RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 PDCL3Q9H2J4 239 aa9.02□□□□□ -0.97
CNOT4-205ENST00000423368 IGSF3O75054 1194 aa9.01□□□□□ -0.97
CNOT4-205ENST00000423368 SPRYD3Q8NCJ5 442 aa9.01□□□□□ -0.97
CNOT4-205ENST00000423368 SECISBP2LQ93073 1101 aaKnown RBP9□□□□□ -0.97
CNOT4-205ENST00000423368 ZBTB9Q96C00 473 aa9□□□□□ -0.97
CNOT4-205ENST00000423368 IPO4Q8TEX9 1081 aaKnown RBP9□□□□□ -0.97
CNOT4-205ENST00000423368 P3H3Q8IVL6 736 aa9□□□□□ -0.97
CNOT4-205ENST00000423368 CDK11BP21127 795 aaKnown RBP8.99□□□□□ -0.97
CNOT4-205ENST00000423368 PPP1R15AO75807 674 aaPredicted RBP8.99□□□□□ -0.97
CNOT4-205ENST00000423368 KIAA1211Q6ZU35 1233 aa8.99□□□□□ -0.97
CNOT4-205ENST00000423368 C14orf37Q86TY3 774 aa8.99□□□□□ -0.97
CNOT4-205ENST00000423368 CCER2I3L3R5 266 aa8.99□□□□□ -0.97
CNOT4-205ENST00000423368 DNAJC5Q9H3Z4 198 aa8.99□□□□□ -0.97
CNOT4-205ENST00000423368 SPDYE4A6NLX3 237 aa8.98□□□□□ -0.97
CNOT4-205ENST00000423368 AKNAQ7Z591 1439 aa8.98□□□□□ -0.97
CNOT4-205ENST00000423368 CEP162Q5TB80 1403 aa8.97□□□□□ -0.97
CNOT4-205ENST00000423368 CLCN1P35523 988 aa8.97□□□□□ -0.97
CNOT4-205ENST00000423368 DHX57Q6P158 1386 aaKnown RBP8.96□□□□□ -0.97
CNOT4-205ENST00000423368 XRCC6P12956 609 aaKnown RBP eCLIP8.96□□□□□ -0.97
CNOT4-205ENST00000423368 CHMP4CQ96CF2 233 aa8.96□□□□□ -0.98
CNOT4-205ENST00000423368 MRS2Q9HD23 443 aa8.96□□□□□ -0.98
CNOT4-205ENST00000423368 DNTTIP2Q5QJE6 756 aaKnown RBP8.95□□□□□ -0.98
CNOT4-205ENST00000423368 TRIM44Q96DX7 344 aaPredicted RBP8.95□□□□□ -0.98
CNOT4-205ENST00000423368 BACH2Q9BYV9 841 aa8.95□□□□□ -0.98
CNOT4-205ENST00000423368 POLR3GLQ9BT43 218 aa8.94□□□□□ -0.98
CNOT4-205ENST00000423368 TMEM51Q9NW97 253 aa8.94□□□□□ -0.98
CNOT4-205ENST00000423368 ERBB4Q15303 1308 aa8.94□□□□□ -0.98
CNOT4-205ENST00000423368 PPP4R3BQ5MIZ7 849 aa8.93□□□□□ -0.98
CNOT4-205ENST00000423368 EXOC6Q8TAG9 804 aa8.93□□□□□ -0.98
CNOT4-205ENST00000423368 GOLGA6L3A6NEY3 463 aa8.93□□□□□ -0.98
CNOT4-205ENST00000423368 ESPNB1AK53 854 aa8.93□□□□□ -0.98
CNOT4-205ENST00000423368 FTSJ3Q8IY81 847 aaKnown RBP8.93□□□□□ -0.98
CNOT4-205ENST00000423368 RSPH4AQ5TD94 716 aa8.93□□□□□ -0.98
CNOT4-205ENST00000423368 R3HCC1Q9Y3T6 440 aaKnown RBP8.93□□□□□ -0.98
CNOT4-205ENST00000423368 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.92□□□□□ -0.98
CNOT4-205ENST00000423368 BRD2P25440 801 aaKnown RBP8.92□□□□□ -0.98
CNOT4-205ENST00000423368 CGNQ9P2M7 1197 aaKnown RBP8.92□□□□□ -0.98
CNOT4-205ENST00000423368 DMRT2Q9Y5R5 561 aa8.92□□□□□ -0.98
CNOT4-205ENST00000423368 L1TD1Q5T7N2 865 aaKnown RBP8.91□□□□□ -0.98
CNOT4-205ENST00000423368 TMC1Q8TDI8 760 aa8.91□□□□□ -0.98
CNOT4-205ENST00000423368 TNNT2P45379 298 aaPredicted RBP8.91□□□□□ -0.98
CNOT4-205ENST00000423368 MYH16Q9H6N6 1097 aa8.9□□□□□ -0.98
CNOT4-205ENST00000423368 ECM2O94769 699 aaPredicted RBP8.9□□□□□ -0.98
CNOT4-205ENST00000423368 CBX1P83916 185 aa8.9□□□□□ -0.98
CNOT4-205ENST00000423368 ZNF326Q5BKZ1 582 aaKnown RBP8.9□□□□□ -0.98
CNOT4-205ENST00000423368 SAMD1Q6SPF0 538 aaPredicted RBP8.9□□□□□ -0.99
CNOT4-205ENST00000423368 CNPY4Q8N129 248 aa8.9□□□□□ -0.99
CNOT4-205ENST00000423368 RGL2O15211 777 aa8.89□□□□□ -0.99
CNOT4-205ENST00000423368 TCERG1O14776 1098 aaKnown RBP8.88□□□□□ -0.99
CNOT4-205ENST00000423368 JARID2Q92833 1246 aaPredicted RBP8.87□□□□□ -0.99
CNOT4-205ENST00000423368 NACADO15069 1562 aa8.87□□□□□ -0.99
CNOT4-205ENST00000423368 PLIN1O60240 522 aa8.87□□□□□ -0.99
CNOT4-205ENST00000423368 RIPK4P57078 832 aa8.87□□□□□ -0.99
CNOT4-205ENST00000423368 TSC1Q92574 1164 aa8.86□□□□□ -0.99
CNOT4-205ENST00000423368 TPM2P07951 284 aa8.86□□□□□ -0.99
CNOT4-205ENST00000423368 WWC1Q8IX03 1113 aa8.86□□□□□ -0.99
CNOT4-205ENST00000423368 TRERF1Q96PN7 1200 aa8.86□□□□□ -0.99
CNOT4-205ENST00000423368 FAM177BA6PVY3 158 aa8.85□□□□□ -0.99
CNOT4-205ENST00000423368 KCNG1Q9UIX4 513 aa8.85□□□□□ -0.99
CNOT4-205ENST00000423368 PATL2C9JE40 543 aaKnown RBP8.85□□□□□ -0.99
CNOT4-205ENST00000423368 MKRN4PQ13434 485 aaPredicted RBP8.84□□□□□ -0.99
CNOT4-205ENST00000423368 ZNF526Q8TF50 670 aaPredicted RBP8.84□□□□□ -0.99
CNOT4-205ENST00000423368 NCLP19338 710 aaKnown RBP8.84□□□□□ -0.99
CNOT4-205ENST00000423368 APPP05067 770 aa8.83□□□□□ -1
CNOT4-205ENST00000423368 UQCRHLA0A096LP55 91 aa8.83□□□□□ -1
CNOT4-205ENST00000423368 UQCRHP07919 91 aa8.83□□□□□ -1
CNOT4-205ENST00000423368 SMAP1Q8IYB5 467 aaPredicted RBP8.83□□□□□ -1
CNOT4-205ENST00000423368 IRX3P78415 501 aaPredicted RBP8.82□□□□□ -1
CNOT4-205ENST00000423368 NGEFQ8N5V2 710 aa8.81□□□□□ -1
CNOT4-205ENST00000423368 XPCQ01831 940 aaPredicted RBP8.81□□□□□ -1
CNOT4-205ENST00000423368 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
CNOT4-205ENST00000423368 EEA1Q15075 1411 aa8.81□□□□□ -1
CNOT4-205ENST00000423368 SOX12O15370 315 aa8.8□□□□□ -1
CNOT4-205ENST00000423368 ZSCAN20P17040 1043 aaPredicted RBP8.8□□□□□ -1
CNOT4-205ENST00000423368 DMTNQ08495 405 aa8.8□□□□□ -1
CNOT4-205ENST00000423368 ZNF219Q9P2Y4 722 aaPredicted RBP8.8□□□□□ -1
CNOT4-205ENST00000423368 CENPJQ9HC77 1338 aaPredicted RBP8.8□□□□□ -1
CNOT4-205ENST00000423368 MSNP26038 577 aaKnown RBP8.79□□□□□ -1
CNOT4-205ENST00000423368 KCNJ4P48050 445 aa8.79□□□□□ -1
CNOT4-205ENST00000423368 MPNDQ8N594 471 aa8.79□□□□□ -1
CNOT4-205ENST00000423368 EP400NLQ6ZTU2 488 aa8.79□□□□□ -1
CNOT4-205ENST00000423368 TEX2Q8IWB9 1127 aa8.78□□□□□ -1
CNOT4-205ENST00000423368 ZNF771Q7L3S4 317 aaPredicted RBP8.78□□□□□ -1
CNOT4-205ENST00000423368 MLECQ14165 292 aa8.78□□□□□ -1
CNOT4-205ENST00000423368 GRPEL1Q9HAV7 217 aa8.78□□□□□ -1
CNOT4-205ENST00000423368 NUDCQ9Y266 331 aa8.78□□□□□ -1
CNOT4-205ENST00000423368 ZBED9Q6R2W3 1325 aa8.77□□□□□ -1.01
CNOT4-205ENST00000423368 RGS22Q8NE09 1264 aa8.77□□□□□ -1.01
CNOT4-205ENST00000423368 WDR97A6NE52 1622 aa8.77□□□□□ -1.01
CNOT4-205ENST00000423368 TMED8Q6PL24 325 aaPredicted RBP8.76□□□□□ -1.01
CNOT4-205ENST00000423368 SPOCK2Q92563 424 aa8.76□□□□□ -1.01
CNOT4-205ENST00000423368 PRR29P0C7W0 189 aa8.76□□□□□ -1.01
CNOT4-205ENST00000423368 WRNQ14191 1432 aaPredicted RBP eCLIP8.75□□□□□ -1.01
CNOT4-205ENST00000423368 CHGAP10645 457 aaKnown RBP8.75□□□□□ -1.01
CNOT4-205ENST00000423368 SLC52A1Q9NWF4 448 aa8.75□□□□□ -1.01
CNOT4-205ENST00000423368 TRAK2O60296 914 aa8.74□□□□□ -1.01
CNOT4-205ENST00000423368 HDAC5Q9UQL6 1122 aa8.74□□□□□ -1.01
CNOT4-205ENST00000423368 MRE11P49959 708 aa8.74□□□□□ -1.01
CNOT4-205ENST00000423368 KANK4Q5T7N3 995 aaPredicted RBP8.74□□□□□ -1.01
CNOT4-205ENST00000423368 TMX1Q9H3N1 280 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms