RNA–Protein interactions for RNA: ENST00000411917.1

PTPA-208, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-208ENST00000411917 CD109Q6YHK3 1445 aa30.94■■■□□ 2.54
PTPA-208ENST00000411917 CFDP1Q9UEE9 299 aaPredicted RBP30.94■■■□□ 2.54
PTPA-208ENST00000411917 CDC42BPBQ9Y5S2 1711 aa30.92■■■□□ 2.54
PTPA-208ENST00000411917 PTPN23Q9H3S7 1636 aa30.91■■■□□ 2.54
PTPA-208ENST00000411917 PLEKHH2Q8IVE3 1493 aa30.89■■■□□ 2.54
PTPA-208ENST00000411917 KIAA1107Q9UPP5 1409 aa30.88■■■□□ 2.53
PTPA-208ENST00000411917 ARHGAP5Q13017 1502 aa30.88■■■□□ 2.53
PTPA-208ENST00000411917 EFCAB2Q5VUJ9 269 aa30.87■■■□□ 2.53
PTPA-208ENST00000411917 CFAP74Q9C0B2 1584 aa30.87■■■□□ 2.53
PTPA-208ENST00000411917 FAM69CQ0P6D2 419 aa30.86■■■□□ 2.53
PTPA-208ENST00000411917 CAMSAP2Q08AD1 1489 aa30.84■■■□□ 2.53
PTPA-208ENST00000411917 NEO1Q92859 1461 aa30.84■■■□□ 2.53
PTPA-208ENST00000411917 KIF13AQ9H1H9 1805 aa30.83■■■□□ 2.53
PTPA-208ENST00000411917 FANCAO15360 1455 aa30.82■■■□□ 2.53
PTPA-208ENST00000411917 SAMD9LQ8IVG5 1584 aa30.8■■■□□ 2.52
PTPA-208ENST00000411917 TEX14Q8IWB6 1497 aa30.8■■■□□ 2.52
PTPA-208ENST00000411917 RSPH4AQ5TD94 716 aa30.79■■■□□ 2.52
PTPA-208ENST00000411917 ARHGEF5Q12774 1597 aa30.78■■■□□ 2.52
PTPA-208ENST00000411917 ABCC1P33527 1531 aa30.77■■■□□ 2.52
PTPA-208ENST00000411917 MBD5Q9P267 1494 aa30.75■■■□□ 2.51
PTPA-208ENST00000411917 AKNAQ7Z591 1439 aa30.73■■■□□ 2.51
PTPA-208ENST00000411917 DNMT1P26358 1616 aaKnown RBP30.72■■■□□ 2.51
PTPA-208ENST00000411917 PPRC1Q5VV67 1664 aaKnown RBP30.71■■■□□ 2.51
PTPA-208ENST00000411917 FAM50AQ14320 339 aaKnown RBP30.71■■■□□ 2.51
PTPA-208ENST00000411917 ZNF644Q9H582 1327 aaPredicted RBP30.71■■■□□ 2.51
PTPA-208ENST00000411917 SHANK2Q9UPX8 1470 aa30.7■■■□□ 2.5
PTPA-208ENST00000411917 DAPK1P53355 1430 aa30.67■■■□□ 2.5
PTPA-208ENST00000411917 ZNF777Q9ULD5 760 aaPredicted RBP30.67■■■□□ 2.5
PTPA-208ENST00000411917 ADGRL1O94910 1474 aa30.67■■■□□ 2.5
PTPA-208ENST00000411917 CCDC141Q6ZP82 1450 aa30.67■■■□□ 2.5
PTPA-208ENST00000411917 SYCP2Q9BX26 1530 aa30.67■■■□□ 2.5
PTPA-208ENST00000411917 ABCC5O15440 1437 aa30.66■■■□□ 2.5
PTPA-208ENST00000411917 ARHGEF12Q9NZN5 1544 aa30.64■■■□□ 2.5
PTPA-208ENST00000411917 SCAPERQ9BY12 1400 aa30.61■■■□□ 2.49
PTPA-208ENST00000411917 CROCC2H7BZ55 1655 aa30.6■■■□□ 2.49
PTPA-208ENST00000411917 ROCK1Q13464 1354 aa30.6■■■□□ 2.49
PTPA-208ENST00000411917 MAST1Q9Y2H9 1570 aa30.6■■■□□ 2.49
PTPA-208ENST00000411917 ADGRL2O95490 1459 aa30.58■■■□□ 2.49
PTPA-208ENST00000411917 ZNF518AQ6AHZ1 1483 aa30.58■■■□□ 2.49
PTPA-208ENST00000411917 POGZQ7Z3K3 1410 aa30.58■■■□□ 2.49
PTPA-208ENST00000411917 PTPRKQ15262 1439 aa30.56■■■□□ 2.48
PTPA-208ENST00000411917 HNRNPMP52272 730 aaKnown RBP eCLIP30.56■■■□□ 2.48
PTPA-208ENST00000411917 DENND4BO75064 1496 aaPredicted RBP30.56■■■□□ 2.48
PTPA-208ENST00000411917 RTEL1-TNFRSF6BF6WH68 1400 aa30.56■■■□□ 2.48
PTPA-208ENST00000411917 KDM5CP41229 1560 aa30.54■■■□□ 2.48
PTPA-208ENST00000411917 TRAPPC8Q9Y2L5 1435 aa30.54■■■□□ 2.48
PTPA-208ENST00000411917 TSPY4P0CV99 314 aa30.53■■■□□ 2.48
PTPA-208ENST00000411917 TSPY10P0CW01 314 aa30.53■■■□□ 2.48
PTPA-208ENST00000411917 TRHP20396 242 aaPredicted RBP30.52■■■□□ 2.48
PTPA-208ENST00000411917 C9orf84Q5VXU9 1444 aa30.52■■■□□ 2.48
PTPA-208ENST00000411917 PCGF6Q9BYE7 350 aa30.51■■■□□ 2.47
PTPA-208ENST00000411917 TSPOAP1O95153 1857 aa30.5■■■□□ 2.47
PTPA-208ENST00000411917 HFM1A2PYH4 1435 aa30.48■■■□□ 2.47
PTPA-208ENST00000411917 MLH3Q9UHC1 1453 aa30.48■■■□□ 2.47
PTPA-208ENST00000411917 NCOA1Q15788 1441 aa30.47■■■□□ 2.47
PTPA-208ENST00000411917 ADGBQ8N7X0 1667 aa30.46■■■□□ 2.47
PTPA-208ENST00000411917 ZMYM4Q5VZL5 1548 aa30.46■■■□□ 2.47
PTPA-208ENST00000411917 PLXNC1O60486 1568 aa30.45■■■□□ 2.47
PTPA-208ENST00000411917 RICTORQ6R327 1708 aa30.45■■■□□ 2.47
PTPA-208ENST00000411917 ANKRD30AQ9BXX3 1397 aa30.45■■■□□ 2.47
PTPA-208ENST00000411917 INO80Q9ULG1 1556 aaPredicted RBP30.45■■■□□ 2.46
PTPA-208ENST00000411917 ZFYVE16Q7Z3T8 1539 aa30.44■■■□□ 2.46
PTPA-208ENST00000411917 MAGI2Q86UL8 1455 aa30.43■■■□□ 2.46
PTPA-208ENST00000411917 SPAG9O60271 1321 aaKnown RBP30.42■■■□□ 2.46
PTPA-208ENST00000411917 FRMPD1Q5SYB0 1578 aa30.41■■■□□ 2.46
PTPA-208ENST00000411917 AFAP1Q8N556 730 aa30.41■■■□□ 2.46
PTPA-208ENST00000411917 ITGAEP38570 1179 aa30.4■■■□□ 2.46
PTPA-208ENST00000411917 ACIN1Q9UKV3 1341 aaKnown RBP30.4■■■□□ 2.46
PTPA-208ENST00000411917 ATP7AQ04656 1500 aa30.39■■■□□ 2.46
PTPA-208ENST00000411917 HRCP23327 699 aa30.39■■■□□ 2.46
PTPA-208ENST00000411917 NAIPQ13075 1403 aa30.39■■■□□ 2.45
PTPA-208ENST00000411917 HECW2Q9P2P5 1572 aa30.38■■■□□ 2.45
PTPA-208ENST00000411917 GCC2Q8IWJ2 1684 aa30.36■■■□□ 2.45
PTPA-208ENST00000411917 COL17A1Q9UMD9 1497 aaPredicted RBP30.35■■■□□ 2.45
PTPA-208ENST00000411917 SETD5Q9C0A6 1442 aa30.34■■■□□ 2.45
PTPA-208ENST00000411917 KIF15Q9NS87 1388 aa30.32■■■□□ 2.44
PTPA-208ENST00000411917 RAPGEF3O95398 923 aa30.32■■■□□ 2.44
PTPA-208ENST00000411917 CHIC2Q9UKJ5 165 aa30.32■■■□□ 2.44
PTPA-208ENST00000411917 KIDINS220Q9ULH0 1771 aa30.31■■■□□ 2.44
PTPA-208ENST00000411917 DUOX2Q9NRD8 1548 aa30.31■■■□□ 2.44
PTPA-208ENST00000411917 ERBINQ96RT1 1412 aa30.28■■■□□ 2.44
PTPA-208ENST00000411917 KDM6BO15054 1643 aa30.25■■■□□ 2.43
PTPA-208ENST00000411917 ANKRD50Q9ULJ7 1429 aa30.25■■■□□ 2.43
PTPA-208ENST00000411917 REREQ9P2R6 1566 aa30.24■■■□□ 2.43
PTPA-208ENST00000411917 RRP7BPQ9NSQ0 103 aa30.23■■■□□ 2.43
PTPA-208ENST00000411917 DHX29Q7Z478 1369 aaKnown RBP30.22■■■□□ 2.43
PTPA-208ENST00000411917 RAB3GAP2Q9H2M9 1393 aa30.22■■■□□ 2.43
PTPA-208ENST00000411917 DIP2CQ9Y2E4 1556 aa30.2■■■□□ 2.43
PTPA-208ENST00000411917 ABCA6Q8N139 1617 aa30.19■■■□□ 2.42
PTPA-208ENST00000411917 ARHGEF40Q8TER5 1519 aa30.19■■■□□ 2.42
PTPA-208ENST00000411917 EIF2AK4Q9P2K8 1649 aaKnown RBP30.18■■■□□ 2.42
PTPA-208ENST00000411917 A2MP01023 1474 aa30.18■■■□□ 2.42
PTPA-208ENST00000411917 BCORL1Q5H9F3 1711 aa30.16■■■□□ 2.42
PTPA-208ENST00000411917 ATP10AO60312 1499 aa30.15■■■□□ 2.42
PTPA-208ENST00000411917 YEATS2Q9ULM3 1422 aa30.14■■■□□ 2.42
PTPA-208ENST00000411917 AGLP35573 1532 aa30.11■■■□□ 2.41
PTPA-208ENST00000411917 MYT1LQ9UL68 1186 aa30.1■■■□□ 2.41
PTPA-208ENST00000411917 KDM5DQ9BY66 1539 aa30.07■■■□□ 2.4
PTPA-208ENST00000411917 UNC13BO14795 1591 aa30.06■■■□□ 2.4
PTPA-208ENST00000411917 DEPDC5O75140 1603 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms