RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 PLCH2O75038 1416 aa24.31■■□□□ 1.48
DDX55-203ENST00000421670 MYOM3Q5VTT5 1437 aa24.31■■□□□ 1.48
DDX55-203ENST00000421670 CFAP74Q9C0B2 1584 aa24.29■■□□□ 1.48
DDX55-203ENST00000421670 FANCAO15360 1455 aa24.27■■□□□ 1.48
DDX55-203ENST00000421670 SAMD9LQ8IVG5 1584 aa24.26■■□□□ 1.47
DDX55-203ENST00000421670 PTPN23Q9H3S7 1636 aa24.24■■□□□ 1.47
DDX55-203ENST00000421670 FGD6Q6ZV73 1430 aa24.24■■□□□ 1.47
DDX55-203ENST00000421670 TEX14Q8IWB6 1497 aa24.23■■□□□ 1.47
DDX55-203ENST00000421670 CFDP1Q9UEE9 299 aaPredicted RBP24.23■■□□□ 1.47
DDX55-203ENST00000421670 CAMSAP2Q08AD1 1489 aa24.2■■□□□ 1.47
DDX55-203ENST00000421670 MIA2Q96PC5 1412 aa24.2■■□□□ 1.46
DDX55-203ENST00000421670 NEO1Q92859 1461 aa24.19■■□□□ 1.46
DDX55-203ENST00000421670 ABCC1P33527 1531 aa24.19■■□□□ 1.46
DDX55-203ENST00000421670 ZNF777Q9ULD5 760 aaPredicted RBP24.19■■□□□ 1.46
DDX55-203ENST00000421670 EFCAB2Q5VUJ9 269 aa24.17■■□□□ 1.46
DDX55-203ENST00000421670 ZNF644Q9H582 1327 aaPredicted RBP24.16■■□□□ 1.46
DDX55-203ENST00000421670 SYCP2Q9BX26 1530 aa24.16■■□□□ 1.46
DDX55-203ENST00000421670 AKNAQ7Z591 1439 aa24.16■■□□□ 1.46
DDX55-203ENST00000421670 ADGRL1O94910 1474 aa24.16■■□□□ 1.46
DDX55-203ENST00000421670 TCOF1Q13428 1488 aaKnown RBP24.14■■□□□ 1.46
DDX55-203ENST00000421670 RRBP1Q9P2E9 1410 aaKnown RBP24.13■■□□□ 1.45
DDX55-203ENST00000421670 ARHGEF12Q9NZN5 1544 aa24.11■■□□□ 1.45
DDX55-203ENST00000421670 RICTORQ6R327 1708 aa24.1■■□□□ 1.45
DDX55-203ENST00000421670 PLEKHH2Q8IVE3 1493 aa24.1■■□□□ 1.45
DDX55-203ENST00000421670 CROCC2H7BZ55 1655 aa24.08■■□□□ 1.45
DDX55-203ENST00000421670 SCAPERQ9BY12 1400 aa24.08■■□□□ 1.44
DDX55-203ENST00000421670 FAM50AQ14320 339 aaKnown RBP24.08■■□□□ 1.44
DDX55-203ENST00000421670 FRMPD1Q5SYB0 1578 aa24.07■■□□□ 1.44
DDX55-203ENST00000421670 KDM6BO15054 1643 aa24.07■■□□□ 1.44
DDX55-203ENST00000421670 DNMT1P26358 1616 aaKnown RBP24.07■■□□□ 1.44
DDX55-203ENST00000421670 ARHGEF5Q12774 1597 aa24.06■■□□□ 1.44
DDX55-203ENST00000421670 KIAA1107Q9UPP5 1409 aa24.05■■□□□ 1.44
DDX55-203ENST00000421670 MBD5Q9P267 1494 aa24.05■■□□□ 1.44
DDX55-203ENST00000421670 HNRNPMP52272 730 aaKnown RBP eCLIP24.04■■□□□ 1.44
DDX55-203ENST00000421670 COL17A1Q9UMD9 1497 aaPredicted RBP24.04■■□□□ 1.44
DDX55-203ENST00000421670 POGZQ7Z3K3 1410 aa24.03■■□□□ 1.44
DDX55-203ENST00000421670 TRAPPC8Q9Y2L5 1435 aa24.03■■□□□ 1.44
DDX55-203ENST00000421670 DENND4BO75064 1496 aaPredicted RBP24.02■■□□□ 1.44
DDX55-203ENST00000421670 CCDC141Q6ZP82 1450 aa24.02■■□□□ 1.44
DDX55-203ENST00000421670 ZNF518AQ6AHZ1 1483 aa24■■□□□ 1.43
DDX55-203ENST00000421670 KDM5CP41229 1560 aa24■■□□□ 1.43
DDX55-203ENST00000421670 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.99■■□□□ 1.43
DDX55-203ENST00000421670 DAPK1P53355 1430 aa23.98■■□□□ 1.43
DDX55-203ENST00000421670 RAPGEF3O95398 923 aa23.98■■□□□ 1.43
DDX55-203ENST00000421670 ABCC5O15440 1437 aa23.96■■□□□ 1.43
DDX55-203ENST00000421670 HECW2Q9P2P5 1572 aa23.96■■□□□ 1.43
DDX55-203ENST00000421670 INO80Q9ULG1 1556 aaPredicted RBP23.95■■□□□ 1.42
DDX55-203ENST00000421670 ADGBQ8N7X0 1667 aa23.95■■□□□ 1.42
DDX55-203ENST00000421670 ZMYM4Q5VZL5 1548 aa23.95■■□□□ 1.42
DDX55-203ENST00000421670 AFAP1Q8N556 730 aa23.95■■□□□ 1.42
DDX55-203ENST00000421670 KIDINS220Q9ULH0 1771 aa23.93■■□□□ 1.42
DDX55-203ENST00000421670 ZFYVE16Q7Z3T8 1539 aa23.93■■□□□ 1.42
DDX55-203ENST00000421670 ITGAEP38570 1179 aa23.93■■□□□ 1.42
DDX55-203ENST00000421670 MAST1Q9Y2H9 1570 aa23.93■■□□□ 1.42
DDX55-203ENST00000421670 SHANK2Q9UPX8 1470 aa23.92■■□□□ 1.42
DDX55-203ENST00000421670 PTPRKQ15262 1439 aa23.92■■□□□ 1.42
DDX55-203ENST00000421670 ATP7AQ04656 1500 aa23.91■■□□□ 1.42
DDX55-203ENST00000421670 C9orf84Q5VXU9 1444 aa23.9■■□□□ 1.42
DDX55-203ENST00000421670 AEBP2Q6ZN18 517 aaPredicted RBP23.9■■□□□ 1.42
DDX55-203ENST00000421670 ABCA6Q8N139 1617 aa23.88■■□□□ 1.41
DDX55-203ENST00000421670 RSPH4AQ5TD94 716 aa23.88■■□□□ 1.41
DDX55-203ENST00000421670 SPAG9O60271 1321 aaKnown RBP23.87■■□□□ 1.41
DDX55-203ENST00000421670 MLH3Q9UHC1 1453 aa23.86■■□□□ 1.41
DDX55-203ENST00000421670 PLXNC1O60486 1568 aa23.85■■□□□ 1.41
DDX55-203ENST00000421670 CHIC2Q9UKJ5 165 aa23.85■■□□□ 1.41
DDX55-203ENST00000421670 ARHGEF40Q8TER5 1519 aa23.84■■□□□ 1.41
DDX55-203ENST00000421670 TSPY4P0CV99 314 aa23.84■■□□□ 1.41
DDX55-203ENST00000421670 TSPY10P0CW01 314 aa23.84■■□□□ 1.41
DDX55-203ENST00000421670 TRIM26Q12899 539 aaPredicted RBP23.84■■□□□ 1.41
DDX55-203ENST00000421670 DIP2CQ9Y2E4 1556 aa23.83■■□□□ 1.41
DDX55-203ENST00000421670 YEATS2Q9ULM3 1422 aa23.83■■□□□ 1.41
DDX55-203ENST00000421670 MYT1LQ9UL68 1186 aa23.82■■□□□ 1.4
DDX55-203ENST00000421670 ADGRL2O95490 1459 aa23.82■■□□□ 1.4
DDX55-203ENST00000421670 RTEL1-TNFRSF6BF6WH68 1400 aa23.82■■□□□ 1.4
DDX55-203ENST00000421670 MAGI2Q86UL8 1455 aa23.81■■□□□ 1.4
DDX55-203ENST00000421670 GCC2Q8IWJ2 1684 aa23.79■■□□□ 1.4
DDX55-203ENST00000421670 NCOA1Q15788 1441 aa23.76■■□□□ 1.39
DDX55-203ENST00000421670 SIGLEC1Q9BZZ2 1709 aa23.76■■□□□ 1.39
DDX55-203ENST00000421670 ANKRD30AQ9BXX3 1397 aa23.76■■□□□ 1.39
DDX55-203ENST00000421670 ROCK1Q13464 1354 aa23.74■■□□□ 1.39
DDX55-203ENST00000421670 KIF15Q9NS87 1388 aa23.74■■□□□ 1.39
DDX55-203ENST00000421670 RRP7BPQ9NSQ0 103 aa23.73■■□□□ 1.39
DDX55-203ENST00000421670 DUOX2Q9NRD8 1548 aa23.71■■□□□ 1.39
DDX55-203ENST00000421670 ATP10AO60312 1499 aa23.7■■□□□ 1.38
DDX55-203ENST00000421670 REREQ9P2R6 1566 aa23.7■■□□□ 1.38
DDX55-203ENST00000421670 A2MP01023 1474 aa23.69■■□□□ 1.38
DDX55-203ENST00000421670 HFM1A2PYH4 1435 aa23.69■■□□□ 1.38
DDX55-203ENST00000421670 NAIPQ13075 1403 aa23.68■■□□□ 1.38
DDX55-203ENST00000421670 EIF2AK4Q9P2K8 1649 aaKnown RBP23.66■■□□□ 1.38
DDX55-203ENST00000421670 PCGF6Q9BYE7 350 aa23.65■■□□□ 1.38
DDX55-203ENST00000421670 BCORL1Q5H9F3 1711 aa23.63■■□□□ 1.37
DDX55-203ENST00000421670 ERBINQ96RT1 1412 aa23.63■■□□□ 1.37
DDX55-203ENST00000421670 DHX29Q7Z478 1369 aaKnown RBP23.63■■□□□ 1.37
DDX55-203ENST00000421670 ANKRD50Q9ULJ7 1429 aa23.63■■□□□ 1.37
DDX55-203ENST00000421670 DEPDC5O75140 1603 aa23.58■■□□□ 1.37
DDX55-203ENST00000421670 RNF17Q9BXT8 1623 aaKnown RBP23.58■■□□□ 1.37
DDX55-203ENST00000421670 AGLP35573 1532 aa23.58■■□□□ 1.37
DDX55-203ENST00000421670 SETD5Q9C0A6 1442 aa23.58■■□□□ 1.36
DDX55-203ENST00000421670 UNC13BO14795 1591 aa23.55■■□□□ 1.36
DDX55-203ENST00000421670 MROH1Q8NDA8 1641 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms