RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 IPO9Q96P70 1041 aaKnown RBP22.63■■□□□ 1.21
NPC1L1-203ENST00000423141 SAMD9Q5K651 1589 aa22.63■■□□□ 1.21
NPC1L1-203ENST00000423141 ARHGEF11O15085 1522 aa22.61■■□□□ 1.21
NPC1L1-203ENST00000423141 ANP32AP39687 249 aaKnown RBP22.61■■□□□ 1.21
NPC1L1-203ENST00000423141 DNMBPQ6XZF7 1577 aa22.6■■□□□ 1.21
NPC1L1-203ENST00000423141 SPATA31E1Q6ZUB1 1445 aa22.6■■□□□ 1.21
NPC1L1-203ENST00000423141 NUDCQ9Y266 331 aa22.6■■□□□ 1.21
NPC1L1-203ENST00000423141 TOPBP1Q92547 1522 aa22.59■■□□□ 1.21
NPC1L1-203ENST00000423141 TCOF1Q13428 1488 aaKnown RBP22.58■■□□□ 1.21
NPC1L1-203ENST00000423141 RNF123Q5XPI4 1314 aa22.58■■□□□ 1.21
NPC1L1-203ENST00000423141 TEX14Q8IWB6 1497 aa22.56■■□□□ 1.2
NPC1L1-203ENST00000423141 ZBTB47Q9UFB7 747 aaPredicted RBP22.55■■□□□ 1.2
NPC1L1-203ENST00000423141 ANKRD30BQ9BXX2 1392 aa22.55■■□□□ 1.2
NPC1L1-203ENST00000423141 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
NPC1L1-203ENST00000423141 RPRD2Q5VT52 1461 aaKnown RBP22.54■■□□□ 1.2
NPC1L1-203ENST00000423141 DHX29Q7Z478 1369 aaKnown RBP22.53■■□□□ 1.2
NPC1L1-203ENST00000423141 RTL5Q5HYW3 569 aaPredicted RBP22.53■■□□□ 1.2
NPC1L1-203ENST00000423141 POLR3GLQ9BT43 218 aa22.53■■□□□ 1.2
NPC1L1-203ENST00000423141 ABCA5Q8WWZ7 1642 aa22.53■■□□□ 1.2
NPC1L1-203ENST00000423141 PRKCSHP14314 528 aaPredicted RBP22.52■■□□□ 1.2
NPC1L1-203ENST00000423141 TDRD9Q8NDG6 1382 aaKnown RBP22.5■■□□□ 1.19
NPC1L1-203ENST00000423141 POLR1AO95602 1720 aaPredicted RBP22.5■■□□□ 1.19
NPC1L1-203ENST00000423141 ARID3CA6NKF2 412 aa22.49■■□□□ 1.19
NPC1L1-203ENST00000423141 ANO8Q9HCE9 1232 aaPredicted RBP22.49■■□□□ 1.19
NPC1L1-203ENST00000423141 NPM2Q86SE8 214 aaKnown RBP22.45■■□□□ 1.18
NPC1L1-203ENST00000423141 IL27Q8NEV9 243 aa22.44■■□□□ 1.18
NPC1L1-203ENST00000423141 SLC4A1APQ9BWU0 796 aaKnown RBP22.44■■□□□ 1.18
NPC1L1-203ENST00000423141 NESP48681 1621 aa22.44■■□□□ 1.18
NPC1L1-203ENST00000423141 PNISRQ8TF01 805 aaKnown RBP22.42■■□□□ 1.18
NPC1L1-203ENST00000423141 CDK13Q14004 1512 aaKnown RBP22.42■■□□□ 1.18
NPC1L1-203ENST00000423141 BCORL1Q5H9F3 1711 aa22.42■■□□□ 1.18
NPC1L1-203ENST00000423141 ZNF326Q5BKZ1 582 aaKnown RBP22.41■■□□□ 1.18
NPC1L1-203ENST00000423141 MIA2Q96PC5 1412 aa22.4■■□□□ 1.18
NPC1L1-203ENST00000423141 EPRSP07814 1512 aaKnown RBP22.39■■□□□ 1.18
NPC1L1-203ENST00000423141 SALL2Q9Y467 1007 aaPredicted RBP22.39■■□□□ 1.17
NPC1L1-203ENST00000423141 USP47Q96K76 1375 aa22.38■■□□□ 1.17
NPC1L1-203ENST00000423141 LAS1LQ9Y4W2 734 aaKnown RBP22.38■■□□□ 1.17
NPC1L1-203ENST00000423141 TMC1Q8TDI8 760 aa22.37■■□□□ 1.17
NPC1L1-203ENST00000423141 RTN4Q9NQC3 1192 aaKnown RBP22.37■■□□□ 1.17
NPC1L1-203ENST00000423141 ZNF644Q9H582 1327 aaPredicted RBP22.37■■□□□ 1.17
NPC1L1-203ENST00000423141 DAPK1P53355 1430 aa22.36■■□□□ 1.17
NPC1L1-203ENST00000423141 GAPVD1Q14C86 1478 aa22.36■■□□□ 1.17
NPC1L1-203ENST00000423141 EXOC6Q8TAG9 804 aa22.36■■□□□ 1.17
NPC1L1-203ENST00000423141 KIF21AQ7Z4S6 1674 aa22.34■■□□□ 1.17
NPC1L1-203ENST00000423141 URB2Q14146 1524 aaKnown RBP22.34■■□□□ 1.17
NPC1L1-203ENST00000423141 ABCC5O15440 1437 aa22.33■■□□□ 1.17
NPC1L1-203ENST00000423141 ROCK1Q13464 1354 aa22.33■■□□□ 1.16
NPC1L1-203ENST00000423141 LAMC3Q9Y6N6 1575 aa22.33■■□□□ 1.16
NPC1L1-203ENST00000423141 RRP1P56182 461 aaKnown RBP22.33■■□□□ 1.16
NPC1L1-203ENST00000423141 NEFMP07197 916 aa22.31■■□□□ 1.16
NPC1L1-203ENST00000423141 PDE4AP27815 886 aa22.31■■□□□ 1.16
NPC1L1-203ENST00000423141 MBD5Q9P267 1494 aa22.3■■□□□ 1.16
NPC1L1-203ENST00000423141 PZPP20742 1482 aa22.28■■□□□ 1.16
NPC1L1-203ENST00000423141 TCERG1O14776 1098 aaKnown RBP22.27■■□□□ 1.16
NPC1L1-203ENST00000423141 LRPPRCP42704 1394 aaKnown RBP22.26■■□□□ 1.15
NPC1L1-203ENST00000423141 KDM5CP41229 1560 aa22.26■■□□□ 1.15
NPC1L1-203ENST00000423141 DNMT1P26358 1616 aaKnown RBP22.26■■□□□ 1.15
NPC1L1-203ENST00000423141 BACH2Q9BYV9 841 aa22.25■■□□□ 1.15
NPC1L1-203ENST00000423141 RCAN3Q9UKA8 241 aa22.24■■□□□ 1.15
NPC1L1-203ENST00000423141 WDR62O43379 1518 aa22.23■■□□□ 1.15
NPC1L1-203ENST00000423141 SKAP1Q86WV1 359 aa22.23■■□□□ 1.15
NPC1L1-203ENST00000423141 ARID4BQ4LE39 1312 aaPredicted RBP22.21■■□□□ 1.15
NPC1L1-203ENST00000423141 KIF15Q9NS87 1388 aa22.2■■□□□ 1.15
NPC1L1-203ENST00000423141 KIF14Q15058 1648 aa22.2■■□□□ 1.14
NPC1L1-203ENST00000423141 MYBBP1AQ9BQG0 1328 aaKnown RBP22.18■■□□□ 1.14
NPC1L1-203ENST00000423141 PKD2Q13563 968 aa22.18■■□□□ 1.14
NPC1L1-203ENST00000423141 USP35Q9P2H5 1018 aa22.18■■□□□ 1.14
NPC1L1-203ENST00000423141 BRD4O60885 1362 aaPredicted RBP22.18■■□□□ 1.14
NPC1L1-203ENST00000423141 ROCK2O75116 1388 aaKnown RBP22.18■■□□□ 1.14
NPC1L1-203ENST00000423141 KIAA1107Q9UPP5 1409 aa22.17■■□□□ 1.14
NPC1L1-203ENST00000423141 CARD11Q9BXL7 1154 aa22.17■■□□□ 1.14
NPC1L1-203ENST00000423141 IQGAP2Q13576 1575 aa22.16■■□□□ 1.14
NPC1L1-203ENST00000423141 PLIN1O60240 522 aa22.15■■□□□ 1.14
NPC1L1-203ENST00000423141 CDCA7LQ96GN5 454 aa22.15■■□□□ 1.14
NPC1L1-203ENST00000423141 ST20-MTHFSA0A0A6YYL1 179 aa22.15■■□□□ 1.14
NPC1L1-203ENST00000423141 MS4A1P11836 297 aa22.15■■□□□ 1.14
NPC1L1-203ENST00000423141 WASHC2CQ9Y4E1 1318 aa22.15■■□□□ 1.14
NPC1L1-203ENST00000423141 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.14■■□□□ 1.13
NPC1L1-203ENST00000423141 PPM1GO15355 546 aaPredicted RBP22.12■■□□□ 1.13
NPC1L1-203ENST00000423141 RALBP1Q15311 655 aa22.12■■□□□ 1.13
NPC1L1-203ENST00000423141 RALGAPBQ86X10 1494 aa22.11■■□□□ 1.13
NPC1L1-203ENST00000423141 KDM2AQ9Y2K7 1162 aa22.1■■□□□ 1.13
NPC1L1-203ENST00000423141 BRPF3Q9ULD4 1205 aa22.09■■□□□ 1.13
NPC1L1-203ENST00000423141 UHRF1BP1Q6BDS2 1440 aa22.08■■□□□ 1.13
NPC1L1-203ENST00000423141 SLC4A3P48751 1232 aa22.07■■□□□ 1.12
NPC1L1-203ENST00000423141 CAMSAP2Q08AD1 1489 aa22.06■■□□□ 1.12
NPC1L1-203ENST00000423141 ZNF777Q9ULD5 760 aaPredicted RBP22.06■■□□□ 1.12
NPC1L1-203ENST00000423141 CRBNQ96SW2 442 aa22.06■■□□□ 1.12
NPC1L1-203ENST00000423141 NUP153P49790 1475 aaKnown RBP22.05■■□□□ 1.12
NPC1L1-203ENST00000423141 PDE3BQ13370 1112 aa22.04■■□□□ 1.12
NPC1L1-203ENST00000423141 NLRP13Q86W25 1043 aa22.04■■□□□ 1.12
NPC1L1-203ENST00000423141 CFDP1Q9UEE9 299 aaPredicted RBP22.04■■□□□ 1.12
NPC1L1-203ENST00000423141 KTN1Q86UP2 1357 aaKnown RBP22.04■■□□□ 1.12
NPC1L1-203ENST00000423141 TARBP1Q13395 1621 aaKnown RBP22.03■■□□□ 1.12
NPC1L1-203ENST00000423141 E9PCH4 1651 aa22.02■■□□□ 1.12
NPC1L1-203ENST00000423141 PRG4Q92954 1404 aaPredicted RBP22.02■■□□□ 1.12
NPC1L1-203ENST00000423141 NFKBIBQ15653 356 aa22.01■■□□□ 1.11
NPC1L1-203ENST00000423141 GSE1Q14687 1217 aa22.01■■□□□ 1.11
NPC1L1-203ENST00000423141 PARD3Q8TEW0 1356 aa22.01■■□□□ 1.11
NPC1L1-203ENST00000423141 DCAF11Q8TEB1 546 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms