RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 ABCA9Q8IUA7 1624 aa14.48□□□□□ -0.09
PDGFC-202ENST00000422544 SIGLEC1Q9BZZ2 1709 aa14.48□□□□□ -0.09
PDGFC-202ENST00000422544 LRRC9Q6ZRR7 1453 aa14.48□□□□□ -0.09
PDGFC-202ENST00000422544 KIF14Q15058 1648 aa14.48□□□□□ -0.09
PDGFC-202ENST00000422544 MADDQ8WXG6 1647 aa14.46□□□□□ -0.09
PDGFC-202ENST00000422544 PLCH2O75038 1416 aa14.46□□□□□ -0.09
PDGFC-202ENST00000422544 TTC37Q6PGP7 1564 aa14.46□□□□□ -0.09
PDGFC-202ENST00000422544 LMTK3Q96Q04 1460 aa14.45□□□□□ -0.1
PDGFC-202ENST00000422544 PPARGC1BQ86YN6 1023 aaKnown RBP14.45□□□□□ -0.1
PDGFC-202ENST00000422544 EHBP1L1Q8N3D4 1523 aa14.45□□□□□ -0.1
PDGFC-202ENST00000422544 EFCAB2Q5VUJ9 269 aa14.44□□□□□ -0.1
PDGFC-202ENST00000422544 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
PDGFC-202ENST00000422544 CFDP1Q9UEE9 299 aaPredicted RBP14.42□□□□□ -0.1
PDGFC-202ENST00000422544 NCOA2Q15596 1464 aa14.42□□□□□ -0.1
PDGFC-202ENST00000422544 GPATCH8Q9UKJ3 1502 aaKnown RBP14.41□□□□□ -0.1
PDGFC-202ENST00000422544 ZNF777Q9ULD5 760 aaPredicted RBP14.41□□□□□ -0.1
PDGFC-202ENST00000422544 FANCAO15360 1455 aa14.41□□□□□ -0.1
PDGFC-202ENST00000422544 PHLDB1Q86UU1 1377 aa14.39□□□□□ -0.11
PDGFC-202ENST00000422544 AKNAQ7Z591 1439 aa14.39□□□□□ -0.11
PDGFC-202ENST00000422544 RIMS1Q86UR5 1692 aaKnown RBP14.39□□□□□ -0.11
PDGFC-202ENST00000422544 NEO1Q92859 1461 aa14.38□□□□□ -0.11
PDGFC-202ENST00000422544 ARHGAP5Q13017 1502 aa14.38□□□□□ -0.11
PDGFC-202ENST00000422544 RICTORQ6R327 1708 aa14.38□□□□□ -0.11
PDGFC-202ENST00000422544 RAPGEF3O95398 923 aa14.37□□□□□ -0.11
PDGFC-202ENST00000422544 SUPT6HQ7KZ85 1726 aaKnown RBP14.36□□□□□ -0.11
PDGFC-202ENST00000422544 ZNF644Q9H582 1327 aaPredicted RBP14.36□□□□□ -0.11
PDGFC-202ENST00000422544 MYO5CQ9NQX4 1742 aa14.35□□□□□ -0.11
PDGFC-202ENST00000422544 SCAPERQ9BY12 1400 aa14.34□□□□□ -0.11
PDGFC-202ENST00000422544 HNRNPMP52272 730 aaKnown RBP eCLIP14.33□□□□□ -0.12
PDGFC-202ENST00000422544 PREX2Q70Z35 1606 aa14.33□□□□□ -0.12
PDGFC-202ENST00000422544 AFAP1Q8N556 730 aa14.32□□□□□ -0.12
PDGFC-202ENST00000422544 CDC42BPAQ5VT25 1732 aa14.32□□□□□ -0.12
PDGFC-202ENST00000422544 CDC42BPBQ9Y5S2 1711 aa14.32□□□□□ -0.12
PDGFC-202ENST00000422544 MYOM3Q5VTT5 1437 aa14.32□□□□□ -0.12
PDGFC-202ENST00000422544 DENND4BO75064 1496 aaPredicted RBP14.31□□□□□ -0.12
PDGFC-202ENST00000422544 ARHGEF40Q8TER5 1519 aa14.31□□□□□ -0.12
PDGFC-202ENST00000422544 ILDR2Q71H61 639 aa14.3□□□□□ -0.12
PDGFC-202ENST00000422544 CFAP74Q9C0B2 1584 aa14.3□□□□□ -0.12
PDGFC-202ENST00000422544 ARHGEF12Q9NZN5 1544 aa14.29□□□□□ -0.12
PDGFC-202ENST00000422544 STRCQ7RTU9 1775 aa14.29□□□□□ -0.12
PDGFC-202ENST00000422544 HSPA2P54652 639 aa14.28□□□□□ -0.12
PDGFC-202ENST00000422544 MIA2Q96PC5 1412 aa14.28□□□□□ -0.12
PDGFC-202ENST00000422544 KIAA1107Q9UPP5 1409 aa14.28□□□□□ -0.12
PDGFC-202ENST00000422544 TRAPPC8Q9Y2L5 1435 aa14.28□□□□□ -0.12
PDGFC-202ENST00000422544 SAMD9LQ8IVG5 1584 aa14.27□□□□□ -0.12
PDGFC-202ENST00000422544 PLEKHH2Q8IVE3 1493 aa14.26□□□□□ -0.13
PDGFC-202ENST00000422544 POGZQ7Z3K3 1410 aa14.26□□□□□ -0.13
PDGFC-202ENST00000422544 MYT1LQ9UL68 1186 aa14.26□□□□□ -0.13
PDGFC-202ENST00000422544 ITSN2Q9NZM3 1697 aa14.26□□□□□ -0.13
PDGFC-202ENST00000422544 ABCC1P33527 1531 aa14.25□□□□□ -0.13
PDGFC-202ENST00000422544 FGD6Q6ZV73 1430 aa14.25□□□□□ -0.13
PDGFC-202ENST00000422544 FAM50AQ14320 339 aaKnown RBP14.25□□□□□ -0.13
PDGFC-202ENST00000422544 CAMSAP2Q08AD1 1489 aa14.25□□□□□ -0.13
PDGFC-202ENST00000422544 FER1L4A9Z1Z3 1794 aa14.24□□□□□ -0.13
PDGFC-202ENST00000422544 ADRA2BP18089 450 aa14.24□□□□□ -0.13
PDGFC-202ENST00000422544 SYCP2Q9BX26 1530 aa14.24□□□□□ -0.13
PDGFC-202ENST00000422544 MBD5Q9P267 1494 aa14.24□□□□□ -0.13
PDGFC-202ENST00000422544 RSPH4AQ5TD94 716 aa14.23□□□□□ -0.13
PDGFC-202ENST00000422544 ZMYM4Q5VZL5 1548 aa14.23□□□□□ -0.13
PDGFC-202ENST00000422544 ZNF518AQ6AHZ1 1483 aa14.23□□□□□ -0.13
PDGFC-202ENST00000422544 SPAG9O60271 1321 aaKnown RBP14.22□□□□□ -0.13
PDGFC-202ENST00000422544 YEATS2Q9ULM3 1422 aa14.22□□□□□ -0.13
PDGFC-202ENST00000422544 CERKQ8TCT0 537 aa14.21□□□□□ -0.13
PDGFC-202ENST00000422544 PPP6R1Q9UPN7 881 aa14.21□□□□□ -0.13
PDGFC-202ENST00000422544 TSPY4P0CV99 314 aa14.2□□□□□ -0.14
PDGFC-202ENST00000422544 TSPY10P0CW01 314 aa14.2□□□□□ -0.14
PDGFC-202ENST00000422544 TCOF1Q13428 1488 aaKnown RBP14.19□□□□□ -0.14
PDGFC-202ENST00000422544 PTPN23Q9H3S7 1636 aa14.19□□□□□ -0.14
PDGFC-202ENST00000422544 CCDC141Q6ZP82 1450 aa14.18□□□□□ -0.14
PDGFC-202ENST00000422544 MAGI2Q86UL8 1455 aa14.18□□□□□ -0.14
PDGFC-202ENST00000422544 MLH3Q9UHC1 1453 aa14.18□□□□□ -0.14
PDGFC-202ENST00000422544 PREX1Q8TCU6 1659 aa14.17□□□□□ -0.14
PDGFC-202ENST00000422544 KDM5CP41229 1560 aa14.17□□□□□ -0.14
PDGFC-202ENST00000422544 ABCC5O15440 1437 aa14.16□□□□□ -0.14
PDGFC-202ENST00000422544 ITGAEP38570 1179 aa14.16□□□□□ -0.14
PDGFC-202ENST00000422544 CHIC2Q9UKJ5 165 aa14.15□□□□□ -0.14
PDGFC-202ENST00000422544 ZFYVE16Q7Z3T8 1539 aa14.15□□□□□ -0.14
PDGFC-202ENST00000422544 ARHGEF5Q12774 1597 aa14.14□□□□□ -0.15
PDGFC-202ENST00000422544 DAPK1P53355 1430 aa14.14□□□□□ -0.15
PDGFC-202ENST00000422544 RRBP1Q9P2E9 1410 aaKnown RBP14.14□□□□□ -0.15
PDGFC-202ENST00000422544 ARID4BQ4LE39 1312 aaPredicted RBP14.14□□□□□ -0.15
PDGFC-202ENST00000422544 ATP10AO60312 1499 aa14.13□□□□□ -0.15
PDGFC-202ENST00000422544 SOCS7O14512 581 aa14.13□□□□□ -0.15
PDGFC-202ENST00000422544 RTEL1-TNFRSF6BF6WH68 1400 aa14.13□□□□□ -0.15
PDGFC-202ENST00000422544 SETD1BQ9UPS6 1966 aaKnown RBP14.13□□□□□ -0.15
PDGFC-202ENST00000422544 C9orf84Q5VXU9 1444 aa14.12□□□□□ -0.15
PDGFC-202ENST00000422544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.11□□□□□ -0.15
PDGFC-202ENST00000422544 RRP7BPQ9NSQ0 103 aa14.11□□□□□ -0.15
PDGFC-202ENST00000422544 ATP7AQ04656 1500 aa14.1□□□□□ -0.15
PDGFC-202ENST00000422544 LTBP4Q8N2S1 1624 aa14.1□□□□□ -0.15
PDGFC-202ENST00000422544 KIDINS220Q9ULH0 1771 aa14.09□□□□□ -0.15
PDGFC-202ENST00000422544 PTPRKQ15262 1439 aa14.09□□□□□ -0.15
PDGFC-202ENST00000422544 PIAS4Q8N2W9 510 aaPredicted RBP14.09□□□□□ -0.15
PDGFC-202ENST00000422544 SPATA31D1Q6ZQQ2 1576 aa14.09□□□□□ -0.15
PDGFC-202ENST00000422544 MLECQ14165 292 aa14.08□□□□□ -0.16
PDGFC-202ENST00000422544 INO80Q9ULG1 1556 aaPredicted RBP14.08□□□□□ -0.16
PDGFC-202ENST00000422544 DIP2CQ9Y2E4 1556 aa14.08□□□□□ -0.16
PDGFC-202ENST00000422544 DISP3Q9P2K9 1392 aa14.08□□□□□ -0.16
PDGFC-202ENST00000422544 C3P01024 1663 aa14.07□□□□□ -0.16
PDGFC-202ENST00000422544 DNMT1P26358 1616 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms