RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 MYT1LQ9UL68 1186 aa17.41■□□□□ 0.38
TM9SF4-203ENST00000417389 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
TM9SF4-203ENST00000417389 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
TM9SF4-203ENST00000417389 EHBP1L1Q8N3D4 1523 aa17.38■□□□□ 0.37
TM9SF4-203ENST00000417389 CFDP1Q9UEE9 299 aaPredicted RBP17.37■□□□□ 0.37
TM9SF4-203ENST00000417389 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
TM9SF4-203ENST00000417389 PREX2Q70Z35 1606 aa17.36■□□□□ 0.37
TM9SF4-203ENST00000417389 ARID4BQ4LE39 1312 aaPredicted RBP17.35■□□□□ 0.37
TM9SF4-203ENST00000417389 FRMPD1Q5SYB0 1578 aa17.33■□□□□ 0.37
TM9SF4-203ENST00000417389 POGZQ7Z3K3 1410 aa17.33■□□□□ 0.36
TM9SF4-203ENST00000417389 CDC42BPBQ9Y5S2 1711 aa17.33■□□□□ 0.36
TM9SF4-203ENST00000417389 GPATCH8Q9UKJ3 1502 aaKnown RBP17.32■□□□□ 0.36
TM9SF4-203ENST00000417389 CDC42BPAQ5VT25 1732 aa17.32■□□□□ 0.36
TM9SF4-203ENST00000417389 RICTORQ6R327 1708 aa17.31■□□□□ 0.36
TM9SF4-203ENST00000417389 AFAP1Q8N556 730 aa17.31■□□□□ 0.36
TM9SF4-203ENST00000417389 KDM4FA0A1W2PPD8 638 aa17.3■□□□□ 0.36
TM9SF4-203ENST00000417389 LRRC9Q6ZRR7 1453 aa17.3■□□□□ 0.36
TM9SF4-203ENST00000417389 SUPT6HQ7KZ85 1726 aaKnown RBP17.3■□□□□ 0.36
TM9SF4-203ENST00000417389 KANK4Q5T7N3 995 aaPredicted RBP17.29■□□□□ 0.36
TM9SF4-203ENST00000417389 NCOA2Q15596 1464 aa17.29■□□□□ 0.36
TM9SF4-203ENST00000417389 ZNF518AQ6AHZ1 1483 aa17.29■□□□□ 0.36
TM9SF4-203ENST00000417389 ZFYVE16Q7Z3T8 1539 aa17.28■□□□□ 0.36
TM9SF4-203ENST00000417389 HNRNPMP52272 730 aaKnown RBP eCLIP17.27■□□□□ 0.363e-7■■■□□ 15.8
TM9SF4-203ENST00000417389 ABCC1P33527 1531 aa17.26■□□□□ 0.35
TM9SF4-203ENST00000417389 YEATS2Q9ULM3 1422 aa17.26■□□□□ 0.35
TM9SF4-203ENST00000417389 MAP3K1Q13233 1512 aa17.26■□□□□ 0.35
TM9SF4-203ENST00000417389 ZMYM4Q5VZL5 1548 aa17.26■□□□□ 0.35
TM9SF4-203ENST00000417389 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
TM9SF4-203ENST00000417389 ITSN2Q9NZM3 1697 aa17.26■□□□□ 0.35
TM9SF4-203ENST00000417389 MAGI2Q86UL8 1455 aa17.25■□□□□ 0.35
TM9SF4-203ENST00000417389 PLEKHH2Q8IVE3 1493 aa17.24■□□□□ 0.35
TM9SF4-203ENST00000417389 SAMD9LQ8IVG5 1584 aa17.24■□□□□ 0.35
TM9SF4-203ENST00000417389 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
TM9SF4-203ENST00000417389 SYCP2Q9BX26 1530 aa17.24■□□□□ 0.35
TM9SF4-203ENST00000417389 ZNF644Q9H582 1327 aaPredicted RBP17.23■□□□□ 0.35
TM9SF4-203ENST00000417389 ARHGEF12Q9NZN5 1544 aa17.23■□□□□ 0.35
TM9SF4-203ENST00000417389 MLECQ14165 292 aa17.22■□□□□ 0.35
TM9SF4-203ENST00000417389 SPAG9O60271 1321 aaKnown RBP17.21■□□□□ 0.35
TM9SF4-203ENST00000417389 HECW2Q9P2P5 1572 aa17.2■□□□□ 0.34
TM9SF4-203ENST00000417389 ATP10AO60312 1499 aa17.19■□□□□ 0.34
TM9SF4-203ENST00000417389 KIAA1107Q9UPP5 1409 aa17.19■□□□□ 0.34
TM9SF4-203ENST00000417389 KDM5CP41229 1560 aa17.19■□□□□ 0.34
TM9SF4-203ENST00000417389 C9orf84Q5VXU9 1444 aa17.18■□□□□ 0.34
TM9SF4-203ENST00000417389 PLPPR3Q6T4P5 718 aa17.16■□□□□ 0.34
TM9SF4-203ENST00000417389 CAMSAP2Q08AD1 1489 aa17.16■□□□□ 0.34
TM9SF4-203ENST00000417389 MLH3Q9UHC1 1453 aa17.16■□□□□ 0.34
TM9SF4-203ENST00000417389 MYOM3Q5VTT5 1437 aa17.14■□□□□ 0.33
TM9SF4-203ENST00000417389 DIP2CQ9Y2E4 1556 aa17.12■□□□□ 0.33
TM9SF4-203ENST00000417389 ABCA6Q8N139 1617 aa17.11■□□□□ 0.33
TM9SF4-203ENST00000417389 BCORL1Q5H9F3 1711 aa17.11■□□□□ 0.33
TM9SF4-203ENST00000417389 TSPY4P0CV99 314 aa17.11■□□□□ 0.33
TM9SF4-203ENST00000417389 TSPY10P0CW01 314 aa17.11■□□□□ 0.33
TM9SF4-203ENST00000417389 PPARGC1BQ86YN6 1023 aaKnown RBP17.11■□□□□ 0.33
TM9SF4-203ENST00000417389 CCDC141Q6ZP82 1450 aa17.11■□□□□ 0.33
TM9SF4-203ENST00000417389 ATP7AQ04656 1500 aa17.11■□□□□ 0.33
TM9SF4-203ENST00000417389 RSPH4AQ5TD94 716 aa17.1■□□□□ 0.33
TM9SF4-203ENST00000417389 ESF1Q9H501 851 aaKnown RBP17.1■□□□□ 0.33
TM9SF4-203ENST00000417389 MIA2Q96PC5 1412 aa17.1■□□□□ 0.33
TM9SF4-203ENST00000417389 MBD5Q9P267 1494 aa17.09■□□□□ 0.33
TM9SF4-203ENST00000417389 KIDINS220Q9ULH0 1771 aa17.09■□□□□ 0.33
TM9SF4-203ENST00000417389 MADDQ8WXG6 1647 aa17.08■□□□□ 0.32
TM9SF4-203ENST00000417389 SIGLEC1Q9BZZ2 1709 aa17.07■□□□□ 0.32
TM9SF4-203ENST00000417389 ADAMTSL3P82987 1691 aa17.07■□□□□ 0.32
TM9SF4-203ENST00000417389 FAM50AQ14320 339 aaKnown RBP17.06■□□□□ 0.32
TM9SF4-203ENST00000417389 INO80Q9ULG1 1556 aaPredicted RBP17.06■□□□□ 0.32
TM9SF4-203ENST00000417389 PTPRMP28827 1452 aa17.05■□□□□ 0.32
TM9SF4-203ENST00000417389 RIMS1Q86UR5 1692 aaKnown RBP17.05■□□□□ 0.32
TM9SF4-203ENST00000417389 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
TM9SF4-203ENST00000417389 A2MP01023 1474 aa17.04■□□□□ 0.32
TM9SF4-203ENST00000417389 ARHGEF5Q12774 1597 aa17.03■□□□□ 0.32
TM9SF4-203ENST00000417389 REREQ9P2R6 1566 aa17.03■□□□□ 0.32
TM9SF4-203ENST00000417389 RTEL1-TNFRSF6BF6WH68 1400 aa17.03■□□□□ 0.32
TM9SF4-203ENST00000417389 PTPN23Q9H3S7 1636 aa17.03■□□□□ 0.32
TM9SF4-203ENST00000417389 GGT6Q6P531 493 aa17.02■□□□□ 0.32
TM9SF4-203ENST00000417389 FER1L4A9Z1Z3 1794 aa17.01■□□□□ 0.31
TM9SF4-203ENST00000417389 AGLP35573 1532 aa17■□□□□ 0.31
TM9SF4-203ENST00000417389 ADGBQ8N7X0 1667 aa16.99■□□□□ 0.31
TM9SF4-203ENST00000417389 KIF3BO15066 747 aa16.97■□□□□ 0.31
TM9SF4-203ENST00000417389 CEBPAP49715 358 aaPredicted RBP16.97■□□□□ 0.31
TM9SF4-203ENST00000417389 CHIC2Q9UKJ5 165 aa16.97■□□□□ 0.31
TM9SF4-203ENST00000417389 DHX29Q7Z478 1369 aaKnown RBP16.97■□□□□ 0.31
TM9SF4-203ENST00000417389 TCOF1Q13428 1488 aaKnown RBP16.95■□□□□ 0.3
TM9SF4-203ENST00000417389 ABCC5O15440 1437 aa16.95■□□□□ 0.3
TM9SF4-203ENST00000417389 DAPK1P53355 1430 aa16.95■□□□□ 0.3
TM9SF4-203ENST00000417389 PLXNC1O60486 1568 aa16.94■□□□□ 0.3
TM9SF4-203ENST00000417389 RRP7BPQ9NSQ0 103 aa16.94■□□□□ 0.3
TM9SF4-203ENST00000417389 ITGAEP38570 1179 aa16.92■□□□□ 0.3
TM9SF4-203ENST00000417389 CNTLNQ9NXG0 1405 aa16.92■□□□□ 0.3
TM9SF4-203ENST00000417389 MAST1Q9Y2H9 1570 aa16.92■□□□□ 0.3
TM9SF4-203ENST00000417389 DNMT1P26358 1616 aaKnown RBP16.91■□□□□ 0.3
TM9SF4-203ENST00000417389 KIF15Q9NS87 1388 aa16.9■□□□□ 0.3
TM9SF4-203ENST00000417389 SHANK2Q9UPX8 1470 aa16.9■□□□□ 0.3
TM9SF4-203ENST00000417389 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.3
TM9SF4-203ENST00000417389 CROCC2H7BZ55 1655 aa16.89■□□□□ 0.29
TM9SF4-203ENST00000417389 PPP6R1Q9UPN7 881 aa16.88■□□□□ 0.29
TM9SF4-203ENST00000417389 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
TM9SF4-203ENST00000417389 ZMYM3Q14202 1370 aa16.87■□□□□ 0.29
TM9SF4-203ENST00000417389 DUOX2Q9NRD8 1548 aa16.86■□□□□ 0.29
TM9SF4-203ENST00000417389 CLTCQ00610 1675 aaKnown RBP16.86■□□□□ 0.29
TM9SF4-203ENST00000417389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.291e-9■□□□□ 9.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms