RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 CDC42BPBQ9Y5S2 1711 aa34.3■■■■□ 3.08
HMGA2-205ENST00000425208 NCOA2Q15596 1464 aa34.29■■■■□ 3.08
HMGA2-205ENST00000425208 CCNB3Q8WWL7 1395 aa34.27■■■■□ 3.08
HMGA2-205ENST00000425208 GPATCH8Q9UKJ3 1502 aaKnown RBP34.25■■■■□ 3.07
HMGA2-205ENST00000425208 ITSN2Q9NZM3 1697 aa34.25■■■■□ 3.07
HMGA2-205ENST00000425208 EFCAB2Q5VUJ9 269 aa34.23■■■■□ 3.07
HMGA2-205ENST00000425208 AKNAQ7Z591 1439 aa34.23■■■■□ 3.07
HMGA2-205ENST00000425208 COL17A1Q9UMD9 1497 aaPredicted RBP34.2■■■■□ 3.07
HMGA2-205ENST00000425208 ADGRL1O94910 1474 aa34.17■■■■□ 3.06
HMGA2-205ENST00000425208 CFDP1Q9UEE9 299 aaPredicted RBP34.14■■■■□ 3.06
HMGA2-205ENST00000425208 DENND4BO75064 1496 aaPredicted RBP34.09■■■■□ 3.05
HMGA2-205ENST00000425208 SCAPERQ9BY12 1400 aa34.09■■■■□ 3.05
HMGA2-205ENST00000425208 SAMD9LQ8IVG5 1584 aa34.09■■■■□ 3.05
HMGA2-205ENST00000425208 ABCC1P33527 1531 aa34.08■■■■□ 3.05
HMGA2-205ENST00000425208 ZNF777Q9ULD5 760 aaPredicted RBP34.07■■■■□ 3.04
HMGA2-205ENST00000425208 RICTORQ6R327 1708 aa34.07■■■■□ 3.04
HMGA2-205ENST00000425208 MYOM3Q5VTT5 1437 aa34.06■■■■□ 3.04
HMGA2-205ENST00000425208 FRMPD1Q5SYB0 1578 aa34.04■■■■□ 3.04
HMGA2-205ENST00000425208 RAPGEF3O95398 923 aa34.04■■■■□ 3.04
HMGA2-205ENST00000425208 POGZQ7Z3K3 1410 aa34.02■■■■□ 3.04
HMGA2-205ENST00000425208 PLEKHH2Q8IVE3 1493 aa34.02■■■■□ 3.04
HMGA2-205ENST00000425208 SYCP2Q9BX26 1530 aa33.99■■■■□ 3.03
HMGA2-205ENST00000425208 ZNF518AQ6AHZ1 1483 aa33.98■■■■□ 3.03
HMGA2-205ENST00000425208 MIA2Q96PC5 1412 aa33.98■■■■□ 3.03
HMGA2-205ENST00000425208 ARHGEF12Q9NZN5 1544 aa33.97■■■■□ 3.03
HMGA2-205ENST00000425208 CAMSAP2Q08AD1 1489 aa33.96■■■■□ 3.03
HMGA2-205ENST00000425208 KIAA1107Q9UPP5 1409 aa33.96■■■■□ 3.03
HMGA2-205ENST00000425208 ZMYM4Q5VZL5 1548 aa33.94■■■■□ 3.02
HMGA2-205ENST00000425208 PPARGC1BQ86YN6 1023 aaKnown RBP33.94■■■■□ 3.02
HMGA2-205ENST00000425208 ZNF644Q9H582 1327 aaPredicted RBP33.93■■■■□ 3.02
HMGA2-205ENST00000425208 KDM5CP41229 1560 aa33.91■■■■□ 3.02
HMGA2-205ENST00000425208 TRAPPC8Q9Y2L5 1435 aa33.9■■■■□ 3.02
HMGA2-205ENST00000425208 FGD6Q6ZV73 1430 aa33.89■■■■□ 3.02
HMGA2-205ENST00000425208 HNRNPMP52272 730 aaKnown RBP eCLIP33.88■■■■□ 3.012e-8■■□□□ 11.6
HMGA2-205ENST00000425208 PTPN23Q9H3S7 1636 aa33.87■■■■□ 3.01
HMGA2-205ENST00000425208 AFAP1Q8N556 730 aa33.87■■■■□ 3.01
HMGA2-205ENST00000425208 MAGI2Q86UL8 1455 aa33.85■■■■□ 3.01
HMGA2-205ENST00000425208 MBD5Q9P267 1494 aa33.84■■■■□ 3.01
HMGA2-205ENST00000425208 HECW2Q9P2P5 1572 aa33.83■■■■□ 3.01
HMGA2-205ENST00000425208 ARHGEF40Q8TER5 1519 aa33.82■■■■□ 3
HMGA2-205ENST00000425208 ZFYVE16Q7Z3T8 1539 aa33.81■■■■□ 3
HMGA2-205ENST00000425208 ARHGEF5Q12774 1597 aa33.8■■■■□ 3
HMGA2-205ENST00000425208 TCOF1Q13428 1488 aaKnown RBP33.8■■■■□ 3
HMGA2-205ENST00000425208 CCDC141Q6ZP82 1450 aa33.79■■■■□ 3
HMGA2-205ENST00000425208 MLH3Q9UHC1 1453 aa33.78■■■■□ 3
HMGA2-205ENST00000425208 RSPH4AQ5TD94 716 aa33.77■■■■□ 3
HMGA2-205ENST00000425208 MYT1LQ9UL68 1186 aa33.76■■■□□ 2.99
HMGA2-205ENST00000425208 YEATS2Q9ULM3 1422 aa33.74■■■□□ 2.99
HMGA2-205ENST00000425208 SPAG9O60271 1321 aaKnown RBP33.73■■■□□ 2.99
HMGA2-205ENST00000425208 KIDINS220Q9ULH0 1771 aa33.72■■■□□ 2.99
HMGA2-205ENST00000425208 INO80Q9ULG1 1556 aaPredicted RBP33.72■■■□□ 2.99
HMGA2-205ENST00000425208 ATP7AQ04656 1500 aa33.7■■■□□ 2.99
HMGA2-205ENST00000425208 ABCA6Q8N139 1617 aa33.68■■■□□ 2.98
HMGA2-205ENST00000425208 DIP2CQ9Y2E4 1556 aa33.67■■■□□ 2.98
HMGA2-205ENST00000425208 DNMT1P26358 1616 aaKnown RBP33.66■■■□□ 2.98
HMGA2-205ENST00000425208 FAM50AQ14320 339 aaKnown RBP33.66■■■□□ 2.98
HMGA2-205ENST00000425208 CROCC2H7BZ55 1655 aa33.64■■■□□ 2.98
HMGA2-205ENST00000425208 ATP10AO60312 1499 aa33.64■■■□□ 2.98
HMGA2-205ENST00000425208 RTEL1-TNFRSF6BF6WH68 1400 aa33.64■■■□□ 2.98
HMGA2-205ENST00000425208 TSPY4P0CV99 314 aa33.63■■■□□ 2.97
HMGA2-205ENST00000425208 TSPY10P0CW01 314 aa33.63■■■□□ 2.97
HMGA2-205ENST00000425208 DAPK1P53355 1430 aa33.62■■■□□ 2.97
HMGA2-205ENST00000425208 C9orf84Q5VXU9 1444 aa33.62■■■□□ 2.97
HMGA2-205ENST00000425208 MAST1Q9Y2H9 1570 aa33.61■■■□□ 2.97
HMGA2-205ENST00000425208 ABCC5O15440 1437 aa33.6■■■□□ 2.97
HMGA2-205ENST00000425208 RRBP1Q9P2E9 1410 aaKnown RBP33.59■■■□□ 2.97
HMGA2-205ENST00000425208 SHANK2Q9UPX8 1470 aa33.59■■■□□ 2.97
HMGA2-205ENST00000425208 REREQ9P2R6 1566 aa33.58■■■□□ 2.97
HMGA2-205ENST00000425208 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.56■■■□□ 2.96
HMGA2-205ENST00000425208 ADGBQ8N7X0 1667 aa33.56■■■□□ 2.96
HMGA2-205ENST00000425208 SIGLEC1Q9BZZ2 1709 aa33.53■■■□□ 2.96
HMGA2-205ENST00000425208 ARID4BQ4LE39 1312 aaPredicted RBP33.52■■■□□ 2.96
HMGA2-205ENST00000425208 PLXNC1O60486 1568 aa33.5■■■□□ 2.95
HMGA2-205ENST00000425208 A2MP01023 1474 aa33.49■■■□□ 2.95
HMGA2-205ENST00000425208 AGLP35573 1532 aa33.45■■■□□ 2.94
HMGA2-205ENST00000425208 BCORL1Q5H9F3 1711 aa33.43■■■□□ 2.94
HMGA2-205ENST00000425208 CHIC2Q9UKJ5 165 aa33.41■■■□□ 2.94
HMGA2-205ENST00000425208 ADGRL2O95490 1459 aa33.4■■■□□ 2.94
HMGA2-205ENST00000425208 DHX29Q7Z478 1369 aaKnown RBP33.39■■■□□ 2.94
HMGA2-205ENST00000425208 ANKRD30AQ9BXX3 1397 aa33.39■■■□□ 2.94
HMGA2-205ENST00000425208 PTPRKQ15262 1439 aa33.38■■■□□ 2.93
HMGA2-205ENST00000425208 KIF15Q9NS87 1388 aa33.37■■■□□ 2.93
HMGA2-205ENST00000425208 ITGAEP38570 1179 aa33.36■■■□□ 2.93
HMGA2-205ENST00000425208 DUOX2Q9NRD8 1548 aa33.36■■■□□ 2.93
HMGA2-205ENST00000425208 NCOA1Q15788 1441 aa33.35■■■□□ 2.93
HMGA2-205ENST00000425208 ADAMTSL3P82987 1691 aa33.33■■■□□ 2.93
HMGA2-205ENST00000425208 RRP7BPQ9NSQ0 103 aa33.33■■■□□ 2.93
HMGA2-205ENST00000425208 MLECQ14165 292 aa33.32■■■□□ 2.92
HMGA2-205ENST00000425208 KDM4FA0A1W2PPD8 638 aa33.31■■■□□ 2.92
HMGA2-205ENST00000425208 ROCK1Q13464 1354 aa33.29■■■□□ 2.92
HMGA2-205ENST00000425208 EIF2AK4Q9P2K8 1649 aaKnown RBP33.29■■■□□ 2.92
HMGA2-205ENST00000425208 MADDQ8WXG6 1647 aa33.28■■■□□ 2.92
HMGA2-205ENST00000425208 ERBINQ96RT1 1412 aa33.27■■■□□ 2.92
HMGA2-205ENST00000425208 FER1L4A9Z1Z3 1794 aa33.27■■■□□ 2.92
HMGA2-205ENST00000425208 KIF3BO15066 747 aa33.23■■■□□ 2.91
HMGA2-205ENST00000425208 RIMS1Q86UR5 1692 aaKnown RBP33.2■■■□□ 2.91
HMGA2-205ENST00000425208 GGT6Q6P531 493 aa33.19■■■□□ 2.9
HMGA2-205ENST00000425208 RNF17Q9BXT8 1623 aaKnown RBP33.18■■■□□ 2.9
HMGA2-205ENST00000425208 ANKRD50Q9ULJ7 1429 aa33.17■■■□□ 2.9
HMGA2-205ENST00000425208 ESF1Q9H501 851 aaKnown RBP33.14■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms