RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 CRISPLD2Q9H0B8 497 aa6.34□□□□□ -1.39
VPS41-206ENST00000418457 P3H3Q8IVL6 736 aa6.32□□□□□ -1.4
VPS41-206ENST00000418457 TMC2Q8TDI7 906 aa6.32□□□□□ -1.4
VPS41-206ENST00000418457 DDX27Q96GQ7 796 aaKnown RBP6.32□□□□□ -1.4
VPS41-206ENST00000418457 GPHNQ9NQX3 736 aaPredicted RBP6.32□□□□□ -1.4
VPS41-206ENST00000418457 MFSD10Q14728 455 aa6.31□□□□□ -1.4
VPS41-206ENST00000418457 C3orf67Q6ZVT6 689 aa6.31□□□□□ -1.4
VPS41-206ENST00000418457 BCANQ96GW7 911 aa6.31□□□□□ -1.4
VPS41-206ENST00000418457 E2F4Q16254 413 aa6.29□□□□□ -1.4
VPS41-206ENST00000418457 PPP1R15BQ5SWA1 713 aa6.29□□□□□ -1.4
VPS41-206ENST00000418457 C2orf72A6NCS6 295 aa6.28□□□□□ -1.4
VPS41-206ENST00000418457 KCNV2Q8TDN2 545 aa6.28□□□□□ -1.4
VPS41-206ENST00000418457 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.28□□□□□ -1.4
VPS41-206ENST00000418457 KIF3CO14782 793 aa6.27□□□□□ -1.41
VPS41-206ENST00000418457 FOXK1P85037 733 aa6.27□□□□□ -1.41
VPS41-206ENST00000418457 DSG2Q14126 1118 aa6.27□□□□□ -1.41
VPS41-206ENST00000418457 NBR1Q14596 966 aa6.27□□□□□ -1.41
VPS41-206ENST00000418457 TMEM92Q6UXU6 159 aa6.27□□□□□ -1.41
VPS41-206ENST00000418457 CAMK2BQ13554 666 aa6.25□□□□□ -1.41
VPS41-206ENST00000418457 PLPP6Q8IY26 295 aa6.25□□□□□ -1.41
VPS41-206ENST00000418457 POTEB2H3BUK9 544 aa6.24□□□□□ -1.41
VPS41-206ENST00000418457 ARHGEF1Q92888 912 aaKnown RBP6.24□□□□□ -1.41
VPS41-206ENST00000418457 POTEJP0CG39 1038 aa6.23□□□□□ -1.41
VPS41-206ENST00000418457 SCUBE2Q9NQ36 999 aa6.23□□□□□ -1.41
VPS41-206ENST00000418457 MAMSTRQ6ZN01 415 aa6.22□□□□□ -1.41
VPS41-206ENST00000418457 ARIH1Q9Y4X5 557 aaPredicted RBP6.21□□□□□ -1.42
VPS41-206ENST00000418457 EMILIN3Q9NT22 766 aa6.2□□□□□ -1.42
VPS41-206ENST00000418457 SLAIN1Q8ND83 568 aa6.19□□□□□ -1.42
VPS41-206ENST00000418457 DPYSL4O14531 572 aa6.18□□□□□ -1.42
VPS41-206ENST00000418457 UPF1Q92900 1129 aaKnown RBP eCLIP6.18□□□□□ -1.42
VPS41-206ENST00000418457 MAP3K9P80192 1104 aa6.17□□□□□ -1.42
VPS41-206ENST00000418457 OXER1Q8TDS5 423 aa6.16□□□□□ -1.42
VPS41-206ENST00000418457 SPDYE16A6NNV3 312 aaPredicted RBP6.15□□□□□ -1.42
VPS41-206ENST00000418457 TBC1D12O60347 775 aa6.15□□□□□ -1.42
VPS41-206ENST00000418457 SLC34A2O95436 690 aa6.15□□□□□ -1.42
VPS41-206ENST00000418457 PDIA6Q15084 440 aa6.15□□□□□ -1.42
VPS41-206ENST00000418457 LHX8Q68G74 356 aa6.15□□□□□ -1.42
VPS41-206ENST00000418457 PTCD2Q8WV60 388 aaKnown RBP6.15□□□□□ -1.42
VPS41-206ENST00000418457 SEMA3EO15041 775 aa6.14□□□□□ -1.43
VPS41-206ENST00000418457 TESPA1A2RU30 521 aaPredicted RBP6.13□□□□□ -1.43
VPS41-206ENST00000418457 TULP1O00294 542 aaPredicted RBP6.13□□□□□ -1.43
VPS41-206ENST00000418457 DOK7Q18PE1 504 aa6.13□□□□□ -1.43
VPS41-206ENST00000418457 SMYD5Q6GMV2 418 aa6.12□□□□□ -1.43
VPS41-206ENST00000418457 OTUD5Q96G74 571 aa6.12□□□□□ -1.43
VPS41-206ENST00000418457 ZNF316A6NFI3 1004 aaPredicted RBP6.11□□□□□ -1.43
VPS41-206ENST00000418457 RIMBP2O15034 1052 aa6.11□□□□□ -1.43
VPS41-206ENST00000418457 SNPHO15079 494 aa6.11□□□□□ -1.43
VPS41-206ENST00000418457 PCDHGA4Q9Y5G9 962 aa6.11□□□□□ -1.43
VPS41-206ENST00000418457 EVI5O60447 810 aa6.1□□□□□ -1.43
VPS41-206ENST00000418457 HOXB3P14651 431 aaPredicted RBP6.1□□□□□ -1.43
VPS41-206ENST00000418457 ZNF710Q8N1W2 664 aa6.1□□□□□ -1.43
VPS41-206ENST00000418457 MLLT3P42568 568 aaPredicted RBP6.09□□□□□ -1.43
VPS41-206ENST00000418457 LMOD2Q6P5Q4 547 aa6.09□□□□□ -1.43
VPS41-206ENST00000418457 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.09□□□□□ -1.43
VPS41-206ENST00000418457 TPRNQ4KMQ1 711 aa6.08□□□□□ -1.44
VPS41-206ENST00000418457 ZSWIM6Q9HCJ5 1215 aa6.08□□□□□ -1.44
VPS41-206ENST00000418457 GRXCR2A6NFK2 248 aa6.07□□□□□ -1.44
VPS41-206ENST00000418457 PTGER2P43116 358 aa6.07□□□□□ -1.44
VPS41-206ENST00000418457 ANO8Q9HCE9 1232 aaPredicted RBP6.07□□□□□ -1.44
VPS41-206ENST00000418457 ARSIQ5FYB1 569 aa6.06□□□□□ -1.44
VPS41-206ENST00000418457 DDX12PQ92771 950 aa6.06□□□□□ -1.44
VPS41-206ENST00000418457 NUDT7P0C024 238 aa6.05□□□□□ -1.44
VPS41-206ENST00000418457 GPR153Q6NV75 609 aa6.05□□□□□ -1.44
VPS41-206ENST00000418457 KHSRPQ92945 711 aaKnown RBP eCLIP6.05□□□□□ -1.449e-7■■■□□ 16.8
VPS41-206ENST00000418457 KDM4FA0A1W2PPD8 638 aa6.04□□□□□ -1.44
VPS41-206ENST00000418457 PRKCSHP14314 528 aaPredicted RBP6.03□□□□□ -1.44
VPS41-206ENST00000418457 RBM26Q5T8P6 1007 aaKnown RBP6.03□□□□□ -1.44
VPS41-206ENST00000418457 PHF14O94880 888 aa6.02□□□□□ -1.45
VPS41-206ENST00000418457 HOXB1P14653 301 aaPredicted RBP6.02□□□□□ -1.45
VPS41-206ENST00000418457 OSBPP22059 807 aa6.02□□□□□ -1.45
VPS41-206ENST00000418457 EPAS1Q99814 870 aa6.02□□□□□ -1.45
VPS41-206ENST00000418457 GPIHBP1Q8IV16 184 aa6.01□□□□□ -1.45
VPS41-206ENST00000418457 JPH4Q96JJ6 628 aa6.01□□□□□ -1.45
VPS41-206ENST00000418457 TYW1BQ6NUM6 668 aa6□□□□□ -1.45
VPS41-206ENST00000418457 ZNF454Q8N9F8 522 aa6□□□□□ -1.45
VPS41-206ENST00000418457 LHX6Q9UPM6 363 aa6□□□□□ -1.45
VPS41-206ENST00000418457 PCDHGA10Q9Y5H3 936 aa6□□□□□ -1.45
VPS41-206ENST00000418457 NUTM2FA1L443 756 aa5.99□□□□□ -1.45
VPS41-206ENST00000418457 FOSBP53539 338 aa5.99□□□□□ -1.45
VPS41-206ENST00000418457 EN1Q05925 392 aaPredicted RBP5.99□□□□□ -1.45
VPS41-206ENST00000418457 ZC3H15Q8WU90 426 aaKnown RBP5.99□□□□□ -1.45
VPS41-206ENST00000418457 FBXW7Q969H0 707 aa5.99□□□□□ -1.45
VPS41-206ENST00000418457 PSDA5PKW4 1024 aaPredicted RBP5.98□□□□□ -1.45
VPS41-206ENST00000418457 MAP3K7O43318 606 aa5.98□□□□□ -1.45
VPS41-206ENST00000418457 PRIM1P49642 420 aaKnown RBP5.98□□□□□ -1.45
VPS41-206ENST00000418457 ZDHHC16Q969W1 377 aa5.98□□□□□ -1.45
VPS41-206ENST00000418457 RBM33Q96EV2 1170 aaKnown RBP5.98□□□□□ -1.45
VPS41-206ENST00000418457 ST18O60284 1047 aa5.97□□□□□ -1.45
VPS41-206ENST00000418457 PPP4R3BQ5MIZ7 849 aa5.97□□□□□ -1.45
VPS41-206ENST00000418457 FAM163AQ96GL9 167 aaPredicted RBP5.96□□□□□ -1.46
VPS41-206ENST00000418457 ZMYND10O75800 440 aa5.95□□□□□ -1.46
VPS41-206ENST00000418457 FCHSD2O94868 740 aa5.95□□□□□ -1.46
VPS41-206ENST00000418457 GPR37O15354 613 aa5.94□□□□□ -1.46
VPS41-206ENST00000418457 EMP3P54852 163 aa5.94□□□□□ -1.46
VPS41-206ENST00000418457 TSR1Q2NL82 804 aaKnown RBP5.94□□□□□ -1.46
VPS41-206ENST00000418457 C6orf132Q5T0Z8 1188 aa5.94□□□□□ -1.46
VPS41-206ENST00000418457 ADAM33Q9BZ11 813 aa5.94□□□□□ -1.46
VPS41-206ENST00000418457 CDHR5Q9HBB8 845 aa5.94□□□□□ -1.46
VPS41-206ENST00000418457 ERBB3P21860 1342 aa5.94□□□□□ -1.46
VPS41-206ENST00000418457 PTGDRQ13258 359 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms