RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 CSB-PGBD3P0DP91 1061 aa5.01□□□□□ -1.61
TOP2A-201ENST00000423485 WDR97A6NE52 1622 aa5□□□□□ -1.61
TOP2A-201ENST00000423485 TRIM52Q96A61 297 aa5□□□□□ -1.61
TOP2A-201ENST00000423485 FBXO41Q8TF61 875 aa5□□□□□ -1.61
TOP2A-201ENST00000423485 ATAD2BQ9ULI0 1458 aa4.99□□□□□ -1.61
TOP2A-201ENST00000423485 POLR3GLQ9BT43 218 aa4.99□□□□□ -1.61
TOP2A-201ENST00000423485 CWC22Q9HCG8 908 aaKnown RBP4.99□□□□□ -1.61
TOP2A-201ENST00000423485 ZNF710Q8N1W2 664 aa4.99□□□□□ -1.61
TOP2A-201ENST00000423485 PCGF6Q9BYE7 350 aa4.98□□□□□ -1.61
TOP2A-201ENST00000423485 LMTK3Q96Q04 1460 aa4.98□□□□□ -1.61
TOP2A-201ENST00000423485 BAZ1BQ9UIG0 1483 aaKnown RBP4.97□□□□□ -1.61
TOP2A-201ENST00000423485 FKBP8Q14318 412 aa4.97□□□□□ -1.61
TOP2A-201ENST00000423485 RBM33Q96EV2 1170 aaKnown RBP4.97□□□□□ -1.61
TOP2A-201ENST00000423485 CLSPNQ9HAW4 1339 aa4.97□□□□□ -1.61
TOP2A-201ENST00000423485 DCHS1Q96JQ0 3298 aa4.97□□□□□ -1.61
TOP2A-201ENST00000423485 CUX2O14529 1486 aa4.97□□□□□ -1.61
TOP2A-201ENST00000423485 POLD1P28340 1107 aa4.96□□□□□ -1.61
TOP2A-201ENST00000423485 KIF21BO75037 1637 aa4.96□□□□□ -1.62
TOP2A-201ENST00000423485 KANK1Q14678 1352 aa4.96□□□□□ -1.62
TOP2A-201ENST00000423485 TOP2BQ02880 1626 aa4.96□□□□□ -1.62
TOP2A-201ENST00000423485 SRPK2P78362 688 aaKnown RBP4.95□□□□□ -1.62
TOP2A-201ENST00000423485 SENP3-EIF4A1A0A087X0R7 540 aa4.94□□□□□ -1.62
TOP2A-201ENST00000423485 P3H3Q8IVL6 736 aa4.94□□□□□ -1.62
TOP2A-201ENST00000423485 ZEB1P37275 1124 aaPredicted RBP4.94□□□□□ -1.62
TOP2A-201ENST00000423485 ANO8Q9HCE9 1232 aaPredicted RBP4.94□□□□□ -1.62
TOP2A-201ENST00000423485 ZBTB47Q9UFB7 747 aaPredicted RBP4.94□□□□□ -1.62
TOP2A-201ENST00000423485 BAG6P46379 1132 aa4.93□□□□□ -1.62
TOP2A-201ENST00000423485 HNRNPMP52272 730 aaKnown RBP eCLIP4.93□□□□□ -1.62
TOP2A-201ENST00000423485 CAPN15O75808 1086 aa4.93□□□□□ -1.62
TOP2A-201ENST00000423485 CLIP1P30622 1438 aa4.93□□□□□ -1.62
TOP2A-201ENST00000423485 BOD1L1Q8NFC6 3051 aa4.93□□□□□ -1.62
TOP2A-201ENST00000423485 PDE3BQ13370 1112 aa4.93□□□□□ -1.62
TOP2A-201ENST00000423485 ZNF772Q68DY9 489 aaPredicted RBP4.93□□□□□ -1.62
TOP2A-201ENST00000423485 GPR162Q16538 588 aa4.92□□□□□ -1.62
TOP2A-201ENST00000423485 PROSER2Q86WR7 435 aaPredicted RBP4.92□□□□□ -1.62
TOP2A-201ENST00000423485 GGT6Q6P531 493 aa4.92□□□□□ -1.62
TOP2A-201ENST00000423485 ATMQ13315 3056 aa4.92□□□□□ -1.62
TOP2A-201ENST00000423485 CHD7Q9P2D1 2997 aa4.92□□□□□ -1.62
TOP2A-201ENST00000423485 CFAP43Q8NDM7 1665 aa4.92□□□□□ -1.62
TOP2A-201ENST00000423485 ITGAEP38570 1179 aa4.91□□□□□ -1.62
TOP2A-201ENST00000423485 KANK4Q5T7N3 995 aaPredicted RBP4.91□□□□□ -1.62
TOP2A-201ENST00000423485 FAM50AQ14320 339 aaKnown RBP4.91□□□□□ -1.62
TOP2A-201ENST00000423485 POGKQ9P215 609 aa4.91□□□□□ -1.62
TOP2A-201ENST00000423485 ILDR1Q86SU0 546 aaPredicted RBP4.91□□□□□ -1.62
TOP2A-201ENST00000423485 ACIN1Q9UKV3 1341 aaKnown RBP4.91□□□□□ -1.62
TOP2A-201ENST00000423485 ANKLE2Q86XL3 938 aa4.91□□□□□ -1.62
TOP2A-201ENST00000423485 SPENQ96T58 3664 aaKnown RBP4.9□□□□□ -1.62
TOP2A-201ENST00000423485 ARHGAP35Q9NRY4 1499 aa4.9□□□□□ -1.62
TOP2A-201ENST00000423485 PAK3O75914 559 aaPredicted RBP4.9□□□□□ -1.62
TOP2A-201ENST00000423485 EFCAB2Q5VUJ9 269 aa4.9□□□□□ -1.63
TOP2A-201ENST00000423485 ARHGEF11O15085 1522 aa4.9□□□□□ -1.63
TOP2A-201ENST00000423485 CEP164Q9UPV0 1460 aa4.9□□□□□ -1.63
TOP2A-201ENST00000423485 THEMISQ8N1K5 641 aaPredicted RBP4.89□□□□□ -1.63
TOP2A-201ENST00000423485 PRDM2Q13029 1718 aa4.88□□□□□ -1.63
TOP2A-201ENST00000423485 GTF2E1P29083 439 aaPredicted RBP4.88□□□□□ -1.63
TOP2A-201ENST00000423485 ADRA2BP18089 450 aa4.88□□□□□ -1.63
TOP2A-201ENST00000423485 NEUROD1Q13562 356 aa4.88□□□□□ -1.63
TOP2A-201ENST00000423485 NESP48681 1621 aa4.88□□□□□ -1.63
TOP2A-201ENST00000423485 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.88□□□□□ -1.63
TOP2A-201ENST00000423485 CCAR1Q8IX12 1150 aaKnown RBP4.88□□□□□ -1.63
TOP2A-201ENST00000423485 TARBP1Q13395 1621 aaKnown RBP4.88□□□□□ -1.63
TOP2A-201ENST00000423485 PSME1Q06323 249 aa4.87□□□□□ -1.63
TOP2A-201ENST00000423485 BCL11BQ9C0K0 894 aaPredicted RBP4.87□□□□□ -1.63
TOP2A-201ENST00000423485 LAMA5O15230 3695 aa4.87□□□□□ -1.63
TOP2A-201ENST00000423485 BCORL1Q5H9F3 1711 aa4.87□□□□□ -1.63
TOP2A-201ENST00000423485 RELNP78509 3460 aa4.87□□□□□ -1.63
TOP2A-201ENST00000423485 RXRBP28702 533 aa4.87□□□□□ -1.63
TOP2A-201ENST00000423485 CFTRP13569 1480 aa4.86□□□□□ -1.63
TOP2A-201ENST00000423485 SNAPC4Q5SXM2 1469 aa4.86□□□□□ -1.63
TOP2A-201ENST00000423485 EEA1Q15075 1411 aa4.86□□□□□ -1.63
TOP2A-201ENST00000423485 CERKQ8TCT0 537 aa4.86□□□□□ -1.63
TOP2A-201ENST00000423485 ERICH6Q7L0X2 663 aa4.85□□□□□ -1.63
TOP2A-201ENST00000423485 CLEC11AQ9Y240 323 aa4.85□□□□□ -1.63
TOP2A-201ENST00000423485 CEP162Q5TB80 1403 aa4.85□□□□□ -1.63
TOP2A-201ENST00000423485 YY1P25490 414 aa4.85□□□□□ -1.63
TOP2A-201ENST00000423485 SOCS7O14512 581 aa4.84□□□□□ -1.63
TOP2A-201ENST00000423485 ARHGEF6Q15052 776 aa4.84□□□□□ -1.63
TOP2A-201ENST00000423485 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.84□□□□□ -1.63
TOP2A-201ENST00000423485 GRM1Q13255 1194 aa4.84□□□□□ -1.64
TOP2A-201ENST00000423485 NCAPD3P42695 1498 aa4.84□□□□□ -1.64
TOP2A-201ENST00000423485 DMXL1Q9Y485 3027 aa4.83□□□□□ -1.64
TOP2A-201ENST00000423485 STK32BQ9NY57 414 aa4.83□□□□□ -1.64
TOP2A-201ENST00000423485 WASHC2CQ9Y4E1 1318 aa4.83□□□□□ -1.64
TOP2A-201ENST00000423485 RFX1P22670 979 aa4.83□□□□□ -1.64
TOP2A-201ENST00000423485 POTEDQ86YR6 584 aa4.82□□□□□ -1.64
TOP2A-201ENST00000423485 IGF1RP08069 1367 aa4.82□□□□□ -1.64
TOP2A-201ENST00000423485 JPH4Q96JJ6 628 aa4.82□□□□□ -1.64
TOP2A-201ENST00000423485 PTPRGP23470 1445 aa4.81□□□□□ -1.64
TOP2A-201ENST00000423485 ABCA5Q8WWZ7 1642 aa4.81□□□□□ -1.64
TOP2A-201ENST00000423485 NGDNQ8NEJ9 315 aaKnown RBP4.81□□□□□ -1.64
TOP2A-201ENST00000423485 TEX14Q8IWB6 1497 aa4.81□□□□□ -1.64
TOP2A-201ENST00000423485 CTDP1Q9Y5B0 961 aaPredicted RBP4.81□□□□□ -1.64
TOP2A-201ENST00000423485 URB2Q14146 1524 aaKnown RBP4.81□□□□□ -1.64
TOP2A-201ENST00000423485 C11orf95C9JLR9 678 aaPredicted RBP4.81□□□□□ -1.64
TOP2A-201ENST00000423485 SYTL4Q96C24 671 aaPredicted RBP4.81□□□□□ -1.64
TOP2A-201ENST00000423485 SMG1Q96Q15 3661 aaKnown RBP4.81□□□□□ -1.64
TOP2A-201ENST00000423485 DHX57Q6P158 1386 aaKnown RBP4.8□□□□□ -1.64
TOP2A-201ENST00000423485 GIGYF1O75420 1035 aaPredicted RBP4.8□□□□□ -1.64
TOP2A-201ENST00000423485 SAMD9Q5K651 1589 aa4.8□□□□□ -1.64
TOP2A-201ENST00000423485 CFDP1Q9UEE9 299 aaPredicted RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms