RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 PCGF6Q9BYE7 350 aa32.72■■■□□ 2.83
ABCF3-202ENST00000421340 EFCAB2Q5VUJ9 269 aa32.71■■■□□ 2.83
ABCF3-202ENST00000421340 MYO5CQ9NQX4 1742 aa32.7■■■□□ 2.83
ABCF3-202ENST00000421340 CD109Q6YHK3 1445 aa32.69■■■□□ 2.82
ABCF3-202ENST00000421340 FAM69CQ0P6D2 419 aa32.68■■■□□ 2.82
ABCF3-202ENST00000421340 DIP2BQ9P265 1576 aa32.67■■■□□ 2.82
ABCF3-202ENST00000421340 ARHGAP5Q13017 1502 aa32.67■■■□□ 2.82
ABCF3-202ENST00000421340 CDC42BPBQ9Y5S2 1711 aa32.66■■■□□ 2.82
ABCF3-202ENST00000421340 ZNF644Q9H582 1327 aaPredicted RBP32.64■■■□□ 2.82
ABCF3-202ENST00000421340 ZNF777Q9ULD5 760 aaPredicted RBP32.64■■■□□ 2.82
ABCF3-202ENST00000421340 CAMSAP2Q08AD1 1489 aa32.63■■■□□ 2.81
ABCF3-202ENST00000421340 PLEKHH2Q8IVE3 1493 aa32.61■■■□□ 2.81
ABCF3-202ENST00000421340 KIAA1107Q9UPP5 1409 aa32.6■■■□□ 2.81
ABCF3-202ENST00000421340 RSPH4AQ5TD94 716 aa32.6■■■□□ 2.81
ABCF3-202ENST00000421340 MAP3K4Q9Y6R4 1608 aa32.59■■■□□ 2.81
ABCF3-202ENST00000421340 FANCAO15360 1455 aa32.57■■■□□ 2.8
ABCF3-202ENST00000421340 SAMD9LQ8IVG5 1584 aa32.55■■■□□ 2.8
ABCF3-202ENST00000421340 NEO1Q92859 1461 aa32.51■■■□□ 2.79
ABCF3-202ENST00000421340 MBD5Q9P267 1494 aa32.51■■■□□ 2.79
ABCF3-202ENST00000421340 CFAP74Q9C0B2 1584 aa32.49■■■□□ 2.79
ABCF3-202ENST00000421340 ABCC5O15440 1437 aa32.49■■■□□ 2.79
ABCF3-202ENST00000421340 DAPK1P53355 1430 aa32.49■■■□□ 2.79
ABCF3-202ENST00000421340 AKNAQ7Z591 1439 aa32.49■■■□□ 2.79
ABCF3-202ENST00000421340 ARHGEF5Q12774 1597 aa32.49■■■□□ 2.79
ABCF3-202ENST00000421340 ITGAEP38570 1179 aa32.48■■■□□ 2.79
ABCF3-202ENST00000421340 HNRNPMP52272 730 aaKnown RBP eCLIP32.48■■■□□ 2.79
ABCF3-202ENST00000421340 DNMT1P26358 1616 aaKnown RBP32.47■■■□□ 2.79
ABCF3-202ENST00000421340 ABCC1P33527 1531 aa32.45■■■□□ 2.78
ABCF3-202ENST00000421340 KIF13AQ9H1H9 1805 aa32.44■■■□□ 2.78
ABCF3-202ENST00000421340 PTPRKQ15262 1439 aa32.44■■■□□ 2.78
ABCF3-202ENST00000421340 TEX14Q8IWB6 1497 aa32.44■■■□□ 2.78
ABCF3-202ENST00000421340 ADGRL1O94910 1474 aa32.42■■■□□ 2.78
ABCF3-202ENST00000421340 ARHGEF12Q9NZN5 1544 aa32.41■■■□□ 2.78
ABCF3-202ENST00000421340 CCDC141Q6ZP82 1450 aa32.41■■■□□ 2.78
ABCF3-202ENST00000421340 SYCP2Q9BX26 1530 aa32.41■■■□□ 2.78
ABCF3-202ENST00000421340 TSPY4P0CV99 314 aa32.4■■■□□ 2.78
ABCF3-202ENST00000421340 TSPY10P0CW01 314 aa32.4■■■□□ 2.78
ABCF3-202ENST00000421340 SCAPERQ9BY12 1400 aa32.39■■■□□ 2.78
ABCF3-202ENST00000421340 SHANK2Q9UPX8 1470 aa32.39■■■□□ 2.78
ABCF3-202ENST00000421340 ROCK1Q13464 1354 aa32.38■■■□□ 2.77
ABCF3-202ENST00000421340 TRAPPC8Q9Y2L5 1435 aa32.34■■■□□ 2.77
ABCF3-202ENST00000421340 PPRC1Q5VV67 1664 aaKnown RBP32.34■■■□□ 2.77
ABCF3-202ENST00000421340 TRHP20396 242 aaPredicted RBP32.32■■■□□ 2.76
ABCF3-202ENST00000421340 ADGRL2O95490 1459 aa32.3■■■□□ 2.76
ABCF3-202ENST00000421340 C9orf84Q5VXU9 1444 aa32.3■■■□□ 2.76
ABCF3-202ENST00000421340 CHIC2Q9UKJ5 165 aa32.3■■■□□ 2.76
ABCF3-202ENST00000421340 CROCC2H7BZ55 1655 aa32.29■■■□□ 2.76
ABCF3-202ENST00000421340 MAST1Q9Y2H9 1570 aa32.28■■■□□ 2.76
ABCF3-202ENST00000421340 HFM1A2PYH4 1435 aa32.28■■■□□ 2.76
ABCF3-202ENST00000421340 AFAP1Q8N556 730 aa32.28■■■□□ 2.76
ABCF3-202ENST00000421340 ANKRD30AQ9BXX3 1397 aa32.28■■■□□ 2.76
ABCF3-202ENST00000421340 RTEL1-TNFRSF6BF6WH68 1400 aa32.27■■■□□ 2.76
ABCF3-202ENST00000421340 NCOA1Q15788 1441 aa32.27■■■□□ 2.76
ABCF3-202ENST00000421340 DENND4BO75064 1496 aaPredicted RBP32.27■■■□□ 2.76
ABCF3-202ENST00000421340 ZNF518AQ6AHZ1 1483 aa32.27■■■□□ 2.76
ABCF3-202ENST00000421340 POGZQ7Z3K3 1410 aa32.26■■■□□ 2.75
ABCF3-202ENST00000421340 HRCP23327 699 aa32.25■■■□□ 2.75
ABCF3-202ENST00000421340 SETD5Q9C0A6 1442 aa32.25■■■□□ 2.75
ABCF3-202ENST00000421340 SPAG9O60271 1321 aaKnown RBP32.24■■■□□ 2.75
ABCF3-202ENST00000421340 NAIPQ13075 1403 aa32.22■■■□□ 2.75
ABCF3-202ENST00000421340 TSPOAP1O95153 1857 aa32.22■■■□□ 2.75
ABCF3-202ENST00000421340 RRP7BPQ9NSQ0 103 aa32.2■■■□□ 2.75
ABCF3-202ENST00000421340 KDM5CP41229 1560 aa32.18■■■□□ 2.74
ABCF3-202ENST00000421340 ADGBQ8N7X0 1667 aa32.18■■■□□ 2.74
ABCF3-202ENST00000421340 ACIN1Q9UKV3 1341 aaKnown RBP32.16■■■□□ 2.74
ABCF3-202ENST00000421340 MLH3Q9UHC1 1453 aa32.16■■■□□ 2.74
ABCF3-202ENST00000421340 RAPGEF3O95398 923 aa32.14■■■□□ 2.74
ABCF3-202ENST00000421340 PLXNC1O60486 1568 aa32.12■■■□□ 2.73
ABCF3-202ENST00000421340 RAB3GAP2Q9H2M9 1393 aa32.12■■■□□ 2.73
ABCF3-202ENST00000421340 KIF15Q9NS87 1388 aa32.11■■■□□ 2.73
ABCF3-202ENST00000421340 ZFYVE16Q7Z3T8 1539 aa32.1■■■□□ 2.73
ABCF3-202ENST00000421340 INO80Q9ULG1 1556 aaPredicted RBP32.1■■■□□ 2.73
ABCF3-202ENST00000421340 ATP7AQ04656 1500 aa32.1■■■□□ 2.73
ABCF3-202ENST00000421340 RICTORQ6R327 1708 aa32.09■■■□□ 2.73
ABCF3-202ENST00000421340 GCC2Q8IWJ2 1684 aa32.08■■■□□ 2.73
ABCF3-202ENST00000421340 MAGI2Q86UL8 1455 aa32.06■■■□□ 2.72
ABCF3-202ENST00000421340 COL17A1Q9UMD9 1497 aaPredicted RBP32.05■■■□□ 2.72
ABCF3-202ENST00000421340 ZMYM4Q5VZL5 1548 aa32.05■■■□□ 2.72
ABCF3-202ENST00000421340 FRMPD1Q5SYB0 1578 aa32.04■■■□□ 2.72
ABCF3-202ENST00000421340 ANKRD50Q9ULJ7 1429 aa32.04■■■□□ 2.72
ABCF3-202ENST00000421340 HECW2Q9P2P5 1572 aa32.03■■■□□ 2.72
ABCF3-202ENST00000421340 MYT1LQ9UL68 1186 aa32.03■■■□□ 2.72
ABCF3-202ENST00000421340 DUOX2Q9NRD8 1548 aa32.03■■■□□ 2.72
ABCF3-202ENST00000421340 KIDINS220Q9ULH0 1771 aa32■■■□□ 2.71
ABCF3-202ENST00000421340 ERBINQ96RT1 1412 aa31.98■■■□□ 2.71
ABCF3-202ENST00000421340 DHX29Q7Z478 1369 aaKnown RBP31.97■■■□□ 2.71
ABCF3-202ENST00000421340 KDM6BO15054 1643 aa31.91■■■□□ 2.7
ABCF3-202ENST00000421340 A2MP01023 1474 aa31.9■■■□□ 2.7
ABCF3-202ENST00000421340 YEATS2Q9ULM3 1422 aa31.88■■■□□ 2.69
ABCF3-202ENST00000421340 DIP2CQ9Y2E4 1556 aa31.86■■■□□ 2.69
ABCF3-202ENST00000421340 ABCA6Q8N139 1617 aa31.86■■■□□ 2.69
ABCF3-202ENST00000421340 ATP10AO60312 1499 aa31.85■■■□□ 2.69
ABCF3-202ENST00000421340 TRIM52Q96A61 297 aa31.82■■■□□ 2.68
ABCF3-202ENST00000421340 DHX57Q6P158 1386 aaKnown RBP31.81■■■□□ 2.68
ABCF3-202ENST00000421340 EIF2AK4Q9P2K8 1649 aaKnown RBP31.81■■■□□ 2.68
ABCF3-202ENST00000421340 REREQ9P2R6 1566 aa31.8■■■□□ 2.68
ABCF3-202ENST00000421340 CCER1Q8TC90 406 aaPredicted RBP31.77■■■□□ 2.68
ABCF3-202ENST00000421340 KIF3BO15066 747 aa31.76■■■□□ 2.67
ABCF3-202ENST00000421340 ARHGEF40Q8TER5 1519 aa31.75■■■□□ 2.67
ABCF3-202ENST00000421340 KDM5DQ9BY66 1539 aa31.75■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms