RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 CDC42BPBQ9Y5S2 1711 aa39.88■■■■□ 3.98
CPNE1-207ENST00000414664 SCAPERQ9BY12 1400 aa39.87■■■■□ 3.97
CPNE1-207ENST00000414664 MAP3K1Q13233 1512 aa39.86■■■■□ 3.97
CPNE1-207ENST00000414664 CCNB3Q8WWL7 1395 aa39.85■■■■□ 3.97
CPNE1-207ENST00000414664 CDC42BPAQ5VT25 1732 aa39.85■■■■□ 3.97
CPNE1-207ENST00000414664 APLP2Q06481 763 aa39.84■■■■□ 3.97
CPNE1-207ENST00000414664 GPATCH8Q9UKJ3 1502 aaKnown RBP39.82■■■■□ 3.97
CPNE1-207ENST00000414664 FRMPD1Q5SYB0 1578 aa39.82■■■■□ 3.97
CPNE1-207ENST00000414664 RICTORQ6R327 1708 aa39.81■■■■□ 3.96
CPNE1-207ENST00000414664 LRRC9Q6ZRR7 1453 aa39.77■■■■□ 3.96
CPNE1-207ENST00000414664 POGZQ7Z3K3 1410 aa39.76■■■■□ 3.96
CPNE1-207ENST00000414664 CFDP1Q9UEE9 299 aaPredicted RBP39.76■■■■□ 3.96
CPNE1-207ENST00000414664 SUPT6HQ7KZ85 1726 aaKnown RBP39.76■■■■□ 3.96
CPNE1-207ENST00000414664 ZNF777Q9ULD5 760 aaPredicted RBP39.72■■■■□ 3.95
CPNE1-207ENST00000414664 NCOA2Q15596 1464 aa39.7■■■■□ 3.95
CPNE1-207ENST00000414664 ZMYM4Q5VZL5 1548 aa39.7■■■■□ 3.95
CPNE1-207ENST00000414664 ZNF518AQ6AHZ1 1483 aa39.68■■■■□ 3.94
CPNE1-207ENST00000414664 MAGI2Q86UL8 1455 aa39.68■■■■□ 3.94
CPNE1-207ENST00000414664 ITSN2Q9NZM3 1697 aa39.67■■■■□ 3.94
CPNE1-207ENST00000414664 KANK4Q5T7N3 995 aaPredicted RBP39.67■■■■□ 3.94
CPNE1-207ENST00000414664 ABCC1P33527 1531 aa39.66■■■■□ 3.94
CPNE1-207ENST00000414664 AFAP1Q8N556 730 aa39.62■■■■□ 3.93
CPNE1-207ENST00000414664 PLEKHH2Q8IVE3 1493 aa39.62■■■■□ 3.93
CPNE1-207ENST00000414664 AEBP2Q6ZN18 517 aaPredicted RBP39.61■■■■□ 3.93
CPNE1-207ENST00000414664 SAMD9LQ8IVG5 1584 aa39.61■■■■□ 3.93
CPNE1-207ENST00000414664 ZFYVE16Q7Z3T8 1539 aa39.6■■■■□ 3.93
CPNE1-207ENST00000414664 ARHGEF40Q8TER5 1519 aa39.59■■■■□ 3.93
CPNE1-207ENST00000414664 ARHGEF12Q9NZN5 1544 aa39.59■■■■□ 3.93
CPNE1-207ENST00000414664 KIAA1107Q9UPP5 1409 aa39.57■■■■□ 3.93
CPNE1-207ENST00000414664 KDM4FA0A1W2PPD8 638 aa39.57■■■■□ 3.93
CPNE1-207ENST00000414664 KDM5CP41229 1560 aa39.56■■■■□ 3.92
CPNE1-207ENST00000414664 TRAPPC8Q9Y2L5 1435 aa39.55■■■■□ 3.92
CPNE1-207ENST00000414664 MYT1LQ9UL68 1186 aa39.54■■■■□ 3.92
CPNE1-207ENST00000414664 SYCP2Q9BX26 1530 aa39.52■■■■□ 3.92
CPNE1-207ENST00000414664 YEATS2Q9ULM3 1422 aa39.52■■■■□ 3.92
CPNE1-207ENST00000414664 HNRNPMP52272 730 aaKnown RBP eCLIP39.52■■■■□ 3.921e-7■■■■□ 25.4
CPNE1-207ENST00000414664 MLH3Q9UHC1 1453 aa39.48■■■■□ 3.91
CPNE1-207ENST00000414664 HECW2Q9P2P5 1572 aa39.47■■■■□ 3.91
CPNE1-207ENST00000414664 ARID4BQ4LE39 1312 aaPredicted RBP39.47■■■■□ 3.91
CPNE1-207ENST00000414664 ZNF644Q9H582 1327 aaPredicted RBP39.47■■■■□ 3.91
CPNE1-207ENST00000414664 ATP10AO60312 1499 aa39.43■■■■□ 3.9
CPNE1-207ENST00000414664 MYOM3Q5VTT5 1437 aa39.4■■■■□ 3.9
CPNE1-207ENST00000414664 SPAG9O60271 1321 aaKnown RBP39.39■■■■□ 3.9
CPNE1-207ENST00000414664 C9orf84Q5VXU9 1444 aa39.38■■■■□ 3.89
CPNE1-207ENST00000414664 CAMSAP2Q08AD1 1489 aa39.37■■■■□ 3.89
CPNE1-207ENST00000414664 MIA2Q96PC5 1412 aa39.37■■■■□ 3.89
CPNE1-207ENST00000414664 RSPH4AQ5TD94 716 aa39.36■■■■□ 3.89
CPNE1-207ENST00000414664 MBD5Q9P267 1494 aa39.36■■■■□ 3.89
CPNE1-207ENST00000414664 DIP2CQ9Y2E4 1556 aa39.32■■■■□ 3.88
CPNE1-207ENST00000414664 KIDINS220Q9ULH0 1771 aa39.31■■■■□ 3.88
CPNE1-207ENST00000414664 ABCA6Q8N139 1617 aa39.29■■■■□ 3.88
CPNE1-207ENST00000414664 BCORL1Q5H9F3 1711 aa39.28■■■■□ 3.88
CPNE1-207ENST00000414664 REREQ9P2R6 1566 aa39.25■■■■□ 3.87
CPNE1-207ENST00000414664 ATP7AQ04656 1500 aa39.25■■■■□ 3.87
CPNE1-207ENST00000414664 CCDC141Q6ZP82 1450 aa39.25■■■■□ 3.87
CPNE1-207ENST00000414664 ADAMTSL3P82987 1691 aa39.23■■■■□ 3.87
CPNE1-207ENST00000414664 SIGLEC1Q9BZZ2 1709 aa39.23■■■■□ 3.87
CPNE1-207ENST00000414664 INO80Q9ULG1 1556 aaPredicted RBP39.22■■■■□ 3.87
CPNE1-207ENST00000414664 ARHGEF5Q12774 1597 aa39.21■■■■□ 3.87
CPNE1-207ENST00000414664 RTEL1-TNFRSF6BF6WH68 1400 aa39.21■■■■□ 3.87
CPNE1-207ENST00000414664 TSPY4P0CV99 314 aa39.19■■■■□ 3.86
CPNE1-207ENST00000414664 TSPY10P0CW01 314 aa39.19■■■■□ 3.86
CPNE1-207ENST00000414664 MLECQ14165 292 aa39.17■■■■□ 3.86
CPNE1-207ENST00000414664 FGD6Q6ZV73 1430 aa39.15■■■■□ 3.86
CPNE1-207ENST00000414664 PTPN23Q9H3S7 1636 aa39.14■■■■□ 3.86
CPNE1-207ENST00000414664 AGLP35573 1532 aa39.14■■■■□ 3.86
CPNE1-207ENST00000414664 MADDQ8WXG6 1647 aa39.11■■■■□ 3.85
CPNE1-207ENST00000414664 A2MP01023 1474 aa39.08■■■■□ 3.85
CPNE1-207ENST00000414664 TCOF1Q13428 1488 aaKnown RBP39.07■■■■□ 3.85
CPNE1-207ENST00000414664 ADGBQ8N7X0 1667 aa39.06■■■■□ 3.84
CPNE1-207ENST00000414664 PTPRMP28827 1452 aa39.05■■■■□ 3.84
CPNE1-207ENST00000414664 RIMS1Q86UR5 1692 aaKnown RBP39■■■■□ 3.83
CPNE1-207ENST00000414664 MAST1Q9Y2H9 1570 aa39■■■■□ 3.83
CPNE1-207ENST00000414664 PPARGC1BQ86YN6 1023 aaKnown RBP39■■■■□ 3.83
CPNE1-207ENST00000414664 PLXNC1O60486 1568 aa38.99■■■■□ 3.83
CPNE1-207ENST00000414664 FER1L4A9Z1Z3 1794 aa38.99■■■■□ 3.83
CPNE1-207ENST00000414664 DHX29Q7Z478 1369 aaKnown RBP38.98■■■■□ 3.83
CPNE1-207ENST00000414664 FAM50AQ14320 339 aaKnown RBP38.94■■■■□ 3.82
CPNE1-207ENST00000414664 ESF1Q9H501 851 aaKnown RBP38.94■■■■□ 3.82
CPNE1-207ENST00000414664 ABCC5O15440 1437 aa38.94■■■■□ 3.82
CPNE1-207ENST00000414664 DAPK1P53355 1430 aa38.92■■■■□ 3.82
CPNE1-207ENST00000414664 DNMT1P26358 1616 aaKnown RBP38.92■■■■□ 3.82
CPNE1-207ENST00000414664 SHANK2Q9UPX8 1470 aa38.92■■■■□ 3.82
CPNE1-207ENST00000414664 CROCC2H7BZ55 1655 aa38.88■■■■□ 3.81
CPNE1-207ENST00000414664 GGT6Q6P531 493 aa38.85■■■■□ 3.81
CPNE1-207ENST00000414664 PPP6R1Q9UPN7 881 aa38.83■■■■□ 3.81
CPNE1-207ENST00000414664 CNTLNQ9NXG0 1405 aa38.82■■■■□ 3.81
CPNE1-207ENST00000414664 KIF3BO15066 747 aa38.82■■■■□ 3.8
CPNE1-207ENST00000414664 PLPPR3Q6T4P5 718 aa38.82■■■■□ 3.8
CPNE1-207ENST00000414664 ANKRD30AQ9BXX3 1397 aa38.76■■■■□ 3.8
CPNE1-207ENST00000414664 CHIC2Q9UKJ5 165 aa38.76■■■■□ 3.8
CPNE1-207ENST00000414664 DUOX2Q9NRD8 1548 aa38.75■■■■□ 3.79
CPNE1-207ENST00000414664 KIF15Q9NS87 1388 aa38.74■■■■□ 3.79
CPNE1-207ENST00000414664 RRP7BPQ9NSQ0 103 aa38.74■■■■□ 3.79
CPNE1-207ENST00000414664 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.72■■■■□ 3.797e-10■■□□□ 13.2
CPNE1-207ENST00000414664 CEBPAP49715 358 aaPredicted RBP38.72■■■■□ 3.79
CPNE1-207ENST00000414664 EIF2AK4Q9P2K8 1649 aaKnown RBP38.68■■■■□ 3.78
CPNE1-207ENST00000414664 MROH2AA6NES4 1674 aa38.67■■■■□ 3.78
CPNE1-207ENST00000414664 NCOA1Q15788 1441 aa38.66■■■■□ 3.78
CPNE1-207ENST00000414664 ADGRL2O95490 1459 aa38.66■■■■□ 3.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms