RNA–Protein interactions for RNA: ENST00000415288.6

ERBB3-203, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2 BASIC

Gene ERBB3, Length 4,353 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-203ENST00000415288 PELP1Q8IZL8 1130 aaKnown RBP16.07■□□□□ 0.16
ERBB3-203ENST00000415288 PPARGC1BQ86YN6 1023 aaKnown RBP15.74■□□□□ 0.11
ERBB3-203ENST00000415288 HRCP23327 699 aa15.73■□□□□ 0.11
ERBB3-203ENST00000415288 PCGF6Q9BYE7 350 aa15.69■□□□□ 0.1
ERBB3-203ENST00000415288 MYT1Q01538 1121 aa15.61■□□□□ 0.09
ERBB3-203ENST00000415288 SUPT5HO00267 1087 aaKnown RBP15.3■□□□□ 0.04
ERBB3-203ENST00000415288 SCAF1Q9H7N4 1312 aaKnown RBP15.21■□□□□ 0.03
ERBB3-203ENST00000415288 NISCHQ9Y2I1 1504 aa14.99□□□□□ -0.01
ERBB3-203ENST00000415288 SHROOM4Q9ULL8 1493 aa14.98□□□□□ -0.01
ERBB3-203ENST00000415288 GTF3C3Q9Y5Q9 886 aa14.92□□□□□ -0.02
ERBB3-203ENST00000415288 CENPBP07199 599 aaPredicted RBP14.89□□□□□ -0.03
ERBB3-203ENST00000415288 YTHDC1Q96MU7 727 aaKnown RBP14.81□□□□□ -0.04
ERBB3-203ENST00000415288 ACIN1Q9UKV3 1341 aaKnown RBP14.76□□□□□ -0.05
ERBB3-203ENST00000415288 ZEB1P37275 1124 aaPredicted RBP14.75□□□□□ -0.05
ERBB3-203ENST00000415288 NEUROD1Q13562 356 aa14.75□□□□□ -0.05
ERBB3-203ENST00000415288 EHMT2Q96KQ7 1210 aa14.7□□□□□ -0.06
ERBB3-203ENST00000415288 TRIM26Q12899 539 aaPredicted RBP14.66□□□□□ -0.06
ERBB3-203ENST00000415288 BCL11AQ9H165 835 aa14.63□□□□□ -0.07
ERBB3-203ENST00000415288 LOC105371045A0A1W2PR82 267 aa14.62□□□□□ -0.07
ERBB3-203ENST00000415288 TTBK1Q5TCY1 1321 aaPredicted RBP14.53□□□□□ -0.08
ERBB3-203ENST00000415288 CHIC1Q5VXU3 224 aa14.52□□□□□ -0.09
ERBB3-203ENST00000415288 CCER1Q8TC90 406 aaPredicted RBP14.48□□□□□ -0.09
ERBB3-203ENST00000415288 DIEXFQ68CQ4 756 aaKnown RBP14.46□□□□□ -0.09
ERBB3-203ENST00000415288 FAM9AQ8IZU1 332 aaPredicted RBP14.4□□□□□ -0.1
ERBB3-203ENST00000415288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.34□□□□□ -0.11
ERBB3-203ENST00000415288 MYO15BQ96JP2 1530 aa14.33□□□□□ -0.11
ERBB3-203ENST00000415288 DCAF8L2P0C7V8 631 aa14.31□□□□□ -0.12
ERBB3-203ENST00000415288 PRKCSHP14314 528 aaPredicted RBP14.3□□□□□ -0.12
ERBB3-203ENST00000415288 ANP32EQ9BTT0 268 aa14.24□□□□□ -0.13
ERBB3-203ENST00000415288 ERICH6Q7L0X2 663 aa14.23□□□□□ -0.13
ERBB3-203ENST00000415288 CSRNP3Q8WYN3 585 aa14.17□□□□□ -0.14
ERBB3-203ENST00000415288 BCANQ96GW7 911 aa14.14□□□□□ -0.15
ERBB3-203ENST00000415288 DCAF1Q9Y4B6 1507 aa14.04□□□□□ -0.16
ERBB3-203ENST00000415288 MIER1Q8N108 512 aa13.93□□□□□ -0.18
ERBB3-203ENST00000415288 ZNF316A6NFI3 1004 aaPredicted RBP13.9□□□□□ -0.18
ERBB3-203ENST00000415288 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
ERBB3-203ENST00000415288 TSHZ2Q9NRE2 1034 aa13.86□□□□□ -0.19
ERBB3-203ENST00000415288 NEFLP07196 543 aa13.85□□□□□ -0.19
ERBB3-203ENST00000415288 SUPT16HQ9Y5B9 1047 aaKnown RBP13.83□□□□□ -0.2
ERBB3-203ENST00000415288 CCDC180Q9P1Z9 1646 aa13.82□□□□□ -0.2
ERBB3-203ENST00000415288 CCDC136Q96JN2 1154 aa13.76□□□□□ -0.21
ERBB3-203ENST00000415288 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
ERBB3-203ENST00000415288 EIF5BO60841 1220 aaKnown RBP13.74□□□□□ -0.21
ERBB3-203ENST00000415288 ITGAEP38570 1179 aa13.74□□□□□ -0.21
ERBB3-203ENST00000415288 FKBP8Q14318 412 aa13.72□□□□□ -0.21
ERBB3-203ENST00000415288 RTN4Q9NQC3 1192 aaKnown RBP13.71□□□□□ -0.21
ERBB3-203ENST00000415288 NBR1Q14596 966 aa13.68□□□□□ -0.22
ERBB3-203ENST00000415288 HNRNPUL2Q1KMD3 747 aaKnown RBP13.67□□□□□ -0.22
ERBB3-203ENST00000415288 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.66□□□□□ -0.22
ERBB3-203ENST00000415288 RBM19Q9Y4C8 960 aaKnown RBP13.62□□□□□ -0.23
ERBB3-203ENST00000415288 DEKP35659 375 aaKnown RBP13.6□□□□□ -0.23
ERBB3-203ENST00000415288 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
ERBB3-203ENST00000415288 CLSPNQ9HAW4 1339 aa13.54□□□□□ -0.24
ERBB3-203ENST00000415288 SALL2Q9Y467 1007 aaPredicted RBP13.53□□□□□ -0.24
ERBB3-203ENST00000415288 CDK11AQ9UQ88 783 aaPredicted RBP13.51□□□□□ -0.25
ERBB3-203ENST00000415288 APLP2Q06481 763 aa13.46□□□□□ -0.26
ERBB3-203ENST00000415288 RANGAP1P46060 587 aaPredicted RBP13.44□□□□□ -0.26
ERBB3-203ENST00000415288 IRX6P78412 446 aaPredicted RBP13.44□□□□□ -0.26
ERBB3-203ENST00000415288 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
ERBB3-203ENST00000415288 MYT1LQ9UL68 1186 aa13.4□□□□□ -0.26
ERBB3-203ENST00000415288 UBTFP17480 764 aaKnown RBP13.35□□□□□ -0.27
ERBB3-203ENST00000415288 MSH5O43196 834 aa13.32□□□□□ -0.28
ERBB3-203ENST00000415288 KCNH8Q96L42 1107 aa13.29□□□□□ -0.28
ERBB3-203ENST00000415288 IL27Q8NEV9 243 aa13.28□□□□□ -0.28
ERBB3-203ENST00000415288 NPM2Q86SE8 214 aaKnown RBP13.25□□□□□ -0.29
ERBB3-203ENST00000415288 DDX10Q13206 875 aaKnown RBP13.22□□□□□ -0.29
ERBB3-203ENST00000415288 ANP32AP39687 249 aaKnown RBP13.2□□□□□ -0.3
ERBB3-203ENST00000415288 NOP58Q9Y2X3 529 aaKnown RBP13.2□□□□□ -0.3
ERBB3-203ENST00000415288 PKNOX2Q96KN3 472 aa13.19□□□□□ -0.3
ERBB3-203ENST00000415288 TIMELESSQ9UNS1 1208 aa13.19□□□□□ -0.3
ERBB3-203ENST00000415288 UBE2Q2Q8WVN8 375 aa13.17□□□□□ -0.3
ERBB3-203ENST00000415288 ZBTB47Q9UFB7 747 aaPredicted RBP13.17□□□□□ -0.3
ERBB3-203ENST00000415288 GLIPR1L2Q4G1C9 344 aa13.17□□□□□ -0.3
ERBB3-203ENST00000415288 ERICH6BQ5W0A0 696 aa13.17□□□□□ -0.3
ERBB3-203ENST00000415288 CNGB1Q14028 1251 aaPredicted RBP13.16□□□□□ -0.3
ERBB3-203ENST00000415288 LAS1LQ9Y4W2 734 aaKnown RBP13.13□□□□□ -0.31
ERBB3-203ENST00000415288 HIRIP3Q9BW71 556 aaPredicted RBP13.12□□□□□ -0.31
ERBB3-203ENST00000415288 HNRNPUQ00839 825 aaKnown RBP eCLIP13.11□□□□□ -0.31
ERBB3-203ENST00000415288 ANP32CO43423 234 aa13.11□□□□□ -0.31
ERBB3-203ENST00000415288 DAXXQ9UER7 740 aaPredicted RBP13.09□□□□□ -0.31
ERBB3-203ENST00000415288 FANCIQ9NVI1 1328 aa13.08□□□□□ -0.32
ERBB3-203ENST00000415288 NEFMP07197 916 aa13.08□□□□□ -0.32
ERBB3-203ENST00000415288 B4GALNT3Q6L9W6 998 aa13.08□□□□□ -0.32
ERBB3-203ENST00000415288 VSIG10Q8N0Z9 540 aa13.07□□□□□ -0.32
ERBB3-203ENST00000415288 PODXL2Q9NZ53 605 aa13.06□□□□□ -0.32
ERBB3-203ENST00000415288 PLEKHG5O94827 1062 aa13.04□□□□□ -0.32
ERBB3-203ENST00000415288 PAK3O75914 559 aaPredicted RBP13.03□□□□□ -0.32
ERBB3-203ENST00000415288 ARXQ96QS3 562 aa13.02□□□□□ -0.32
ERBB3-203ENST00000415288 A0A0U1RQG5 324 aaPredicted RBP12.97□□□□□ -0.33
ERBB3-203ENST00000415288 BRPF3Q9ULD4 1205 aa12.95□□□□□ -0.34
ERBB3-203ENST00000415288 ARID4BQ4LE39 1312 aaPredicted RBP12.94□□□□□ -0.34
ERBB3-203ENST00000415288 SENP3-EIF4A1A0A087X0R7 540 aa12.94□□□□□ -0.34
ERBB3-203ENST00000415288 PPP4R2Q9NY27 417 aa12.91□□□□□ -0.34
ERBB3-203ENST00000415288 FAM9BQ8IZU0 186 aa12.9□□□□□ -0.35
ERBB3-203ENST00000415288 NAP1L5Q96NT1 182 aaPredicted RBP12.89□□□□□ -0.35
ERBB3-203ENST00000415288 IPO9Q96P70 1041 aaKnown RBP12.86□□□□□ -0.35
ERBB3-203ENST00000415288 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
ERBB3-203ENST00000415288 POLR3GLQ9BT43 218 aa12.85□□□□□ -0.35
ERBB3-203ENST00000415288 ZMYND15Q9H091 742 aa12.82□□□□□ -0.36
ERBB3-203ENST00000415288 SIN3AQ96ST3 1273 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms