□□□□ 0.75
ERCC3-202ENST00000426778 RPRD2Q5VT52 1461 aaKnown RBP19.73■□□□□ 0.75
ERCC3-202ENST00000426778 NUP153P49790 1475 aaKnown RBP19.73■□□□□ 0.75
ERCC3-202ENST00000426778 TEX14Q8IWB6 1497 aa19.72■□□□□ 0.75
ERCC3-202ENST00000426778 AKNAQ7Z591 1439 aa19.72■□□□□ 0.75
ERCC3-202ENST00000426778 PKD2Q13563 968 aa19.71■□□□□ 0.75
ERCC3-202ENST00000426778 DISP1Q96F81 1524 aa19.7■□□□□ 0.74
ERCC3-202ENST00000426778 KDM2AQ9Y2K7 1162 aa19.69■□□□□ 0.74
ERCC3-202ENST00000426778 PPP4R2Q9NY27 417 aa19.67■□□□□ 0.74
ERCC3-202ENST00000426778 PLB1Q6P1J6 1458 aa19.66■□□□□ 0.74
ERCC3-202ENST00000426778 DNMT1P26358 1616 aaKnown RBP19.65■□□□□ 0.74
ERCC3-202ENST00000426778 MRC2Q9UBG0 1479 aa19.65■□□□□ 0.74
ERCC3-202ENST00000426778 SPATA31E1Q6ZUB1 1445 aa19.65■□□□□ 0.74
ERCC3-202ENST00000426778 ZBED9Q6R2W3 1325 aa19.65■□□□□ 0.74
ERCC3-202ENST00000426778 KIAA0556O60303 1618 aa19.65■□□□□ 0.74
ERCC3-202ENST00000426778 CHMP7Q8WUX9 453 aaPredicted RBP19.64■□□□□ 0.73
ERCC3-202ENST00000426778 ROCK1Q13464 1354 aa19.64■□□□□ 0.73
ERCC3-202ENST00000426778 PZPP20742 1482 aa19.63■□□□□ 0.73
ERCC3-202ENST00000426778 USP47Q96K76 1375 aa19.62■□□□□ 0.73
ERCC3-202ENST00000426778 CAMSAP2Q08AD1 1489 aa19.62■□□□□ 0.73
ERCC3-202ENST00000426778 SALL2Q9Y467 1007 aaPredicted RBP19.61■□□□□ 0.73
ERCC3-202ENST00000426778 KIAA0586Q9BVV6 1533 aa19.61■□□□□ 0.73
ERCC3-202ENST00000426778 RAPGEF6Q8TEU7 1601 aa19.6■□□□□ 0.73
ERCC3-202ENST00000426778 ERICH6Q7L0X2 663 aa19.6■□□□□ 0.73
ERCC3-202ENST00000426778 KIF14Q15058 1648 aa19.59■□□□□ 0.73
ERCC3-202ENST00000426778 BCORL1Q5H9F3 1711 aa19.57■□□□□ 0.72
ERCC3-202ENST00000426778 DHX29Q7Z478 1369 aaKnown RBP19.57■□□□□ 0.72
ERCC3-202ENST00000426778 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
ERCC3-202ENST00000426778 CARD11Q9BXL7 1154 aa19.56■□□□□ 0.72
ERCC3-202ENST00000426778 GPATCH8Q9UKJ3 1502 aaKnown RBP19.56■□□□□ 0.72
ERCC3-202ENST00000426778 TROQ12816 1431 aaPredicted RBP19.56■□□□□ 0.72
ERCC3-202ENST00000426778 NUP155O75694 1391 aa19.55■□□□□ 0.72
ERCC3-202ENST00000426778 HNRNPMP52272 730 aaKnown RBP eCLIP19.54■□□□□ 0.722e-6■■■■□ 23.4
ERCC3-202ENST00000426778 ST20-MTHFSA0A0A6YYL1 179 aa19.53■□□□□ 0.72
ERCC3-202ENST00000426778 DCAF11Q8TEB1 546 aa19.53■□□□□ 0.72
ERCC3-202ENST00000426778 KIAA1107Q9UPP5 1409 aa19.53■□□□□ 0.72
ERCC3-202ENST00000426778 IFT140Q96RY7 1462 aa19.53■□□□□ 0.72
ERCC3-202ENST00000426778 TMC1Q8TDI8 760 aa19.52■□□□□ 0.72
ERCC3-202ENST00000426778 FANCIQ9NVI1 1328 aa19.52■□□□□ 0.71
ERCC3-202ENST00000426778 JPH4Q96JJ6 628 aa19.52■□□□□ 0.71
ERCC3-202ENST00000426778 ANKRD50Q9ULJ7 1429 aa19.51■□□□□ 0.71
ERCC3-202ENST00000426778 EIF4G3O43432 1585 aaKnown RBP19.5■□□□□ 0.71
ERCC3-202ENST00000426778 BCL11AQ9H165 835 aa19.5■□□□□ 0.71
ERCC3-202ENST00000426778 RGL3Q3MIN7 710 aa19.5■□□□□ 0.71
ERCC3-202ENST00000426778 ANKRD30AQ9BXX3 1397 aa19.49■□□□□ 0.71
ERCC3-202ENST00000426778 PLEKHD1A6NEE1 506 aa19.49■□□□□ 0.71
ERCC3-202ENST00000426778 NUDCQ9Y266 331 aa19.47■□□□□ 0.71
ERCC3-202ENST00000426778 CCDC136Q96JN2 1154 aa19.47■□□□□ 0.71
ERCC3-202ENST00000426778 ERICH6BQ5W0A0 696 aa19.46■□□□□ 0.71
ERCC3-202ENST00000426778 CEP170Q5SW79 1584 aa19.46■□□□□ 0.71
ERCC3-202ENST00000426778 PNISRQ8TF01 805 aaKnown RBP19.46■□□□□ 0.71
ERCC3-202ENST00000426778 MBD5Q9P267 1494 aa19.46■□□□□ 0.71
ERCC3-202ENST00000426778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.45■□□□□ 0.71e-11■■■■□ 21.4
ERCC3-202ENST00000426778 TSPY4P0CV99 314 aa19.45■□□□□ 0.7
ERCC3-202ENST00000426778 TSPY10P0CW01 314 aa19.45■□□□□ 0.7
ERCC3-202ENST00000426778 ERCC6Q03468 1493 aa19.44■□□□□ 0.7
ERCC3-202ENST00000426778 POLR1AO95602 1720 aaPredicted RBP19.43■□□□□ 0.7
ERCC3-202ENST00000426778 KDM5CP41229 1560 aa19.41■□□□□ 0.7
ERCC3-202ENST00000426778 C9orf84Q5VXU9 1444 aa19.41■□□□□ 0.7
ERCC3-202ENST00000426778 SMG6Q86US8 1419 aaKnown RBP19.41■□□□□ 0.7
ERCC3-202ENST00000426778 ADGBQ8N7X0 1667 aa19.4■□□□□ 0.7
ERCC3-202ENST00000426778 NBR1Q14596 966 aa19.4■□□□□ 0.7
ERCC3-202ENST00000426778 PAK3O75914 559 aaPredicted RBP19.4■□□□□ 0.7
ERCC3-202ENST00000426778 NBPF1Q3BBV0 1214 aa19.4■□□□□ 0.7
ERCC3-202ENST00000426778 ITSN2Q9NZM3 1697 aa19.39■□□□□ 0.7
ERCC3-202ENST00000426778 KIF15Q9NS87 1388 aa19.38■□□□□ 0.69
ERCC3-202ENST00000426778 ROCK2O75116 1388 aaKnown RBP19.37■□□□□ 0.69
ERCC3-202ENST00000426778 CARMIL2Q6F5E8 1435 aa19.37■□□□□ 0.69
ERCC3-202ENST00000426778 ADGRL2O95490 1459 aa19.36■□□□□ 0.69
ERCC3-202ENST00000426778 CROCC2H7BZ55 1655 aa19.35■□□□□ 0.69
ERCC3-202ENST00000426778 CC2D1BQ5T0F9 858 aaKnown RBP19.35■□□□□ 0.69
ERCC3-202ENST00000426778 ATP10BO94823 1461 aa19.35■□□□□ 0.69
ERCC3-202ENST00000426778 CDC42BPAQ5VT25 1732 aa19.35■□□□□ 0.69
ERCC3-202ENST00000426778 SYNJ2O15056 1496 aa19.34■□□□□ 0.69
ERCC3-202ENST00000426778 MAGI1Q96QZ7 1491 aaPredicted RBP19.33■□□□□ 0.68
ERCC3-202ENST00000426778 RALGAPBQ86X10 1494 aa19.33■□□□□ 0.68
ERCC3-202ENST00000426778 EXOC6Q8TAG9 804 aa19.32■□□□□ 0.68
ERCC3-202ENST00000426778 CDCA7LQ96GN5 454 aa19.32■□□□□ 0.68
ERCC3-202ENST00000426778 NPM2Q86SE8 214 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms