RNA–Protein interactions for RNA: ENST00000411884.2

CLHC1-205, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 549 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-205ENST00000411884 MFSD10Q14728 455 aa9.8□□□□□ -0.84
CLHC1-205ENST00000411884 WDR70Q9NW82 654 aa9.8□□□□□ -0.84
CLHC1-205ENST00000411884 GPHNQ9NQX3 736 aaPredicted RBP9.79□□□□□ -0.84
CLHC1-205ENST00000411884 TMEM92Q6UXU6 159 aa9.76□□□□□ -0.85
CLHC1-205ENST00000411884 KIF3CO14782 793 aa9.75□□□□□ -0.85
CLHC1-205ENST00000411884 DDX27Q96GQ7 796 aaKnown RBP9.75□□□□□ -0.85
CLHC1-205ENST00000411884 POTEB2H3BUK9 544 aa9.74□□□□□ -0.85
CLHC1-205ENST00000411884 POTEJP0CG39 1038 aa9.74□□□□□ -0.85
CLHC1-205ENST00000411884 TMC2Q8TDI7 906 aa9.74□□□□□ -0.85
CLHC1-205ENST00000411884 KCNV2Q8TDN2 545 aa9.74□□□□□ -0.85
CLHC1-205ENST00000411884 C2orf72A6NCS6 295 aa9.73□□□□□ -0.85
CLHC1-205ENST00000411884 DSG2Q14126 1118 aa9.72□□□□□ -0.85
CLHC1-205ENST00000411884 E2F4Q16254 413 aa9.72□□□□□ -0.85
CLHC1-205ENST00000411884 BCANQ96GW7 911 aa9.72□□□□□ -0.85
CLHC1-205ENST00000411884 FOXK1P85037 733 aa9.71□□□□□ -0.86
CLHC1-205ENST00000411884 PPP1R15BQ5SWA1 713 aa9.71□□□□□ -0.86
CLHC1-205ENST00000411884 P3H3Q8IVL6 736 aa9.71□□□□□ -0.86
CLHC1-205ENST00000411884 CAMK2BQ13554 666 aa9.7□□□□□ -0.86
CLHC1-205ENST00000411884 C3orf67Q6ZVT6 689 aa9.7□□□□□ -0.86
CLHC1-205ENST00000411884 PLPP6Q8IY26 295 aa9.67□□□□□ -0.86
CLHC1-205ENST00000411884 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.66□□□□□ -0.86
CLHC1-205ENST00000411884 ARHGEF1Q92888 912 aaKnown RBP9.65□□□□□ -0.86
CLHC1-205ENST00000411884 NBR1Q14596 966 aa9.64□□□□□ -0.87
CLHC1-205ENST00000411884 EMILIN3Q9NT22 766 aa9.63□□□□□ -0.87
CLHC1-205ENST00000411884 ARIH1Q9Y4X5 557 aaPredicted RBP9.63□□□□□ -0.87
CLHC1-205ENST00000411884 MAMSTRQ6ZN01 415 aa9.58□□□□□ -0.88
CLHC1-205ENST00000411884 SCUBE2Q9NQ36 999 aa9.57□□□□□ -0.88
CLHC1-205ENST00000411884 DPYSL4O14531 572 aa9.56□□□□□ -0.88
CLHC1-205ENST00000411884 SLAIN1Q8ND83 568 aa9.55□□□□□ -0.88
CLHC1-205ENST00000411884 OXER1Q8TDS5 423 aa9.55□□□□□ -0.88
CLHC1-205ENST00000411884 SEMA3EO15041 775 aa9.53□□□□□ -0.88
CLHC1-205ENST00000411884 SLC34A2O95436 690 aa9.53□□□□□ -0.88
CLHC1-205ENST00000411884 LHX8Q68G74 356 aa9.53□□□□□ -0.88
CLHC1-205ENST00000411884 UPF1Q92900 1129 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLHC1-205ENST00000411884 OTUD5Q96G74 571 aa9.53□□□□□ -0.88
CLHC1-205ENST00000411884 PTCD2Q8WV60 388 aaKnown RBP9.52□□□□□ -0.89
CLHC1-205ENST00000411884 TESPA1A2RU30 521 aaPredicted RBP9.51□□□□□ -0.89
CLHC1-205ENST00000411884 PDIA6Q15084 440 aa9.51□□□□□ -0.89
CLHC1-205ENST00000411884 SPDYE16A6NNV3 312 aaPredicted RBP9.5□□□□□ -0.89
CLHC1-205ENST00000411884 HOXB3P14651 431 aaPredicted RBP9.5□□□□□ -0.89
CLHC1-205ENST00000411884 MAP3K9P80192 1104 aa9.5□□□□□ -0.89
CLHC1-205ENST00000411884 PCDHGA4Q9Y5G9 962 aa9.46□□□□□ -0.9
CLHC1-205ENST00000411884 MLLT3P42568 568 aaPredicted RBP9.45□□□□□ -0.9
CLHC1-205ENST00000411884 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLHC1-205ENST00000411884 TBC1D12O60347 775 aa9.44□□□□□ -0.9
CLHC1-205ENST00000411884 EVI5O60447 810 aa9.44□□□□□ -0.9
CLHC1-205ENST00000411884 DOK7Q18PE1 504 aa9.44□□□□□ -0.9
CLHC1-205ENST00000411884 KDM4FA0A1W2PPD8 638 aa9.43□□□□□ -0.9
CLHC1-205ENST00000411884 ANO8Q9HCE9 1232 aaPredicted RBP9.42□□□□□ -0.9
CLHC1-205ENST00000411884 PTGER2P43116 358 aa9.41□□□□□ -0.9
CLHC1-205ENST00000411884 LMOD2Q6P5Q4 547 aa9.41□□□□□ -0.9
CLHC1-205ENST00000411884 GPR153Q6NV75 609 aa9.4□□□□□ -0.9
CLHC1-205ENST00000411884 ZSWIM6Q9HCJ5 1215 aa9.4□□□□□ -0.9
CLHC1-205ENST00000411884 SNPHO15079 494 aa9.39□□□□□ -0.91
CLHC1-205ENST00000411884 ARSIQ5FYB1 569 aa9.39□□□□□ -0.91
CLHC1-205ENST00000411884 SMYD5Q6GMV2 418 aa9.39□□□□□ -0.91
CLHC1-205ENST00000411884 KHSRPQ92945 711 aaKnown RBP eCLIP9.39□□□□□ -0.911e-6■■□□□ 13.8
CLHC1-205ENST00000411884 TULP1O00294 542 aaPredicted RBP9.38□□□□□ -0.91
CLHC1-205ENST00000411884 RIMBP2O15034 1052 aa9.38□□□□□ -0.91
CLHC1-205ENST00000411884 PRKCSHP14314 528 aaPredicted RBP9.38□□□□□ -0.91
CLHC1-205ENST00000411884 TPRNQ4KMQ1 711 aa9.38□□□□□ -0.91
CLHC1-205ENST00000411884 GRXCR2A6NFK2 248 aa9.37□□□□□ -0.91
CLHC1-205ENST00000411884 ZNF710Q8N1W2 664 aa9.37□□□□□ -0.91
CLHC1-205ENST00000411884 DDX12PQ92771 950 aa9.37□□□□□ -0.91
CLHC1-205ENST00000411884 ZNF316A6NFI3 1004 aaPredicted RBP9.36□□□□□ -0.91
CLHC1-205ENST00000411884 NUDT7P0C024 238 aa9.35□□□□□ -0.91
CLHC1-205ENST00000411884 OSBPP22059 807 aa9.35□□□□□ -0.91
CLHC1-205ENST00000411884 RBM26Q5T8P6 1007 aaKnown RBP9.35□□□□□ -0.91
CLHC1-205ENST00000411884 PRIM1P49642 420 aaKnown RBP9.33□□□□□ -0.92
CLHC1-205ENST00000411884 HOXB1P14653 301 aaPredicted RBP9.32□□□□□ -0.92
CLHC1-205ENST00000411884 PCDHGA10Q9Y5H3 936 aa9.31□□□□□ -0.92
CLHC1-205ENST00000411884 PHF14O94880 888 aa9.3□□□□□ -0.92
CLHC1-205ENST00000411884 FOSBP53539 338 aa9.29□□□□□ -0.92
CLHC1-205ENST00000411884 ZC3H15Q8WU90 426 aaKnown RBP9.29□□□□□ -0.92
CLHC1-205ENST00000411884 JPH4Q96JJ6 628 aa9.29□□□□□ -0.92
CLHC1-205ENST00000411884 EPAS1Q99814 870 aa9.29□□□□□ -0.92
CLHC1-205ENST00000411884 LHX6Q9UPM6 363 aa9.29□□□□□ -0.92
CLHC1-205ENST00000411884 GPR37O15354 613 aa9.26□□□□□ -0.93
CLHC1-205ENST00000411884 ST18O60284 1047 aa9.26□□□□□ -0.93
CLHC1-205ENST00000411884 TYW1BQ6NUM6 668 aa9.26□□□□□ -0.93
CLHC1-205ENST00000411884 GPIHBP1Q8IV16 184 aa9.26□□□□□ -0.93
CLHC1-205ENST00000411884 EN1Q05925 392 aaPredicted RBP9.25□□□□□ -0.93
CLHC1-205ENST00000411884 ZNF454Q8N9F8 522 aa9.25□□□□□ -0.93
CLHC1-205ENST00000411884 NUTM2FA1L443 756 aa9.23□□□□□ -0.93
CLHC1-205ENST00000411884 ZMYND10O75800 440 aa9.23□□□□□ -0.93
CLHC1-205ENST00000411884 FBXW7Q969H0 707 aa9.23□□□□□ -0.93
CLHC1-205ENST00000411884 ZDHHC16Q969W1 377 aa9.23□□□□□ -0.93
CLHC1-205ENST00000411884 RBM33Q96EV2 1170 aaKnown RBP9.23□□□□□ -0.93
CLHC1-205ENST00000411884 ADAM33Q9BZ11 813 aa9.22□□□□□ -0.93
CLHC1-205ENST00000411884 MAP3K7O43318 606 aa9.21□□□□□ -0.94
CLHC1-205ENST00000411884 TSR1Q2NL82 804 aaKnown RBP9.21□□□□□ -0.94
CLHC1-205ENST00000411884 FAM163AQ96GL9 167 aaPredicted RBP9.21□□□□□ -0.94
CLHC1-205ENST00000411884 CDHR5Q9HBB8 845 aa9.21□□□□□ -0.94
CLHC1-205ENST00000411884 PSDA5PKW4 1024 aaPredicted RBP9.2□□□□□ -0.94
CLHC1-205ENST00000411884 LCE2DQ5TA82 110 aaPredicted RBP9.2□□□□□ -0.94
CLHC1-205ENST00000411884 BARGINQ6ZT62 677 aa9.2□□□□□ -0.94
CLHC1-205ENST00000411884 NPDC1Q9NQX5 325 aaPredicted RBP9.2□□□□□ -0.94
CLHC1-205ENST00000411884 PTGDRQ13258 359 aa9.19□□□□□ -0.94
CLHC1-205ENST00000411884 PPP4R3BQ5MIZ7 849 aa9.19□□□□□ -0.94
CLHC1-205ENST00000411884 C6orf132Q5T0Z8 1188 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms