RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 CFDP1Q9UEE9 299 aaPredicted RBP19.41■□□□□ 0.7
HNF4A-204ENST00000415691 ZNF644Q9H582 1327 aaPredicted RBP19.4■□□□□ 0.7
HNF4A-204ENST00000415691 ZNF777Q9ULD5 760 aaPredicted RBP19.4■□□□□ 0.7
HNF4A-204ENST00000415691 FAM50AQ14320 339 aaKnown RBP19.39■□□□□ 0.69
HNF4A-204ENST00000415691 FGD6Q6ZV73 1430 aa19.39■□□□□ 0.69
HNF4A-204ENST00000415691 RRBP1Q9P2E9 1410 aaKnown RBP19.37■□□□□ 0.69
HNF4A-204ENST00000415691 PLCH2O75038 1416 aa19.35■□□□□ 0.69
HNF4A-204ENST00000415691 CDC42BPAQ5VT25 1732 aa19.35■□□□□ 0.69
HNF4A-204ENST00000415691 ABCA9Q8IUA7 1624 aa19.35■□□□□ 0.69
HNF4A-204ENST00000415691 CD109Q6YHK3 1445 aa19.34■□□□□ 0.69
HNF4A-204ENST00000415691 DIP2BQ9P265 1576 aa19.33■□□□□ 0.69
HNF4A-204ENST00000415691 MIA2Q96PC5 1412 aa19.33■□□□□ 0.69
HNF4A-204ENST00000415691 ITGAEP38570 1179 aa19.33■□□□□ 0.69
HNF4A-204ENST00000415691 CDC42BPBQ9Y5S2 1711 aa19.31■□□□□ 0.68
HNF4A-204ENST00000415691 ARHGAP5Q13017 1502 aa19.31■□□□□ 0.68
HNF4A-204ENST00000415691 TRHP20396 242 aaPredicted RBP19.3■□□□□ 0.68
HNF4A-204ENST00000415691 EFCAB2Q5VUJ9 269 aa19.3■□□□□ 0.68
HNF4A-204ENST00000415691 GLI2P10070 1586 aa19.3■□□□□ 0.68
HNF4A-204ENST00000415691 PTPN23Q9H3S7 1636 aa19.3■□□□□ 0.68
HNF4A-204ENST00000415691 MYO5CQ9NQX4 1742 aa19.29■□□□□ 0.68
HNF4A-204ENST00000415691 PREX2Q70Z35 1606 aa19.29■□□□□ 0.68
HNF4A-204ENST00000415691 HNRNPMP52272 730 aaKnown RBP eCLIP19.29■□□□□ 0.68
HNF4A-204ENST00000415691 ITSN2Q9NZM3 1697 aa19.29■□□□□ 0.68
HNF4A-204ENST00000415691 TCOF1Q13428 1488 aaKnown RBP19.27■□□□□ 0.68
HNF4A-204ENST00000415691 CAMSAP2Q08AD1 1489 aa19.26■□□□□ 0.67
HNF4A-204ENST00000415691 MAP3K4Q9Y6R4 1608 aa19.25■□□□□ 0.67
HNF4A-204ENST00000415691 FANCAO15360 1455 aa19.25■□□□□ 0.67
HNF4A-204ENST00000415691 YTHDC1Q96MU7 727 aaKnown RBP19.25■□□□□ 0.67
HNF4A-204ENST00000415691 KIF13AQ9H1H9 1805 aa19.25■□□□□ 0.67
HNF4A-204ENST00000415691 SAMD9LQ8IVG5 1584 aa19.24■□□□□ 0.67
HNF4A-204ENST00000415691 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.24■□□□□ 0.672e-7■□□□□ 10.3
HNF4A-204ENST00000415691 MIER1Q8N108 512 aa19.23■□□□□ 0.67
HNF4A-204ENST00000415691 ARAP3Q8WWN8 1544 aa19.22■□□□□ 0.67
HNF4A-204ENST00000415691 PTPRKQ15262 1439 aa19.21■□□□□ 0.67
HNF4A-204ENST00000415691 ARHGEF12Q9NZN5 1544 aa19.21■□□□□ 0.67
HNF4A-204ENST00000415691 ANP32EQ9BTT0 268 aa19.2■□□□□ 0.66
HNF4A-204ENST00000415691 CHIC2Q9UKJ5 165 aa19.2■□□□□ 0.66
HNF4A-204ENST00000415691 TSPOAP1O95153 1857 aa19.2■□□□□ 0.66
HNF4A-204ENST00000415691 AKNAQ7Z591 1439 aa19.2■□□□□ 0.66
HNF4A-204ENST00000415691 MBD5Q9P267 1494 aa19.19■□□□□ 0.66
HNF4A-204ENST00000415691 ABCC5O15440 1437 aa19.18■□□□□ 0.66
HNF4A-204ENST00000415691 AFAP1Q8N556 730 aa19.17■□□□□ 0.66
HNF4A-204ENST00000415691 SCAPERQ9BY12 1400 aa19.17■□□□□ 0.66
HNF4A-204ENST00000415691 SYCP2Q9BX26 1530 aa19.17■□□□□ 0.66
HNF4A-204ENST00000415691 DAPK1P53355 1430 aa19.16■□□□□ 0.66
HNF4A-204ENST00000415691 PPRC1Q5VV67 1664 aaKnown RBP19.16■□□□□ 0.66
HNF4A-204ENST00000415691 ADGRL1O94910 1474 aa19.16■□□□□ 0.66
HNF4A-204ENST00000415691 KIAA1107Q9UPP5 1409 aa19.16■□□□□ 0.66
HNF4A-204ENST00000415691 TRAPPC8Q9Y2L5 1435 aa19.16■□□□□ 0.66
HNF4A-204ENST00000415691 BCL11AQ9H165 835 aa19.15■□□□□ 0.66
HNF4A-204ENST00000415691 ABCC1P33527 1531 aa19.14■□□□□ 0.65
HNF4A-204ENST00000415691 PLEKHH2Q8IVE3 1493 aa19.14■□□□□ 0.65
HNF4A-204ENST00000415691 NEO1Q92859 1461 aa19.14■□□□□ 0.65
HNF4A-204ENST00000415691 RAPGEF3O95398 923 aa19.13■□□□□ 0.65
HNF4A-204ENST00000415691 DNMT1P26358 1616 aaKnown RBP19.12■□□□□ 0.65
HNF4A-204ENST00000415691 TSPY4P0CV99 314 aa19.12■□□□□ 0.65
HNF4A-204ENST00000415691 TSPY10P0CW01 314 aa19.12■□□□□ 0.65
HNF4A-204ENST00000415691 RSPH4AQ5TD94 716 aa19.12■□□□□ 0.65
HNF4A-204ENST00000415691 RRP7BPQ9NSQ0 103 aa19.11■□□□□ 0.65
HNF4A-204ENST00000415691 TEX14Q8IWB6 1497 aa19.1■□□□□ 0.65
HNF4A-204ENST00000415691 CCDC141Q6ZP82 1450 aa19.09■□□□□ 0.65
HNF4A-204ENST00000415691 SUPT16HQ9Y5B9 1047 aaKnown RBP19.09■□□□□ 0.65
HNF4A-204ENST00000415691 ARHGEF5Q12774 1597 aa19.09■□□□□ 0.65
HNF4A-204ENST00000415691 CFAP74Q9C0B2 1584 aa19.08■□□□□ 0.65
HNF4A-204ENST00000415691 C9orf84Q5VXU9 1444 aa19.06■□□□□ 0.64
HNF4A-204ENST00000415691 COL17A1Q9UMD9 1497 aaPredicted RBP19.06■□□□□ 0.64
HNF4A-204ENST00000415691 DENND4BO75064 1496 aaPredicted RBP19.06■□□□□ 0.64
HNF4A-204ENST00000415691 SPAG9O60271 1321 aaKnown RBP19.05■□□□□ 0.64
HNF4A-204ENST00000415691 MYT1LQ9UL68 1186 aa19.05■□□□□ 0.64
HNF4A-204ENST00000415691 POGZQ7Z3K3 1410 aa19.04■□□□□ 0.64
HNF4A-204ENST00000415691 TSHZ2Q9NRE2 1034 aa19.03■□□□□ 0.64
HNF4A-204ENST00000415691 NCOA1Q15788 1441 aa19.02■□□□□ 0.64
HNF4A-204ENST00000415691 CROCC2H7BZ55 1655 aa19.02■□□□□ 0.64
HNF4A-204ENST00000415691 ZNF518AQ6AHZ1 1483 aa19.01■□□□□ 0.63
HNF4A-204ENST00000415691 SHANK2Q9UPX8 1470 aa19.01■□□□□ 0.63
HNF4A-204ENST00000415691 ROCK1Q13464 1354 aa19■□□□□ 0.63
HNF4A-204ENST00000415691 ANKRD30AQ9BXX3 1397 aa19■□□□□ 0.63
HNF4A-204ENST00000415691 NAIPQ13075 1403 aa18.99■□□□□ 0.63
HNF4A-204ENST00000415691 SETD5Q9C0A6 1442 aa18.98■□□□□ 0.63
HNF4A-204ENST00000415691 ADGRL2O95490 1459 aa18.98■□□□□ 0.63
HNF4A-204ENST00000415691 HFM1A2PYH4 1435 aa18.98■□□□□ 0.63
HNF4A-204ENST00000415691 FRMPD1Q5SYB0 1578 aa18.96■□□□□ 0.63
HNF4A-204ENST00000415691 MAST1Q9Y2H9 1570 aa18.96■□□□□ 0.63
HNF4A-204ENST00000415691 RAB3GAP2Q9H2M9 1393 aa18.96■□□□□ 0.63
HNF4A-204ENST00000415691 RICTORQ6R327 1708 aa18.96■□□□□ 0.63
HNF4A-204ENST00000415691 RTEL1-TNFRSF6BF6WH68 1400 aa18.96■□□□□ 0.63
HNF4A-204ENST00000415691 KIF15Q9NS87 1388 aa18.96■□□□□ 0.63
HNF4A-204ENST00000415691 KDM5CP41229 1560 aa18.96■□□□□ 0.63
HNF4A-204ENST00000415691 ZFYVE16Q7Z3T8 1539 aa18.94■□□□□ 0.62
HNF4A-204ENST00000415691 ATP7AQ04656 1500 aa18.94■□□□□ 0.62
HNF4A-204ENST00000415691 MLH3Q9UHC1 1453 aa18.94■□□□□ 0.62
HNF4A-204ENST00000415691 ADGBQ8N7X0 1667 aa18.93■□□□□ 0.62
HNF4A-204ENST00000415691 KDM6BO15054 1643 aa18.93■□□□□ 0.62
HNF4A-204ENST00000415691 INO80Q9ULG1 1556 aaPredicted RBP18.92■□□□□ 0.62
HNF4A-204ENST00000415691 YEATS2Q9ULM3 1422 aa18.92■□□□□ 0.62
HNF4A-204ENST00000415691 KIDINS220Q9ULH0 1771 aa18.92■□□□□ 0.62
HNF4A-204ENST00000415691 ANKRD50Q9ULJ7 1429 aa18.9■□□□□ 0.62
HNF4A-204ENST00000415691 HECW2Q9P2P5 1572 aa18.89■□□□□ 0.62
HNF4A-204ENST00000415691 PLXNC1O60486 1568 aa18.88■□□□□ 0.61
HNF4A-204ENST00000415691 GCC2Q8IWJ2 1684 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms