RNA–Protein interactions for RNA: ENST00000423275.5

RAF1-203, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 2,354 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-203ENST00000423275 MPHOSPH9Q99550 1183 aa26.5■■□□□ 1.83
RAF1-203ENST00000423275 CDK11AQ9UQ88 783 aaPredicted RBP26.5■■□□□ 1.83
RAF1-203ENST00000423275 JPH4Q96JJ6 628 aa26.49■■□□□ 1.83
RAF1-203ENST00000423275 NUP160Q12769 1436 aa26.48■■□□□ 1.83
RAF1-203ENST00000423275 FOXD1Q16676 465 aa26.47■■□□□ 1.83
RAF1-203ENST00000423275 DNMT1P26358 1616 aaKnown RBP26.47■■□□□ 1.83
RAF1-203ENST00000423275 TROQ12816 1431 aaPredicted RBP26.46■■□□□ 1.83
RAF1-203ENST00000423275 ROCK1Q13464 1354 aa26.45■■□□□ 1.82
RAF1-203ENST00000423275 CARMIL2Q6F5E8 1435 aa26.41■■□□□ 1.82
RAF1-203ENST00000423275 KIF14Q15058 1648 aa26.4■■□□□ 1.82
RAF1-203ENST00000423275 CFDP1Q9UEE9 299 aaPredicted RBP26.38■■□□□ 1.81
RAF1-203ENST00000423275 ANP32CO43423 234 aa26.38■■□□□ 1.81
RAF1-203ENST00000423275 GPATCH8Q9UKJ3 1502 aaKnown RBP26.37■■□□□ 1.81
RAF1-203ENST00000423275 CAMSAP2Q08AD1 1489 aa26.37■■□□□ 1.81
RAF1-203ENST00000423275 DNAJC5Q9H3Z4 198 aa26.35■■□□□ 1.81
RAF1-203ENST00000423275 ZNF777Q9ULD5 760 aaPredicted RBP26.34■■□□□ 1.81
RAF1-203ENST00000423275 CCER2I3L3R5 266 aa26.33■■□□□ 1.81
RAF1-203ENST00000423275 L3MBTL2Q969R5 705 aa26.33■■□□□ 1.81
RAF1-203ENST00000423275 ADCY10Q96PN6 1610 aa26.32■■□□□ 1.8
RAF1-203ENST00000423275 ANKRD30BQ9BXX2 1392 aa26.32■■□□□ 1.8
RAF1-203ENST00000423275 ITSN2Q9NZM3 1697 aa26.3■■□□□ 1.8
RAF1-203ENST00000423275 HSPA5P11021 654 aaKnown RBP26.29■■□□□ 1.8
RAF1-203ENST00000423275 ABCA8O94911 1581 aa26.29■■□□□ 1.8
RAF1-203ENST00000423275 SLC4A1APQ9BWU0 796 aaKnown RBP26.28■■□□□ 1.8
RAF1-203ENST00000423275 NCOA1Q15788 1441 aa26.27■■□□□ 1.8
RAF1-203ENST00000423275 ATP10BO94823 1461 aa26.26■■□□□ 1.79
RAF1-203ENST00000423275 RPRD2Q5VT52 1461 aaKnown RBP26.25■■□□□ 1.79
RAF1-203ENST00000423275 PLEKHD1A6NEE1 506 aa26.24■■□□□ 1.79
RAF1-203ENST00000423275 WASHC2AQ641Q2 1341 aa26.23■■□□□ 1.79
RAF1-203ENST00000423275 PZPP20742 1482 aa26.22■■□□□ 1.79
RAF1-203ENST00000423275 NBPF8Q3BBV2 869 aa26.2■■□□□ 1.79
RAF1-203ENST00000423275 ADGBQ8N7X0 1667 aa26.2■■□□□ 1.78
RAF1-203ENST00000423275 ABCC10Q5T3U5 1492 aa26.2■■□□□ 1.78
RAF1-203ENST00000423275 CROCC2H7BZ55 1655 aa26.19■■□□□ 1.78
RAF1-203ENST00000423275 EIF4G2P78344 907 aaKnown RBP eCLIP26.19■■□□□ 1.78
RAF1-203ENST00000423275 TEX14Q8IWB6 1497 aa26.19■■□□□ 1.78
RAF1-203ENST00000423275 ADGRL2O95490 1459 aa26.19■■□□□ 1.78
RAF1-203ENST00000423275 CDC42BPAQ5VT25 1732 aa26.18■■□□□ 1.78
RAF1-203ENST00000423275 ANKRD30AQ9BXX3 1397 aa26.13■■□□□ 1.77
RAF1-203ENST00000423275 PTPRGP23470 1445 aa26.13■■□□□ 1.77
RAF1-203ENST00000423275 C11orf95C9JLR9 678 aaPredicted RBP26.13■■□□□ 1.77
RAF1-203ENST00000423275 FKBP8Q14318 412 aa26.12■■□□□ 1.77
RAF1-203ENST00000423275 BCANQ96GW7 911 aa26.12■■□□□ 1.77
RAF1-203ENST00000423275 ANKRD50Q9ULJ7 1429 aa26.09■■□□□ 1.77
RAF1-203ENST00000423275 PKD2Q13563 968 aa26.07■■□□□ 1.76
RAF1-203ENST00000423275 KIAA1107Q9UPP5 1409 aa26.07■■□□□ 1.76
RAF1-203ENST00000423275 C9orf84Q5VXU9 1444 aa26.06■■□□□ 1.76
RAF1-203ENST00000423275 CHD1O14646 1710 aa26.06■■□□□ 1.76
RAF1-203ENST00000423275 HNRNPMP52272 730 aaKnown RBP eCLIP26.05■■□□□ 1.761e-7■■■■■ 31.3
RAF1-203ENST00000423275 SHANK2Q9UPX8 1470 aa26.02■■□□□ 1.76
RAF1-203ENST00000423275 TSHZ2Q9NRE2 1034 aa26.02■■□□□ 1.76
RAF1-203ENST00000423275 CCDC7Q96M83 1385 aa26.02■■□□□ 1.76
RAF1-203ENST00000423275 SPATA31E1Q6ZUB1 1445 aa26.01■■□□□ 1.75
RAF1-203ENST00000423275 CNTLNQ9NXG0 1405 aa26■■□□□ 1.75
RAF1-203ENST00000423275 TSPY4P0CV99 314 aa25.99■■□□□ 1.75
RAF1-203ENST00000423275 TSPY10P0CW01 314 aa25.99■■□□□ 1.75
RAF1-203ENST00000423275 NUP155O75694 1391 aa25.99■■□□□ 1.75
RAF1-203ENST00000423275 MBD5Q9P267 1494 aa25.98■■□□□ 1.75
RAF1-203ENST00000423275 NEFLP07196 543 aa25.97■■□□□ 1.75
RAF1-203ENST00000423275 HNRNPUQ00839 825 aaKnown RBP eCLIP25.96■■□□□ 1.75
RAF1-203ENST00000423275 CDC42BPBQ9Y5S2 1711 aa25.95■■□□□ 1.74
RAF1-203ENST00000423275 KIF15Q9NS87 1388 aa25.95■■□□□ 1.74
RAF1-203ENST00000423275 ERCC6L2Q5T890 1561 aa25.94■■□□□ 1.74
RAF1-203ENST00000423275 SAMD9LQ8IVG5 1584 aa25.94■■□□□ 1.74
RAF1-203ENST00000423275 KIF7Q2M1P5 1343 aa25.93■■□□□ 1.74
RAF1-203ENST00000423275 ZNF326Q5BKZ1 582 aaKnown RBP25.93■■□□□ 1.74
RAF1-203ENST00000423275 ARHGEF5Q12774 1597 aa25.93■■□□□ 1.74
RAF1-203ENST00000423275 SHROOM2Q13796 1616 aa25.93■■□□□ 1.74
RAF1-203ENST00000423275 CCDC184Q52MB2 194 aa25.92■■□□□ 1.74
RAF1-203ENST00000423275 PREX2Q70Z35 1606 aa25.9■■□□□ 1.74
RAF1-203ENST00000423275 CCDC141Q6ZP82 1450 aa25.88■■□□□ 1.73
RAF1-203ENST00000423275 KDM5DQ9BY66 1539 aa25.88■■□□□ 1.73
RAF1-203ENST00000423275 PRKRIP1Q9H875 184 aaPredicted RBP25.87■■□□□ 1.73
RAF1-203ENST00000423275 TTC37Q6PGP7 1564 aa25.86■■□□□ 1.73
RAF1-203ENST00000423275 POLR1AO95602 1720 aaPredicted RBP25.84■■□□□ 1.73
RAF1-203ENST00000423275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.84■■□□□ 1.731e-6■■■■□ 19.4
RAF1-203ENST00000423275 USP47Q96K76 1375 aa25.83■■□□□ 1.72
RAF1-203ENST00000423275 SYCP2Q9BX26 1530 aa25.82■■□□□ 1.72
RAF1-203ENST00000423275 BCORL1Q5H9F3 1711 aa25.8■■□□□ 1.72
RAF1-203ENST00000423275 ARHGAP5Q13017 1502 aa25.8■■□□□ 1.72
RAF1-203ENST00000423275 ABCC2Q92887 1545 aa25.8■■□□□ 1.72
RAF1-203ENST00000423275 RSPH4AQ5TD94 716 aa25.78■■□□□ 1.72
RAF1-203ENST00000423275 UHRF1BP1Q6BDS2 1440 aa25.78■■□□□ 1.72
RAF1-203ENST00000423275 KDM5CP41229 1560 aa25.77■■□□□ 1.72
RAF1-203ENST00000423275 KDM2AQ9Y2K7 1162 aa25.76■■□□□ 1.71
RAF1-203ENST00000423275 FAM135AQ9P2D6 1515 aa25.75■■□□□ 1.71
RAF1-203ENST00000423275 MRS2Q9HD23 443 aa25.75■■□□□ 1.71
RAF1-203ENST00000423275 FAM9BQ8IZU0 186 aa25.75■■□□□ 1.71
RAF1-203ENST00000423275 POLR3GLQ9BT43 218 aa25.74■■□□□ 1.71
RAF1-203ENST00000423275 RALGAPBQ86X10 1494 aa25.73■■□□□ 1.71
RAF1-203ENST00000423275 ARHGEF12Q9NZN5 1544 aa25.73■■□□□ 1.71
RAF1-203ENST00000423275 DCAF11Q8TEB1 546 aa25.72■■□□□ 1.71
RAF1-203ENST00000423275 CARD11Q9BXL7 1154 aa25.7■■□□□ 1.71
RAF1-203ENST00000423275 DHX29Q7Z478 1369 aaKnown RBP25.7■■□□□ 1.7
RAF1-203ENST00000423275 MYO5CQ9NQX4 1742 aa25.7■■□□□ 1.7
RAF1-203ENST00000423275 IRX6P78412 446 aaPredicted RBP25.7■■□□□ 1.7
RAF1-203ENST00000423275 MYT1Q01538 1121 aa25.7■■□□□ 1.7
RAF1-203ENST00000423275 MAST1Q9Y2H9 1570 aa25.7■■□□□ 1.7
RAF1-203ENST00000423275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.68■■□□□ 1.73e-6■□□□□ 11.3
RAF1-203ENST00000423275 CNGB1Q14028 1251 aaPredicted RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms