RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 CFDP1Q9UEE9 299 aaPredicted RBP25.62■■□□□ 1.69
SSB-202ENST00000409333 CAMSAP2Q08AD1 1489 aa25.62■■□□□ 1.69
SSB-202ENST00000409333 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.61■■□□□ 1.69
SSB-202ENST00000409333 KIF13AQ9H1H9 1805 aa25.6■■□□□ 1.69
SSB-202ENST00000409333 SAMD9LQ8IVG5 1584 aa25.6■■□□□ 1.69
SSB-202ENST00000409333 PLCH2O75038 1416 aa25.59■■□□□ 1.69
SSB-202ENST00000409333 GLI2P10070 1586 aa25.59■■□□□ 1.69
SSB-202ENST00000409333 MAP3K4Q9Y6R4 1608 aa25.58■■□□□ 1.69
SSB-202ENST00000409333 ZNF644Q9H582 1327 aaPredicted RBP25.58■■□□□ 1.69
SSB-202ENST00000409333 ARAP3Q8WWN8 1544 aa25.58■■□□□ 1.69
SSB-202ENST00000409333 ZNF777Q9ULD5 760 aaPredicted RBP25.56■■□□□ 1.68
SSB-202ENST00000409333 DNMT1P26358 1616 aaKnown RBP25.55■■□□□ 1.68
SSB-202ENST00000409333 ITGAEP38570 1179 aa25.54■■□□□ 1.68
SSB-202ENST00000409333 CROCC2H7BZ55 1655 aa25.53■■□□□ 1.68
SSB-202ENST00000409333 TSPOAP1O95153 1857 aa25.52■■□□□ 1.68
SSB-202ENST00000409333 CD109Q6YHK3 1445 aa25.51■■□□□ 1.67
SSB-202ENST00000409333 FANCAO15360 1455 aa25.48■■□□□ 1.67
SSB-202ENST00000409333 SYCP2Q9BX26 1530 aa25.48■■□□□ 1.67
SSB-202ENST00000409333 ABCC1P33527 1531 aa25.48■■□□□ 1.67
SSB-202ENST00000409333 PTPRKQ15262 1439 aa25.47■■□□□ 1.67
SSB-202ENST00000409333 CFAP74Q9C0B2 1584 aa25.47■■□□□ 1.67
SSB-202ENST00000409333 PPRC1Q5VV67 1664 aaKnown RBP25.46■■□□□ 1.67
SSB-202ENST00000409333 ARHGEF5Q12774 1597 aa25.46■■□□□ 1.67
SSB-202ENST00000409333 DAPK1P53355 1430 aa25.46■■□□□ 1.67
SSB-202ENST00000409333 FAM69CQ0P6D2 419 aa25.46■■□□□ 1.67
SSB-202ENST00000409333 EFCAB2Q5VUJ9 269 aa25.45■■□□□ 1.66
SSB-202ENST00000409333 ABCC5O15440 1437 aa25.43■■□□□ 1.66
SSB-202ENST00000409333 MBD5Q9P267 1494 aa25.43■■□□□ 1.66
SSB-202ENST00000409333 PLEKHH2Q8IVE3 1493 aa25.42■■□□□ 1.66
SSB-202ENST00000409333 ADGBQ8N7X0 1667 aa25.42■■□□□ 1.66
SSB-202ENST00000409333 ARHGEF12Q9NZN5 1544 aa25.42■■□□□ 1.66
SSB-202ENST00000409333 HNRNPMP52272 730 aaKnown RBP eCLIP25.39■■□□□ 1.66
SSB-202ENST00000409333 KIAA1107Q9UPP5 1409 aa25.39■■□□□ 1.65
SSB-202ENST00000409333 CCDC141Q6ZP82 1450 aa25.38■■□□□ 1.65
SSB-202ENST00000409333 ADGRL1O94910 1474 aa25.37■■□□□ 1.65
SSB-202ENST00000409333 AKNAQ7Z591 1439 aa25.36■■□□□ 1.65
SSB-202ENST00000409333 GCC2Q8IWJ2 1684 aa25.34■■□□□ 1.65
SSB-202ENST00000409333 NEO1Q92859 1461 aa25.34■■□□□ 1.65
SSB-202ENST00000409333 SHANK2Q9UPX8 1470 aa25.34■■□□□ 1.65
SSB-202ENST00000409333 CHIC2Q9UKJ5 165 aa25.33■■□□□ 1.65
SSB-202ENST00000409333 TRAPPC8Q9Y2L5 1435 aa25.32■■□□□ 1.64
SSB-202ENST00000409333 MAST1Q9Y2H9 1570 aa25.3■■□□□ 1.64
SSB-202ENST00000409333 C9orf84Q5VXU9 1444 aa25.3■■□□□ 1.64
SSB-202ENST00000409333 SCAPERQ9BY12 1400 aa25.3■■□□□ 1.64
SSB-202ENST00000409333 ADGRL2O95490 1459 aa25.28■■□□□ 1.64
SSB-202ENST00000409333 TEX14Q8IWB6 1497 aa25.28■■□□□ 1.64
SSB-202ENST00000409333 HFM1A2PYH4 1435 aa25.27■■□□□ 1.64
SSB-202ENST00000409333 RSPH4AQ5TD94 716 aa25.27■■□□□ 1.64
SSB-202ENST00000409333 ROCK1Q13464 1354 aa25.26■■□□□ 1.63
SSB-202ENST00000409333 RICTORQ6R327 1708 aa25.26■■□□□ 1.63
SSB-202ENST00000409333 NAIPQ13075 1403 aa25.25■■□□□ 1.63
SSB-202ENST00000409333 SETD5Q9C0A6 1442 aa25.25■■□□□ 1.63
SSB-202ENST00000409333 RRP7BPQ9NSQ0 103 aa25.24■■□□□ 1.63
SSB-202ENST00000409333 TSPY4P0CV99 314 aa25.23■■□□□ 1.63
SSB-202ENST00000409333 TSPY10P0CW01 314 aa25.23■■□□□ 1.63
SSB-202ENST00000409333 INO80Q9ULG1 1556 aaPredicted RBP25.23■■□□□ 1.63
SSB-202ENST00000409333 NCOA1Q15788 1441 aa25.23■■□□□ 1.63
SSB-202ENST00000409333 POGZQ7Z3K3 1410 aa25.22■■□□□ 1.63
SSB-202ENST00000409333 PLXNC1O60486 1568 aa25.22■■□□□ 1.63
SSB-202ENST00000409333 ZFYVE16Q7Z3T8 1539 aa25.22■■□□□ 1.63
SSB-202ENST00000409333 KDM6BO15054 1643 aa25.22■■□□□ 1.63
SSB-202ENST00000409333 ZNF518AQ6AHZ1 1483 aa25.22■■□□□ 1.63
SSB-202ENST00000409333 AFAP1Q8N556 730 aa25.21■■□□□ 1.63
SSB-202ENST00000409333 RAB3GAP2Q9H2M9 1393 aa25.21■■□□□ 1.63
SSB-202ENST00000409333 KDM5CP41229 1560 aa25.21■■□□□ 1.63
SSB-202ENST00000409333 TRHP20396 242 aaPredicted RBP25.19■■□□□ 1.62
SSB-202ENST00000409333 ANKRD30AQ9BXX3 1397 aa25.19■■□□□ 1.62
SSB-202ENST00000409333 KIDINS220Q9ULH0 1771 aa25.18■■□□□ 1.62
SSB-202ENST00000409333 FRMPD1Q5SYB0 1578 aa25.18■■□□□ 1.62
SSB-202ENST00000409333 ATP7AQ04656 1500 aa25.18■■□□□ 1.62
SSB-202ENST00000409333 DENND4BO75064 1496 aaPredicted RBP25.18■■□□□ 1.62
SSB-202ENST00000409333 HECW2Q9P2P5 1572 aa25.16■■□□□ 1.62
SSB-202ENST00000409333 SPAG9O60271 1321 aaKnown RBP25.15■■□□□ 1.62
SSB-202ENST00000409333 RTEL1-TNFRSF6BF6WH68 1400 aa25.14■■□□□ 1.61
SSB-202ENST00000409333 RAPGEF3O95398 923 aa25.12■■□□□ 1.61
SSB-202ENST00000409333 KIF15Q9NS87 1388 aa25.12■■□□□ 1.61
SSB-202ENST00000409333 ABCA6Q8N139 1617 aa25.08■■□□□ 1.61
SSB-202ENST00000409333 MLH3Q9UHC1 1453 aa25.08■■□□□ 1.61
SSB-202ENST00000409333 ZMYM4Q5VZL5 1548 aa25.07■■□□□ 1.6
SSB-202ENST00000409333 COL17A1Q9UMD9 1497 aaPredicted RBP25.07■■□□□ 1.6
SSB-202ENST00000409333 DUOX2Q9NRD8 1548 aa25.07■■□□□ 1.6
SSB-202ENST00000409333 ANKRD50Q9ULJ7 1429 aa25.07■■□□□ 1.6
SSB-202ENST00000409333 MYT1LQ9UL68 1186 aa25.04■■□□□ 1.6
SSB-202ENST00000409333 HRCP23327 699 aa25.03■■□□□ 1.6
SSB-202ENST00000409333 DIP2CQ9Y2E4 1556 aa25.02■■□□□ 1.6
SSB-202ENST00000409333 ERBINQ96RT1 1412 aa24.99■■□□□ 1.59
SSB-202ENST00000409333 DHX57Q6P158 1386 aaKnown RBP24.98■■□□□ 1.59
SSB-202ENST00000409333 YEATS2Q9ULM3 1422 aa24.97■■□□□ 1.59
SSB-202ENST00000409333 EIF2AK4Q9P2K8 1649 aaKnown RBP24.97■■□□□ 1.59
SSB-202ENST00000409333 UNC13BO14795 1591 aa24.96■■□□□ 1.59
SSB-202ENST00000409333 CCER1Q8TC90 406 aaPredicted RBP24.95■■□□□ 1.59
SSB-202ENST00000409333 MAGI2Q86UL8 1455 aa24.94■■□□□ 1.58
SSB-202ENST00000409333 A2MP01023 1474 aa24.94■■□□□ 1.58
SSB-202ENST00000409333 DHX29Q7Z478 1369 aaKnown RBP24.92■■□□□ 1.58
SSB-202ENST00000409333 DEPDC5O75140 1603 aa24.92■■□□□ 1.58
SSB-202ENST00000409333 ARHGEF40Q8TER5 1519 aa24.91■■□□□ 1.58
SSB-202ENST00000409333 TRIM52Q96A61 297 aa24.91■■□□□ 1.58
SSB-202ENST00000409333 BCORL1Q5H9F3 1711 aa24.9■■□□□ 1.58
SSB-202ENST00000409333 KDM5DQ9BY66 1539 aa24.89■■□□□ 1.57
SSB-202ENST00000409333 SIGLEC1Q9BZZ2 1709 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms