RNA–Protein interactions for RNA: ENST00000417478.6

RUFY3-203, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-203ENST00000417478 PREX2Q70Z35 1606 aa30.13■■■□□ 2.41
RUFY3-203ENST00000417478 CCER1Q8TC90 406 aaPredicted RBP30.13■■■□□ 2.41
RUFY3-203ENST00000417478 ZNF777Q9ULD5 760 aaPredicted RBP30.11■■■□□ 2.41
RUFY3-203ENST00000417478 MAPKBP1O60336 1514 aa30.1■■■□□ 2.41
RUFY3-203ENST00000417478 CAMSAP2Q08AD1 1489 aa30.07■■■□□ 2.4
RUFY3-203ENST00000417478 ABCA9Q8IUA7 1624 aa30.06■■■□□ 2.4
RUFY3-203ENST00000417478 ARHGAP5Q13017 1502 aa30.04■■■□□ 2.4
RUFY3-203ENST00000417478 PTPRKQ15262 1439 aa30.03■■■□□ 2.4
RUFY3-203ENST00000417478 PLCH2O75038 1416 aa30.01■■■□□ 2.39
RUFY3-203ENST00000417478 SAMD9LQ8IVG5 1584 aa30■■■□□ 2.39
RUFY3-203ENST00000417478 DNAJC5Q9H3Z4 198 aa29.99■■■□□ 2.39
RUFY3-203ENST00000417478 DNMT1P26358 1616 aaKnown RBP29.96■■■□□ 2.39
RUFY3-203ENST00000417478 ABCC5O15440 1437 aa29.93■■■□□ 2.38
RUFY3-203ENST00000417478 DAPK1P53355 1430 aa29.93■■■□□ 2.38
RUFY3-203ENST00000417478 CHIC2Q9UKJ5 165 aa29.91■■■□□ 2.38
RUFY3-203ENST00000417478 HNRNPMP52272 730 aaKnown RBP eCLIP29.9■■■□□ 2.38
RUFY3-203ENST00000417478 ARAP3Q8WWN8 1544 aa29.9■■■□□ 2.38
RUFY3-203ENST00000417478 EFCAB2Q5VUJ9 269 aa29.9■■■□□ 2.38
RUFY3-203ENST00000417478 CD109Q6YHK3 1445 aa29.88■■■□□ 2.37
RUFY3-203ENST00000417478 SYCP2Q9BX26 1530 aa29.87■■■□□ 2.37
RUFY3-203ENST00000417478 DIP2BQ9P265 1576 aa29.87■■■□□ 2.37
RUFY3-203ENST00000417478 CROCC2H7BZ55 1655 aa29.86■■■□□ 2.37
RUFY3-203ENST00000417478 MBD5Q9P267 1494 aa29.86■■■□□ 2.37
RUFY3-203ENST00000417478 FANCAO15360 1455 aa29.85■■■□□ 2.37
RUFY3-203ENST00000417478 GLI2P10070 1586 aa29.83■■■□□ 2.37
RUFY3-203ENST00000417478 ARHGEF12Q9NZN5 1544 aa29.83■■■□□ 2.37
RUFY3-203ENST00000417478 MAP3K4Q9Y6R4 1608 aa29.83■■■□□ 2.37
RUFY3-203ENST00000417478 FAM69CQ0P6D2 419 aa29.83■■■□□ 2.37
RUFY3-203ENST00000417478 ARHGEF5Q12774 1597 aa29.82■■■□□ 2.36
RUFY3-203ENST00000417478 ABCC1P33527 1531 aa29.81■■■□□ 2.36
RUFY3-203ENST00000417478 PLEKHH2Q8IVE3 1493 aa29.8■■■□□ 2.36
RUFY3-203ENST00000417478 RRP7BPQ9NSQ0 103 aa29.8■■■□□ 2.36
RUFY3-203ENST00000417478 SETD5Q9C0A6 1442 aa29.79■■■□□ 2.36
RUFY3-203ENST00000417478 KIAA1107Q9UPP5 1409 aa29.79■■■□□ 2.36
RUFY3-203ENST00000417478 AKNAQ7Z591 1439 aa29.78■■■□□ 2.36
RUFY3-203ENST00000417478 KIF13AQ9H1H9 1805 aa29.77■■■□□ 2.36
RUFY3-203ENST00000417478 RAB3GAP2Q9H2M9 1393 aa29.77■■■□□ 2.36
RUFY3-203ENST00000417478 CCDC141Q6ZP82 1450 aa29.77■■■□□ 2.36
RUFY3-203ENST00000417478 HFM1A2PYH4 1435 aa29.76■■■□□ 2.36
RUFY3-203ENST00000417478 NAIPQ13075 1403 aa29.75■■■□□ 2.35
RUFY3-203ENST00000417478 ADGBQ8N7X0 1667 aa29.75■■■□□ 2.35
RUFY3-203ENST00000417478 TSPOAP1O95153 1857 aa29.75■■■□□ 2.35
RUFY3-203ENST00000417478 C9orf84Q5VXU9 1444 aa29.72■■■□□ 2.35
RUFY3-203ENST00000417478 TRAPPC8Q9Y2L5 1435 aa29.72■■■□□ 2.35
RUFY3-203ENST00000417478 ADGRL1O94910 1474 aa29.72■■■□□ 2.35
RUFY3-203ENST00000417478 SHANK2Q9UPX8 1470 aa29.72■■■□□ 2.35
RUFY3-203ENST00000417478 ROCK1Q13464 1354 aa29.71■■■□□ 2.35
RUFY3-203ENST00000417478 GCC2Q8IWJ2 1684 aa29.71■■■□□ 2.35
RUFY3-203ENST00000417478 TSPY4P0CV99 314 aa29.71■■■□□ 2.35
RUFY3-203ENST00000417478 TSPY10P0CW01 314 aa29.71■■■□□ 2.35
RUFY3-203ENST00000417478 CFAP74Q9C0B2 1584 aa29.7■■■□□ 2.35
RUFY3-203ENST00000417478 RSPH4AQ5TD94 716 aa29.7■■■□□ 2.35
RUFY3-203ENST00000417478 NCOA1Q15788 1441 aa29.68■■■□□ 2.34
RUFY3-203ENST00000417478 SCAPERQ9BY12 1400 aa29.68■■■□□ 2.34
RUFY3-203ENST00000417478 ADGRL2O95490 1459 aa29.68■■■□□ 2.34
RUFY3-203ENST00000417478 PPRC1Q5VV67 1664 aaKnown RBP29.66■■■□□ 2.34
RUFY3-203ENST00000417478 KDM6BO15054 1643 aa29.66■■■□□ 2.34
RUFY3-203ENST00000417478 AFAP1Q8N556 730 aa29.66■■■□□ 2.34
RUFY3-203ENST00000417478 ANKRD30AQ9BXX3 1397 aa29.63■■■□□ 2.33
RUFY3-203ENST00000417478 NEO1Q92859 1461 aa29.62■■■□□ 2.33
RUFY3-203ENST00000417478 MAST1Q9Y2H9 1570 aa29.62■■■□□ 2.33
RUFY3-203ENST00000417478 CLSPNQ9HAW4 1339 aa29.61■■■□□ 2.33
RUFY3-203ENST00000417478 DHX57Q6P158 1386 aaKnown RBP29.59■■■□□ 2.33
RUFY3-203ENST00000417478 SPAG9O60271 1321 aaKnown RBP29.55■■■□□ 2.32
RUFY3-203ENST00000417478 KIF15Q9NS87 1388 aa29.55■■■□□ 2.32
RUFY3-203ENST00000417478 ZFYVE16Q7Z3T8 1539 aa29.53■■■□□ 2.32
RUFY3-203ENST00000417478 POGZQ7Z3K3 1410 aa29.53■■■□□ 2.32
RUFY3-203ENST00000417478 PLXNC1O60486 1568 aa29.52■■■□□ 2.32
RUFY3-203ENST00000417478 ZNF518AQ6AHZ1 1483 aa29.52■■■□□ 2.32
RUFY3-203ENST00000417478 TEX14Q8IWB6 1497 aa29.51■■■□□ 2.31
RUFY3-203ENST00000417478 INO80Q9ULG1 1556 aaPredicted RBP29.5■■■□□ 2.31
RUFY3-203ENST00000417478 RAPGEF3O95398 923 aa29.5■■■□□ 2.31
RUFY3-203ENST00000417478 ANKRD50Q9ULJ7 1429 aa29.49■■■□□ 2.31
RUFY3-203ENST00000417478 DENND4BO75064 1496 aaPredicted RBP29.48■■■□□ 2.31
RUFY3-203ENST00000417478 ATP7AQ04656 1500 aa29.48■■■□□ 2.31
RUFY3-203ENST00000417478 RICTORQ6R327 1708 aa29.47■■■□□ 2.31
RUFY3-203ENST00000417478 RTEL1-TNFRSF6BF6WH68 1400 aa29.47■■■□□ 2.31
RUFY3-203ENST00000417478 KDM5CP41229 1560 aa29.47■■■□□ 2.31
RUFY3-203ENST00000417478 KIDINS220Q9ULH0 1771 aa29.46■■■□□ 2.31
RUFY3-203ENST00000417478 MYT1LQ9UL68 1186 aa29.45■■■□□ 2.31
RUFY3-203ENST00000417478 TRHP20396 242 aaPredicted RBP29.45■■■□□ 2.3
RUFY3-203ENST00000417478 TRIM52Q96A61 297 aa29.42■■■□□ 2.3
RUFY3-203ENST00000417478 FRMPD1Q5SYB0 1578 aa29.41■■■□□ 2.3
RUFY3-203ENST00000417478 DUOX2Q9NRD8 1548 aa29.4■■■□□ 2.3
RUFY3-203ENST00000417478 HECW2Q9P2P5 1572 aa29.39■■■□□ 2.3
RUFY3-203ENST00000417478 MLH3Q9UHC1 1453 aa29.37■■■□□ 2.29
RUFY3-203ENST00000417478 COL17A1Q9UMD9 1497 aaPredicted RBP29.34■■■□□ 2.29
RUFY3-203ENST00000417478 ABCA6Q8N139 1617 aa29.31■■■□□ 2.28
RUFY3-203ENST00000417478 ERBINQ96RT1 1412 aa29.31■■■□□ 2.28
RUFY3-203ENST00000417478 MPHOSPH9Q99550 1183 aa29.28■■■□□ 2.28
RUFY3-203ENST00000417478 ZMYM4Q5VZL5 1548 aa29.27■■■□□ 2.28
RUFY3-203ENST00000417478 PZPP20742 1482 aa29.26■■■□□ 2.27
RUFY3-203ENST00000417478 YEATS2Q9ULM3 1422 aa29.26■■■□□ 2.27
RUFY3-203ENST00000417478 NUP155O75694 1391 aa29.25■■■□□ 2.27
RUFY3-203ENST00000417478 DHX29Q7Z478 1369 aaKnown RBP29.25■■■□□ 2.27
RUFY3-203ENST00000417478 DIP2CQ9Y2E4 1556 aa29.25■■■□□ 2.27
RUFY3-203ENST00000417478 UNC13BO14795 1591 aa29.24■■■□□ 2.27
RUFY3-203ENST00000417478 ACIN1Q9UKV3 1341 aaKnown RBP29.24■■■□□ 2.27
RUFY3-203ENST00000417478 A2MP01023 1474 aa29.24■■■□□ 2.27
RUFY3-203ENST00000417478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.22■■■□□ 2.274e-10■■□□□ 11.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms