RNA–Protein interactions for RNA: ENST00000415288.6

ERBB3-203, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2 BASIC

Gene ERBB3, Length 4,353 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-203ENST00000415288 PDCL3Q9H2J4 239 aa12.19□□□□□ -0.46
ERBB3-203ENST00000415288 ESPNB1AK53 854 aa12.18□□□□□ -0.46
ERBB3-203ENST00000415288 NCLP19338 710 aaKnown RBP12.18□□□□□ -0.46
ERBB3-203ENST00000415288 R3HCC1Q9Y3T6 440 aaKnown RBP12.18□□□□□ -0.46
ERBB3-203ENST00000415288 NACADO15069 1562 aa12.18□□□□□ -0.46
ERBB3-203ENST00000415288 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
ERBB3-203ENST00000415288 CLCN1P35523 988 aa12.15□□□□□ -0.46
ERBB3-203ENST00000415288 CRBNQ96SW2 442 aa12.15□□□□□ -0.46
ERBB3-203ENST00000415288 FAM161AQ3B820 660 aa12.15□□□□□ -0.46
ERBB3-203ENST00000415288 CHIC2Q9UKJ5 165 aa12.15□□□□□ -0.46
ERBB3-203ENST00000415288 SETD5Q9C0A6 1442 aa12.15□□□□□ -0.47
ERBB3-203ENST00000415288 TPM2P07951 284 aa12.14□□□□□ -0.47
ERBB3-203ENST00000415288 XRCC6P12956 609 aaKnown RBP eCLIP12.14□□□□□ -0.47
ERBB3-203ENST00000415288 SCRIBQ14160 1630 aa12.12□□□□□ -0.47
ERBB3-203ENST00000415288 VGLL3A8MV65 326 aa12.12□□□□□ -0.47
ERBB3-203ENST00000415288 NAP1L2Q9ULW6 460 aaPredicted RBP12.12□□□□□ -0.47
ERBB3-203ENST00000415288 PTMAP06454 111 aaKnown RBP12.1□□□□□ -0.47
ERBB3-203ENST00000415288 CALD1Q05682 793 aaKnown RBP12.09□□□□□ -0.47
ERBB3-203ENST00000415288 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.08□□□□□ -0.48
ERBB3-203ENST00000415288 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
ERBB3-203ENST00000415288 ABCC9O60706 1549 aa12.08□□□□□ -0.48
ERBB3-203ENST00000415288 MRE11P49959 708 aa12.08□□□□□ -0.48
ERBB3-203ENST00000415288 RRP7BPQ9NSQ0 103 aa12.07□□□□□ -0.48
ERBB3-203ENST00000415288 FOXD4L1Q9NU39 408 aa12.07□□□□□ -0.48
ERBB3-203ENST00000415288 TRAK2O60296 914 aa12.07□□□□□ -0.48
ERBB3-203ENST00000415288 TPRNQ4KMQ1 711 aa12.06□□□□□ -0.48
ERBB3-203ENST00000415288 FOXD1Q16676 465 aa12.06□□□□□ -0.48
ERBB3-203ENST00000415288 GRPEL1Q9HAV7 217 aa12.05□□□□□ -0.48
ERBB3-203ENST00000415288 CDCA7LQ96GN5 454 aa12.04□□□□□ -0.48
ERBB3-203ENST00000415288 E9PSI1 815 aa12.04□□□□□ -0.48
ERBB3-203ENST00000415288 CHMP4AQ9BY43 222 aa12.04□□□□□ -0.48
ERBB3-203ENST00000415288 UQCRHLA0A096LP55 91 aa12.03□□□□□ -0.48
ERBB3-203ENST00000415288 UQCRHP07919 91 aa12.03□□□□□ -0.48
ERBB3-203ENST00000415288 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.03□□□□□ -0.48
ERBB3-203ENST00000415288 CECR2Q9BXF3 1484 aa12.03□□□□□ -0.48
ERBB3-203ENST00000415288 SMG6Q86US8 1419 aaKnown RBP12.02□□□□□ -0.48
ERBB3-203ENST00000415288 CBX1P83916 185 aa12.02□□□□□ -0.49
ERBB3-203ENST00000415288 ZNF771Q7L3S4 317 aaPredicted RBP12.02□□□□□ -0.49
ERBB3-203ENST00000415288 MAP7D2Q96T17 732 aa12.01□□□□□ -0.49
ERBB3-203ENST00000415288 IGSF3O75054 1194 aa12.01□□□□□ -0.49
ERBB3-203ENST00000415288 GOLGA6L22H0YM25 854 aa12□□□□□ -0.49
ERBB3-203ENST00000415288 CENPQQ7L2Z9 268 aaPredicted RBP12□□□□□ -0.49
ERBB3-203ENST00000415288 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
ERBB3-203ENST00000415288 CGNQ9P2M7 1197 aaKnown RBP11.99□□□□□ -0.49
ERBB3-203ENST00000415288 HSP90AB1P08238 724 aaKnown RBP11.99□□□□□ -0.49
ERBB3-203ENST00000415288 MFAP1P55081 439 aaKnown RBP11.99□□□□□ -0.49
ERBB3-203ENST00000415288 MCM4P33991 863 aa11.98□□□□□ -0.49
ERBB3-203ENST00000415288 PLCB2Q00722 1185 aa11.98□□□□□ -0.49
ERBB3-203ENST00000415288 HSCBQ8IWL3 235 aa11.98□□□□□ -0.49
ERBB3-203ENST00000415288 XPCQ01831 940 aaPredicted RBP11.98□□□□□ -0.49
ERBB3-203ENST00000415288 TAF7LQ5H9L4 462 aa11.98□□□□□ -0.49
ERBB3-203ENST00000415288 KTN1Q86UP2 1357 aaKnown RBP11.97□□□□□ -0.49
ERBB3-203ENST00000415288 CNTLNQ9NXG0 1405 aa11.97□□□□□ -0.49
ERBB3-203ENST00000415288 MPNDQ8N594 471 aa11.97□□□□□ -0.49
ERBB3-203ENST00000415288 L3MBTL2Q969R5 705 aa11.97□□□□□ -0.49
ERBB3-203ENST00000415288 WDR43Q15061 677 aaKnown RBP eCLIP11.96□□□□□ -0.49
ERBB3-203ENST00000415288 C20orf194Q5TEA3 1177 aa11.96□□□□□ -0.49
ERBB3-203ENST00000415288 KDM2AQ9Y2K7 1162 aa11.96□□□□□ -0.49
ERBB3-203ENST00000415288 NASPP49321 788 aaPredicted RBP11.96□□□□□ -0.49
ERBB3-203ENST00000415288 CC2D1BQ5T0F9 858 aaKnown RBP11.96□□□□□ -0.49
ERBB3-203ENST00000415288 RAPGEF2Q9Y4G8 1499 aa11.95□□□□□ -0.5
ERBB3-203ENST00000415288 ARID3CA6NKF2 412 aa11.95□□□□□ -0.5
ERBB3-203ENST00000415288 DDX11L8A8MPP1 907 aa11.94□□□□□ -0.5
ERBB3-203ENST00000415288 GBP4Q96PP9 640 aa11.93□□□□□ -0.5
ERBB3-203ENST00000415288 KIF7Q2M1P5 1343 aa11.93□□□□□ -0.5
ERBB3-203ENST00000415288 DDX49Q9Y6V7 483 aaKnown RBP11.93□□□□□ -0.5
ERBB3-203ENST00000415288 CCDC7Q96M83 1385 aa11.93□□□□□ -0.5
ERBB3-203ENST00000415288 ZSCAN30Q86W11 494 aa11.93□□□□□ -0.5
ERBB3-203ENST00000415288 CHMP5Q9NZZ3 219 aa11.93□□□□□ -0.5
ERBB3-203ENST00000415288 TNNT3P45378 269 aaPredicted RBP11.92□□□□□ -0.5
ERBB3-203ENST00000415288 ERBB4Q15303 1308 aa11.92□□□□□ -0.5
ERBB3-203ENST00000415288 PRDM4Q9UKN5 801 aa11.92□□□□□ -0.5
ERBB3-203ENST00000415288 PPP4R3BQ5MIZ7 849 aa11.92□□□□□ -0.5
ERBB3-203ENST00000415288 SPDYE4A6NLX3 237 aa11.91□□□□□ -0.5
ERBB3-203ENST00000415288 C8orf34Q49A92 452 aa11.91□□□□□ -0.5
ERBB3-203ENST00000415288 SMAP1Q8IYB5 467 aaPredicted RBP11.9□□□□□ -0.5
ERBB3-203ENST00000415288 MROH2BQ7Z745 1585 aa11.9□□□□□ -0.5
ERBB3-203ENST00000415288 MTERF4Q7Z6M4 381 aaKnown RBP11.9□□□□□ -0.51
ERBB3-203ENST00000415288 TRERF1Q96PN7 1200 aa11.89□□□□□ -0.51
ERBB3-203ENST00000415288 MAPKBP1O60336 1514 aa11.89□□□□□ -0.51
ERBB3-203ENST00000415288 PNISRQ8TF01 805 aaKnown RBP11.89□□□□□ -0.51
ERBB3-203ENST00000415288 FAM177BA6PVY3 158 aa11.88□□□□□ -0.51
ERBB3-203ENST00000415288 SLC4A1APQ9BWU0 796 aaKnown RBP11.88□□□□□ -0.51
ERBB3-203ENST00000415288 GTF2E1P29083 439 aaPredicted RBP11.88□□□□□ -0.51
ERBB3-203ENST00000415288 CCDC173Q0VFZ6 552 aa11.87□□□□□ -0.51
ERBB3-203ENST00000415288 NEUROD2Q15784 382 aa11.87□□□□□ -0.51
ERBB3-203ENST00000415288 TBC1D2Q9BYX2 928 aa11.87□□□□□ -0.51
ERBB3-203ENST00000415288 SEC24BO95487 1268 aa11.87□□□□□ -0.51
ERBB3-203ENST00000415288 STAC3Q96MF2 364 aa11.87□□□□□ -0.51
ERBB3-203ENST00000415288 KIF21BO75037 1637 aa11.87□□□□□ -0.51
ERBB3-203ENST00000415288 RNF214Q8ND24 703 aa11.86□□□□□ -0.51
ERBB3-203ENST00000415288 RRBP1Q9P2E9 1410 aaKnown RBP11.86□□□□□ -0.51
ERBB3-203ENST00000415288 CERS3Q8IU89 383 aa11.86□□□□□ -0.51
ERBB3-203ENST00000415288 TSC1Q92574 1164 aa11.86□□□□□ -0.51
ERBB3-203ENST00000415288 ZBTB22O15209 634 aa11.85□□□□□ -0.51
ERBB3-203ENST00000415288 KIAA2012Q0VF49 1180 aa11.85□□□□□ -0.51
ERBB3-203ENST00000415288 PDE3BQ13370 1112 aa11.85□□□□□ -0.51
ERBB3-203ENST00000415288 FOXD4L5Q5VV16 416 aaPredicted RBP11.85□□□□□ -0.51
ERBB3-203ENST00000415288 FOXD4L4Q8WXT5 416 aaPredicted RBP11.85□□□□□ -0.51
ERBB3-203ENST00000415288 OFD1O75665 1012 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms