RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 ZNF777Q9ULD5 760 aaPredicted RBP15.55■□□□□ 0.08
MDC1-205ENST00000425072 ITSN2Q9NZM3 1697 aa15.54■□□□□ 0.08
MDC1-205ENST00000425072 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.53■□□□□ 0.08
MDC1-205ENST00000425072 PLCH2O75038 1416 aa15.53■□□□□ 0.08
MDC1-205ENST00000425072 ADRA2BP18089 450 aa15.52■□□□□ 0.08
MDC1-205ENST00000425072 ITGAEP38570 1179 aa15.52■□□□□ 0.08
MDC1-205ENST00000425072 PTPN23Q9H3S7 1636 aa15.5■□□□□ 0.07
MDC1-205ENST00000425072 FAM69CQ0P6D2 419 aa15.5■□□□□ 0.07
MDC1-205ENST00000425072 CDC42BPAQ5VT25 1732 aa15.5■□□□□ 0.07
MDC1-205ENST00000425072 TCOF1Q13428 1488 aaKnown RBP15.5■□□□□ 0.07
MDC1-205ENST00000425072 TSPY4P0CV99 314 aa15.49■□□□□ 0.07
MDC1-205ENST00000425072 TSPY10P0CW01 314 aa15.49■□□□□ 0.07
MDC1-205ENST00000425072 CD109Q6YHK3 1445 aa15.49■□□□□ 0.07
MDC1-205ENST00000425072 MYO5CQ9NQX4 1742 aa15.48■□□□□ 0.07
MDC1-205ENST00000425072 ZNF644Q9H582 1327 aaPredicted RBP15.48■□□□□ 0.07
MDC1-205ENST00000425072 ABCA9Q8IUA7 1624 aa15.48■□□□□ 0.07
MDC1-205ENST00000425072 ARHGAP5Q13017 1502 aa15.47■□□□□ 0.07
MDC1-205ENST00000425072 ARAP3Q8WWN8 1544 aa15.47■□□□□ 0.07
MDC1-205ENST00000425072 PLEKHH2Q8IVE3 1493 aa15.46■□□□□ 0.07
MDC1-205ENST00000425072 CDC42BPBQ9Y5S2 1711 aa15.46■□□□□ 0.07
MDC1-205ENST00000425072 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.07
MDC1-205ENST00000425072 TTC37Q6PGP7 1564 aa15.45■□□□□ 0.06
MDC1-205ENST00000425072 HNRNPMP52272 730 aaKnown RBP eCLIP15.45■□□□□ 0.06
MDC1-205ENST00000425072 GLI2P10070 1586 aa15.45■□□□□ 0.06
MDC1-205ENST00000425072 KIAA1107Q9UPP5 1409 aa15.44■□□□□ 0.06
MDC1-205ENST00000425072 PREX2Q70Z35 1606 aa15.44■□□□□ 0.06
MDC1-205ENST00000425072 ACIN1Q9UKV3 1341 aaKnown RBP15.43■□□□□ 0.06
MDC1-205ENST00000425072 CAMSAP2Q08AD1 1489 aa15.42■□□□□ 0.06
MDC1-205ENST00000425072 HRCP23327 699 aa15.42■□□□□ 0.06
MDC1-205ENST00000425072 KIF13AQ9H1H9 1805 aa15.42■□□□□ 0.06
MDC1-205ENST00000425072 FANCAO15360 1455 aa15.4■□□□□ 0.06
MDC1-205ENST00000425072 CHIC2Q9UKJ5 165 aa15.4■□□□□ 0.06
MDC1-205ENST00000425072 ABCC5O15440 1437 aa15.38■□□□□ 0.05
MDC1-205ENST00000425072 DAPK1P53355 1430 aa15.38■□□□□ 0.05
MDC1-205ENST00000425072 AKNAQ7Z591 1439 aa15.38■□□□□ 0.05
MDC1-205ENST00000425072 ROCK1Q13464 1354 aa15.36■□□□□ 0.05
MDC1-205ENST00000425072 NEO1Q92859 1461 aa15.36■□□□□ 0.05
MDC1-205ENST00000425072 MBD5Q9P267 1494 aa15.36■□□□□ 0.05
MDC1-205ENST00000425072 ARHGEF5Q12774 1597 aa15.36■□□□□ 0.05
MDC1-205ENST00000425072 SAMD9LQ8IVG5 1584 aa15.36■□□□□ 0.05
MDC1-205ENST00000425072 CFAP74Q9C0B2 1584 aa15.36■□□□□ 0.05
MDC1-205ENST00000425072 DIP2BQ9P265 1576 aa15.36■□□□□ 0.05
MDC1-205ENST00000425072 DNMT1P26358 1616 aaKnown RBP15.35■□□□□ 0.05
MDC1-205ENST00000425072 SETD5Q9C0A6 1442 aa15.35■□□□□ 0.05
MDC1-205ENST00000425072 FBXO41Q8TF61 875 aa15.35■□□□□ 0.05
MDC1-205ENST00000425072 MAP3K4Q9Y6R4 1608 aa15.35■□□□□ 0.05
MDC1-205ENST00000425072 ANKRD30AQ9BXX3 1397 aa15.35■□□□□ 0.05
MDC1-205ENST00000425072 PTPRKQ15262 1439 aa15.34■□□□□ 0.05
MDC1-205ENST00000425072 SCAPERQ9BY12 1400 aa15.34■□□□□ 0.05
MDC1-205ENST00000425072 TEX14Q8IWB6 1497 aa15.34■□□□□ 0.05
MDC1-205ENST00000425072 RRP7BPQ9NSQ0 103 aa15.34■□□□□ 0.05
MDC1-205ENST00000425072 CCDC141Q6ZP82 1450 aa15.33■□□□□ 0.05
MDC1-205ENST00000425072 AFAP1Q8N556 730 aa15.33■□□□□ 0.04
MDC1-205ENST00000425072 ADGRL1O94910 1474 aa15.33■□□□□ 0.04
MDC1-205ENST00000425072 MYT1LQ9UL68 1186 aa15.32■□□□□ 0.04
MDC1-205ENST00000425072 SPAG9O60271 1321 aaKnown RBP15.32■□□□□ 0.04
MDC1-205ENST00000425072 NCOA1Q15788 1441 aa15.31■□□□□ 0.04
MDC1-205ENST00000425072 HFM1A2PYH4 1435 aa15.3■□□□□ 0.04
MDC1-205ENST00000425072 SHANK2Q9UPX8 1470 aa15.3■□□□□ 0.04
MDC1-205ENST00000425072 ABCC1P33527 1531 aa15.29■□□□□ 0.04
MDC1-205ENST00000425072 SYCP2Q9BX26 1530 aa15.29■□□□□ 0.04
MDC1-205ENST00000425072 ARHGEF12Q9NZN5 1544 aa15.29■□□□□ 0.04
MDC1-205ENST00000425072 RTEL1-TNFRSF6BF6WH68 1400 aa15.29■□□□□ 0.04
MDC1-205ENST00000425072 C9orf84Q5VXU9 1444 aa15.29■□□□□ 0.04
MDC1-205ENST00000425072 TSPOAP1O95153 1857 aa15.29■□□□□ 0.04
MDC1-205ENST00000425072 HECW2Q9P2P5 1572 aa15.28■□□□□ 0.04
MDC1-205ENST00000425072 TRAPPC8Q9Y2L5 1435 aa15.28■□□□□ 0.04
MDC1-205ENST00000425072 ADGRL2O95490 1459 aa15.27■□□□□ 0.04
MDC1-205ENST00000425072 LMTK3Q96Q04 1460 aa15.27■□□□□ 0.04
MDC1-205ENST00000425072 NAIPQ13075 1403 aa15.27■□□□□ 0.04
MDC1-205ENST00000425072 RAB3GAP2Q9H2M9 1393 aa15.27■□□□□ 0.04
MDC1-205ENST00000425072 DENND4BO75064 1496 aaPredicted RBP15.27■□□□□ 0.03
MDC1-205ENST00000425072 ZNF518AQ6AHZ1 1483 aa15.26■□□□□ 0.03
MDC1-205ENST00000425072 MAST1Q9Y2H9 1570 aa15.25■□□□□ 0.03
MDC1-205ENST00000425072 CCER1Q8TC90 406 aaPredicted RBP15.25■□□□□ 0.03
MDC1-205ENST00000425072 CROCC2H7BZ55 1655 aa15.25■□□□□ 0.03
MDC1-205ENST00000425072 RAPGEF3O95398 923 aa15.24■□□□□ 0.03
MDC1-205ENST00000425072 ADGBQ8N7X0 1667 aa15.24■□□□□ 0.03
MDC1-205ENST00000425072 TRIM52Q96A61 297 aa15.22■□□□□ 0.03
MDC1-205ENST00000425072 KIF15Q9NS87 1388 aa15.22■□□□□ 0.03
MDC1-205ENST00000425072 POGZQ7Z3K3 1410 aa15.21■□□□□ 0.03
MDC1-205ENST00000425072 ANKRD50Q9ULJ7 1429 aa15.21■□□□□ 0.03
MDC1-205ENST00000425072 MLH3Q9UHC1 1453 aa15.2■□□□□ 0.02
MDC1-205ENST00000425072 SOCS7O14512 581 aa15.2■□□□□ 0.02
MDC1-205ENST00000425072 PPRC1Q5VV67 1664 aaKnown RBP15.19■□□□□ 0.02
MDC1-205ENST00000425072 KDM6BO15054 1643 aa15.18■□□□□ 0.02
MDC1-205ENST00000425072 ZEB1P37275 1124 aaPredicted RBP15.18■□□□□ 0.02
MDC1-205ENST00000425072 GCC2Q8IWJ2 1684 aa15.18■□□□□ 0.02
MDC1-205ENST00000425072 CLSPNQ9HAW4 1339 aa15.17■□□□□ 0.02
MDC1-205ENST00000425072 DUOX2Q9NRD8 1548 aa15.17■□□□□ 0.02
MDC1-205ENST00000425072 DHX29Q7Z478 1369 aaKnown RBP15.17■□□□□ 0.02
MDC1-205ENST00000425072 PLXNC1O60486 1568 aa15.16■□□□□ 0.02
MDC1-205ENST00000425072 MAGI2Q86UL8 1455 aa15.16■□□□□ 0.02
MDC1-205ENST00000425072 ATP7AQ04656 1500 aa15.16■□□□□ 0.02
MDC1-205ENST00000425072 KDM5CP41229 1560 aa15.15■□□□□ 0.02
MDC1-205ENST00000425072 ILDR2Q71H61 639 aa15.14■□□□□ 0.01
MDC1-205ENST00000425072 RICTORQ6R327 1708 aa15.13■□□□□ 0.01
MDC1-205ENST00000425072 ERBINQ96RT1 1412 aa15.13■□□□□ 0.01
MDC1-205ENST00000425072 MPHOSPH9Q99550 1183 aa15.13■□□□□ 0.01
MDC1-205ENST00000425072 INO80Q9ULG1 1556 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms