RNA–Protein interactions for RNA: ENST00000425515.6

VNN3-207, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-207ENST00000425515 UBE2Q2Q8WVN8 375 aa8.86□□□□□ -0.99
VNN3-207ENST00000425515 FYCO1Q9BQS8 1478 aa8.85□□□□□ -0.99
VNN3-207ENST00000425515 WDR97A6NE52 1622 aa8.85□□□□□ -0.99
VNN3-207ENST00000425515 CASKIN1Q8WXD9 1431 aa8.85□□□□□ -0.99
VNN3-207ENST00000425515 ABCA5Q8WWZ7 1642 aa8.84□□□□□ -0.99
VNN3-207ENST00000425515 REM2Q8IYK8 340 aaPredicted RBP8.84□□□□□ -0.99
VNN3-207ENST00000425515 TDRD9Q8NDG6 1382 aaKnown RBP8.84□□□□□ -0.99
VNN3-207ENST00000425515 CTTNBP2Q8WZ74 1663 aa8.83□□□□□ -1
VNN3-207ENST00000425515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.83□□□□□ -1
VNN3-207ENST00000425515 MRC2Q9UBG0 1479 aa8.82□□□□□ -1
VNN3-207ENST00000425515 ATP1B4Q9UN42 357 aaPredicted RBP8.82□□□□□ -1
VNN3-207ENST00000425515 P3H3Q8IVL6 736 aa8.81□□□□□ -1
VNN3-207ENST00000425515 FHOD3Q2V2M9 1422 aa8.81□□□□□ -1
VNN3-207ENST00000425515 CFAP43Q8NDM7 1665 aa8.8□□□□□ -1
VNN3-207ENST00000425515 KIF21AQ7Z4S6 1674 aa8.8□□□□□ -1
VNN3-207ENST00000425515 PCF11O94913 1555 aaKnown RBP8.79□□□□□ -1
VNN3-207ENST00000425515 TARBP1Q13395 1621 aaKnown RBP8.79□□□□□ -1
VNN3-207ENST00000425515 IFT140Q96RY7 1462 aa8.79□□□□□ -1
VNN3-207ENST00000425515 PAXIP1Q6ZW49 1069 aaPredicted RBP8.78□□□□□ -1
VNN3-207ENST00000425515 ANO8Q9HCE9 1232 aaPredicted RBP8.78□□□□□ -1
VNN3-207ENST00000425515 THOC2Q8NI27 1593 aaKnown RBP8.78□□□□□ -1
VNN3-207ENST00000425515 GRIN2BQ13224 1484 aa8.78□□□□□ -1
VNN3-207ENST00000425515 SETD5Q9C0A6 1442 aa8.78□□□□□ -1
VNN3-207ENST00000425515 MTUS2Q5JR59 1369 aa8.77□□□□□ -1.01
VNN3-207ENST00000425515 FAM50AQ14320 339 aaKnown RBP8.77□□□□□ -1.01
VNN3-207ENST00000425515 NOP58Q9Y2X3 529 aaKnown RBP8.77□□□□□ -1.01
VNN3-207ENST00000425515 SAMD9Q5K651 1589 aa8.77□□□□□ -1.01
VNN3-207ENST00000425515 PHLDB1Q86UU1 1377 aa8.77□□□□□ -1.01
VNN3-207ENST00000425515 ITGAEP38570 1179 aa8.76□□□□□ -1.01
VNN3-207ENST00000425515 BBXQ8WY36 941 aaPredicted RBP8.76□□□□□ -1.01
VNN3-207ENST00000425515 CFAP44Q96MT7 982 aa8.76□□□□□ -1.01
VNN3-207ENST00000425515 PPP4R2Q9NY27 417 aa8.76□□□□□ -1.01
VNN3-207ENST00000425515 RAB3GAP2Q9H2M9 1393 aa8.75□□□□□ -1.01
VNN3-207ENST00000425515 PITPNM1O00562 1244 aa8.75□□□□□ -1.01
VNN3-207ENST00000425515 ANP32CO43423 234 aa8.75□□□□□ -1.01
VNN3-207ENST00000425515 RTL5Q5HYW3 569 aaPredicted RBP8.75□□□□□ -1.01
VNN3-207ENST00000425515 SNAPC4Q5SXM2 1469 aa8.75□□□□□ -1.01
VNN3-207ENST00000425515 CCDC18Q5T9S5 1454 aa8.75□□□□□ -1.01
VNN3-207ENST00000425515 PIP4P2Q8N4L2 257 aa8.74□□□□□ -1.01
VNN3-207ENST00000425515 USP35Q9P2H5 1018 aa8.73□□□□□ -1.01
VNN3-207ENST00000425515 WDR62O43379 1518 aa8.73□□□□□ -1.01
VNN3-207ENST00000425515 SPDYE2BA6NHP3 402 aa8.73□□□□□ -1.01
VNN3-207ENST00000425515 PPP1R15AO75807 674 aaPredicted RBP8.73□□□□□ -1.01
VNN3-207ENST00000425515 SPDYE6P0CI01 402 aa8.73□□□□□ -1.01
VNN3-207ENST00000425515 SPDYE2Q495Y8 402 aa8.73□□□□□ -1.01
VNN3-207ENST00000425515 PBRM1Q86U86 1689 aa8.73□□□□□ -1.01
VNN3-207ENST00000425515 IQGAP2Q13576 1575 aa8.72□□□□□ -1.01
VNN3-207ENST00000425515 ADAMTS12P58397 1594 aa8.72□□□□□ -1.01
VNN3-207ENST00000425515 FGD6Q6ZV73 1430 aa8.71□□□□□ -1.01
VNN3-207ENST00000425515 EHBP1L1Q8N3D4 1523 aa8.71□□□□□ -1.01
VNN3-207ENST00000425515 C11orf95C9JLR9 678 aaPredicted RBP8.71□□□□□ -1.01
VNN3-207ENST00000425515 KCNH8Q96L42 1107 aa8.71□□□□□ -1.01
VNN3-207ENST00000425515 PROM2Q8N271 834 aa8.71□□□□□ -1.02
VNN3-207ENST00000425515 ERCC6Q03468 1493 aa8.71□□□□□ -1.02
VNN3-207ENST00000425515 SALL2Q9Y467 1007 aaPredicted RBP8.7□□□□□ -1.02
VNN3-207ENST00000425515 HECW1Q76N89 1606 aa8.7□□□□□ -1.02
VNN3-207ENST00000425515 KIAA0586Q9BVV6 1533 aa8.7□□□□□ -1.02
VNN3-207ENST00000425515 MYOM3Q5VTT5 1437 aa8.7□□□□□ -1.02
VNN3-207ENST00000425515 CCDC9Q9Y3X0 531 aaKnown RBP8.69□□□□□ -1.02
VNN3-207ENST00000425515 UGGT2Q9NYU1 1516 aa8.69□□□□□ -1.02
VNN3-207ENST00000425515 SUPT6HQ7KZ85 1726 aaKnown RBP8.69□□□□□ -1.02
VNN3-207ENST00000425515 NCOA2Q15596 1464 aa8.68□□□□□ -1.02
VNN3-207ENST00000425515 ANP32AP39687 249 aaKnown RBP8.68□□□□□ -1.02
VNN3-207ENST00000425515 FXR2P51116 673 aaKnown RBP eCLIP8.67□□□□□ -1.02
VNN3-207ENST00000425515 DDX10Q13206 875 aaKnown RBP8.67□□□□□ -1.02
VNN3-207ENST00000425515 MKRN4PQ13434 485 aaPredicted RBP8.67□□□□□ -1.02
VNN3-207ENST00000425515 IPO9Q96P70 1041 aaKnown RBP8.67□□□□□ -1.02
VNN3-207ENST00000425515 MAGI1Q96QZ7 1491 aaPredicted RBP8.67□□□□□ -1.02
VNN3-207ENST00000425515 HMGB1P09429 215 aaKnown RBP8.66□□□□□ -1.02
VNN3-207ENST00000425515 WASHC2AQ641Q2 1341 aa8.66□□□□□ -1.02
VNN3-207ENST00000425515 HFM1A2PYH4 1435 aa8.66□□□□□ -1.02
VNN3-207ENST00000425515 MIA2Q96PC5 1412 aa8.66□□□□□ -1.02
VNN3-207ENST00000425515 SP7Q8TDD2 431 aaPredicted RBP8.66□□□□□ -1.02
VNN3-207ENST00000425515 TRIM52Q96A61 297 aa8.66□□□□□ -1.02
VNN3-207ENST00000425515 MAPKBP1O60336 1514 aa8.65□□□□□ -1.02
VNN3-207ENST00000425515 CHMP7Q8WUX9 453 aaPredicted RBP8.65□□□□□ -1.02
VNN3-207ENST00000425515 ZBTB47Q9UFB7 747 aaPredicted RBP8.65□□□□□ -1.02
VNN3-207ENST00000425515 EPRSP07814 1512 aaKnown RBP8.65□□□□□ -1.03
VNN3-207ENST00000425515 GRIN2AQ12879 1464 aa8.64□□□□□ -1.03
VNN3-207ENST00000425515 ARHGEF11O15085 1522 aa8.64□□□□□ -1.03
VNN3-207ENST00000425515 ZNF608Q9ULD9 1512 aaPredicted RBP8.64□□□□□ -1.03
VNN3-207ENST00000425515 CCDC136Q96JN2 1154 aa8.64□□□□□ -1.03
VNN3-207ENST00000425515 ZNF692Q9BU19 519 aaPredicted RBP8.63□□□□□ -1.03
VNN3-207ENST00000425515 WASHC2CQ9Y4E1 1318 aa8.63□□□□□ -1.03
VNN3-207ENST00000425515 UACAQ9BZF9 1416 aa8.63□□□□□ -1.03
VNN3-207ENST00000425515 TCOF1Q13428 1488 aaKnown RBP8.63□□□□□ -1.03
VNN3-207ENST00000425515 CDK11BP21127 795 aaKnown RBP8.63□□□□□ -1.03
VNN3-207ENST00000425515 CARMIL2Q6F5E8 1435 aa8.63□□□□□ -1.03
VNN3-207ENST00000425515 SYNJ2O15056 1496 aa8.62□□□□□ -1.03
VNN3-207ENST00000425515 HAX1O00165 279 aa8.62□□□□□ -1.03
VNN3-207ENST00000425515 AKNAQ7Z591 1439 aa8.62□□□□□ -1.03
VNN3-207ENST00000425515 EIF4G3O43432 1585 aaKnown RBP8.62□□□□□ -1.03
VNN3-207ENST00000425515 GLIPR1L2Q4G1C9 344 aa8.61□□□□□ -1.03
VNN3-207ENST00000425515 PTPN23Q9H3S7 1636 aa8.61□□□□□ -1.03
VNN3-207ENST00000425515 KIAA0556O60303 1618 aa8.61□□□□□ -1.03
VNN3-207ENST00000425515 PPM1GO15355 546 aaPredicted RBP8.61□□□□□ -1.03
VNN3-207ENST00000425515 SPDYE1Q8NFV5 336 aaPredicted RBP8.61□□□□□ -1.03
VNN3-207ENST00000425515 RSPH6AQ9H0K4 717 aa8.61□□□□□ -1.03
VNN3-207ENST00000425515 CLEC11AQ9Y240 323 aa8.61□□□□□ -1.03
VNN3-207ENST00000425515 NAIPQ13075 1403 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms