RNA–Protein interactions for RNA: ENST00000421431.1

UBL4A-204, Transcript of ubiquitin like 4A, humanhuman

TSL 5

Gene UBL4A, Length 1,652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-204ENST00000421431 ITSN2Q9NZM3 1697 aa24.17■■□□□ 1.46
UBL4A-204ENST00000421431 GLI2P10070 1586 aa24.16■■□□□ 1.46
UBL4A-204ENST00000421431 KCNH8Q96L42 1107 aa24.16■■□□□ 1.46
UBL4A-204ENST00000421431 CDC42BPAQ5VT25 1732 aa24.15■■□□□ 1.46
UBL4A-204ENST00000421431 CFDP1Q9UEE9 299 aaPredicted RBP24.11■■□□□ 1.45
UBL4A-204ENST00000421431 ITGAEP38570 1179 aa24.1■■□□□ 1.45
UBL4A-204ENST00000421431 PREX2Q70Z35 1606 aa24.1■■□□□ 1.45
UBL4A-204ENST00000421431 MAP3K4Q9Y6R4 1608 aa24.1■■□□□ 1.45
UBL4A-204ENST00000421431 ZNF644Q9H582 1327 aaPredicted RBP24.1■■□□□ 1.45
UBL4A-204ENST00000421431 CAMSAP2Q08AD1 1489 aa24.08■■□□□ 1.44
UBL4A-204ENST00000421431 CDC42BPBQ9Y5S2 1711 aa24.06■■□□□ 1.44
UBL4A-204ENST00000421431 PTPRKQ15262 1439 aa24.06■■□□□ 1.44
UBL4A-204ENST00000421431 KDM4FA0A1W2PPD8 638 aa24.05■■□□□ 1.44
UBL4A-204ENST00000421431 ABCA9Q8IUA7 1624 aa24.05■■□□□ 1.44
UBL4A-204ENST00000421431 COL17A1Q9UMD9 1497 aaPredicted RBP24.04■■□□□ 1.44
UBL4A-204ENST00000421431 MYO5CQ9NQX4 1742 aa24.04■■□□□ 1.44
UBL4A-204ENST00000421431 PLCH2O75038 1416 aa24.03■■□□□ 1.44
UBL4A-204ENST00000421431 ZNF777Q9ULD5 760 aaPredicted RBP24.02■■□□□ 1.44
UBL4A-204ENST00000421431 ARHGAP5Q13017 1502 aa24.01■■□□□ 1.43
UBL4A-204ENST00000421431 SAMD9LQ8IVG5 1584 aa24■■□□□ 1.43
UBL4A-204ENST00000421431 DNMT1P26358 1616 aaKnown RBP23.99■■□□□ 1.43
UBL4A-204ENST00000421431 ABCC5O15440 1437 aa23.98■■□□□ 1.43
UBL4A-204ENST00000421431 DAPK1P53355 1430 aa23.98■■□□□ 1.43
UBL4A-204ENST00000421431 ARAP3Q8WWN8 1544 aa23.98■■□□□ 1.43
UBL4A-204ENST00000421431 MBD5Q9P267 1494 aa23.93■■□□□ 1.42
UBL4A-204ENST00000421431 TEX14Q8IWB6 1497 aa23.9■■□□□ 1.42
UBL4A-204ENST00000421431 EFCAB2Q5VUJ9 269 aa23.9■■□□□ 1.42
UBL4A-204ENST00000421431 SYCP2Q9BX26 1530 aa23.9■■□□□ 1.42
UBL4A-204ENST00000421431 ARHGEF5Q12774 1597 aa23.9■■□□□ 1.42
UBL4A-204ENST00000421431 KIAA1107Q9UPP5 1409 aa23.89■■□□□ 1.41
UBL4A-204ENST00000421431 CROCC2H7BZ55 1655 aa23.88■■□□□ 1.41
UBL4A-204ENST00000421431 HNRNPMP52272 730 aaKnown RBP eCLIP23.88■■□□□ 1.41
UBL4A-204ENST00000421431 CHIC2Q9UKJ5 165 aa23.88■■□□□ 1.41
UBL4A-204ENST00000421431 HFM1A2PYH4 1435 aa23.88■■□□□ 1.41
UBL4A-204ENST00000421431 CD109Q6YHK3 1445 aa23.88■■□□□ 1.41
UBL4A-204ENST00000421431 SETD5Q9C0A6 1442 aa23.88■■□□□ 1.41
UBL4A-204ENST00000421431 ARHGEF12Q9NZN5 1544 aa23.88■■□□□ 1.41
UBL4A-204ENST00000421431 ABCC1P33527 1531 aa23.87■■□□□ 1.41
UBL4A-204ENST00000421431 FANCAO15360 1455 aa23.87■■□□□ 1.41
UBL4A-204ENST00000421431 PLEKHH2Q8IVE3 1493 aa23.87■■□□□ 1.41
UBL4A-204ENST00000421431 AKNAQ7Z591 1439 aa23.87■■□□□ 1.41
UBL4A-204ENST00000421431 ADGRL1O94910 1474 aa23.87■■□□□ 1.41
UBL4A-204ENST00000421431 RAB3GAP2Q9H2M9 1393 aa23.86■■□□□ 1.41
UBL4A-204ENST00000421431 NAIPQ13075 1403 aa23.84■■□□□ 1.41
UBL4A-204ENST00000421431 CCDC141Q6ZP82 1450 aa23.84■■□□□ 1.41
UBL4A-204ENST00000421431 SHANK2Q9UPX8 1470 aa23.84■■□□□ 1.41
UBL4A-204ENST00000421431 ROCK1Q13464 1354 aa23.84■■□□□ 1.41
UBL4A-204ENST00000421431 ADGRL2O95490 1459 aa23.82■■□□□ 1.4
UBL4A-204ENST00000421431 RRP7BPQ9NSQ0 103 aa23.81■■□□□ 1.4
UBL4A-204ENST00000421431 C9orf84Q5VXU9 1444 aa23.8■■□□□ 1.4
UBL4A-204ENST00000421431 RSPH4AQ5TD94 716 aa23.79■■□□□ 1.4
UBL4A-204ENST00000421431 GCC2Q8IWJ2 1684 aa23.79■■□□□ 1.4
UBL4A-204ENST00000421431 NCOA1Q15788 1441 aa23.78■■□□□ 1.4
UBL4A-204ENST00000421431 TRAPPC8Q9Y2L5 1435 aa23.78■■□□□ 1.4
UBL4A-204ENST00000421431 ADGBQ8N7X0 1667 aa23.77■■□□□ 1.4
UBL4A-204ENST00000421431 CFAP74Q9C0B2 1584 aa23.75■■□□□ 1.39
UBL4A-204ENST00000421431 MAST1Q9Y2H9 1570 aa23.75■■□□□ 1.39
UBL4A-204ENST00000421431 TSPY4P0CV99 314 aa23.74■■□□□ 1.39
UBL4A-204ENST00000421431 TSPY10P0CW01 314 aa23.74■■□□□ 1.39
UBL4A-204ENST00000421431 HRCP23327 699 aa23.74■■□□□ 1.39
UBL4A-204ENST00000421431 ANKRD30AQ9BXX3 1397 aa23.73■■□□□ 1.39
UBL4A-204ENST00000421431 SCAPERQ9BY12 1400 aa23.73■■□□□ 1.39
UBL4A-204ENST00000421431 NEO1Q92859 1461 aa23.72■■□□□ 1.39
UBL4A-204ENST00000421431 CCER1Q8TC90 406 aaPredicted RBP23.72■■□□□ 1.39
UBL4A-204ENST00000421431 DHX57Q6P158 1386 aaKnown RBP23.7■■□□□ 1.38
UBL4A-204ENST00000421431 AFAP1Q8N556 730 aa23.68■■□□□ 1.38
UBL4A-204ENST00000421431 PLXNC1O60486 1568 aa23.65■■□□□ 1.38
UBL4A-204ENST00000421431 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
UBL4A-204ENST00000421431 ZFYVE16Q7Z3T8 1539 aa23.64■■□□□ 1.37
UBL4A-204ENST00000421431 POGZQ7Z3K3 1410 aa23.63■■□□□ 1.37
UBL4A-204ENST00000421431 RTEL1-TNFRSF6BF6WH68 1400 aa23.63■■□□□ 1.37
UBL4A-204ENST00000421431 ZNF518AQ6AHZ1 1483 aa23.62■■□□□ 1.37
UBL4A-204ENST00000421431 INO80Q9ULG1 1556 aaPredicted RBP23.62■■□□□ 1.37
UBL4A-204ENST00000421431 SPAG9O60271 1321 aaKnown RBP23.61■■□□□ 1.37
UBL4A-204ENST00000421431 ANKRD50Q9ULJ7 1429 aa23.61■■□□□ 1.37
UBL4A-204ENST00000421431 KDM5CP41229 1560 aa23.6■■□□□ 1.37
UBL4A-204ENST00000421431 ATP7AQ04656 1500 aa23.59■■□□□ 1.37
UBL4A-204ENST00000421431 DENND4BO75064 1496 aaPredicted RBP23.58■■□□□ 1.37
UBL4A-204ENST00000421431 HECW2Q9P2P5 1572 aa23.58■■□□□ 1.36
UBL4A-204ENST00000421431 FRMPD1Q5SYB0 1578 aa23.56■■□□□ 1.36
UBL4A-204ENST00000421431 RAPGEF3O95398 923 aa23.54■■□□□ 1.36
UBL4A-204ENST00000421431 DUOX2Q9NRD8 1548 aa23.54■■□□□ 1.36
UBL4A-204ENST00000421431 RICTORQ6R327 1708 aa23.53■■□□□ 1.36
UBL4A-204ENST00000421431 KIDINS220Q9ULH0 1771 aa23.53■■□□□ 1.36
UBL4A-204ENST00000421431 MLH3Q9UHC1 1453 aa23.52■■□□□ 1.36
UBL4A-204ENST00000421431 CLSPNQ9HAW4 1339 aa23.51■■□□□ 1.35
UBL4A-204ENST00000421431 TRIM52Q96A61 297 aa23.5■■□□□ 1.35
UBL4A-204ENST00000421431 ERBINQ96RT1 1412 aa23.5■■□□□ 1.35
UBL4A-204ENST00000421431 ACIN1Q9UKV3 1341 aaKnown RBP23.49■■□□□ 1.35
UBL4A-204ENST00000421431 ZEB1P37275 1124 aaPredicted RBP23.48■■□□□ 1.35
UBL4A-204ENST00000421431 PZPP20742 1482 aa23.46■■□□□ 1.35
UBL4A-204ENST00000421431 ZMYM4Q5VZL5 1548 aa23.45■■□□□ 1.34
UBL4A-204ENST00000421431 MYT1LQ9UL68 1186 aa23.44■■□□□ 1.34
UBL4A-204ENST00000421431 KDM5DQ9BY66 1539 aa23.44■■□□□ 1.34
UBL4A-204ENST00000421431 ADAMTSL3P82987 1691 aa23.44■■□□□ 1.34
UBL4A-204ENST00000421431 ABCA6Q8N139 1617 aa23.43■■□□□ 1.34
UBL4A-204ENST00000421431 MPHOSPH9Q99550 1183 aa23.43■■□□□ 1.34
UBL4A-204ENST00000421431 UNC13BO14795 1591 aa23.42■■□□□ 1.34
UBL4A-204ENST00000421431 DHX29Q7Z478 1369 aaKnown RBP23.42■■□□□ 1.34
UBL4A-204ENST00000421431 MAGI2Q86UL8 1455 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 428.4 ms