RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 CCDC18Q5T9S5 1454 aa29.88■■■□□ 2.37
CUEDC1-202ENST00000407144 PDE4AP27815 886 aa29.87■■■□□ 2.37
CUEDC1-202ENST00000407144 DDRGK1Q96HY6 314 aa29.87■■■□□ 2.37
CUEDC1-202ENST00000407144 BACH2Q9BYV9 841 aa29.87■■■□□ 2.37
CUEDC1-202ENST00000407144 NCOA1Q15788 1441 aa29.87■■■□□ 2.37
CUEDC1-202ENST00000407144 EIF4G2P78344 907 aaKnown RBP eCLIP29.86■■■□□ 2.37
CUEDC1-202ENST00000407144 ABCA5Q8WWZ7 1642 aa29.86■■■□□ 2.37
CUEDC1-202ENST00000407144 NPM2Q86SE8 214 aaKnown RBP29.86■■■□□ 2.37
CUEDC1-202ENST00000407144 GLIPR1L2Q4G1C9 344 aa29.84■■■□□ 2.37
CUEDC1-202ENST00000407144 CCDC7Q96M83 1385 aa29.83■■■□□ 2.37
CUEDC1-202ENST00000407144 GAPVD1Q14C86 1478 aa29.82■■■□□ 2.36
CUEDC1-202ENST00000407144 HFM1A2PYH4 1435 aa29.81■■■□□ 2.36
CUEDC1-202ENST00000407144 PBRM1Q86U86 1689 aa29.79■■■□□ 2.36
CUEDC1-202ENST00000407144 FRAT1Q92837 279 aaPredicted RBP29.77■■■□□ 2.36
CUEDC1-202ENST00000407144 NFKBIBQ15653 356 aa29.77■■■□□ 2.36
CUEDC1-202ENST00000407144 PTPN23Q9H3S7 1636 aa29.75■■■□□ 2.35
CUEDC1-202ENST00000407144 GRIN2BQ13224 1484 aa29.73■■■□□ 2.35
CUEDC1-202ENST00000407144 SNAPC4Q5SXM2 1469 aa29.72■■■□□ 2.35
CUEDC1-202ENST00000407144 POLR1AO95602 1720 aaPredicted RBP29.7■■■□□ 2.34
CUEDC1-202ENST00000407144 CHD1O14646 1710 aa29.63■■■□□ 2.33
CUEDC1-202ENST00000407144 PCF11O94913 1555 aaKnown RBP29.63■■■□□ 2.33
CUEDC1-202ENST00000407144 FGD6Q6ZV73 1430 aa29.62■■■□□ 2.33
CUEDC1-202ENST00000407144 NAIPQ13075 1403 aa29.6■■■□□ 2.33
CUEDC1-202ENST00000407144 MAGI1Q96QZ7 1491 aaPredicted RBP29.6■■■□□ 2.33
CUEDC1-202ENST00000407144 FMN1Q68DA7 1419 aa29.59■■■□□ 2.33
CUEDC1-202ENST00000407144 FBLN2P98095 1184 aa29.58■■■□□ 2.33
CUEDC1-202ENST00000407144 RRP1P56182 461 aaKnown RBP29.57■■■□□ 2.32
CUEDC1-202ENST00000407144 ADAMTS12P58397 1594 aa29.55■■■□□ 2.32
CUEDC1-202ENST00000407144 FYCO1Q9BQS8 1478 aa29.54■■■□□ 2.32
CUEDC1-202ENST00000407144 PTPRKQ15262 1439 aa29.53■■■□□ 2.32
CUEDC1-202ENST00000407144 IGF1RP08069 1367 aa29.52■■■□□ 2.32
CUEDC1-202ENST00000407144 EXOC6Q8TAG9 804 aa29.52■■■□□ 2.32
CUEDC1-202ENST00000407144 ZMYND15Q9H091 742 aa29.52■■■□□ 2.32
CUEDC1-202ENST00000407144 SYNJ2O15056 1496 aa29.51■■■□□ 2.31
CUEDC1-202ENST00000407144 KIF7Q2M1P5 1343 aa29.51■■■□□ 2.31
CUEDC1-202ENST00000407144 HECW1Q76N89 1606 aa29.51■■■□□ 2.31
CUEDC1-202ENST00000407144 DCAF11Q8TEB1 546 aa29.49■■■□□ 2.31
CUEDC1-202ENST00000407144 SPATA31E1Q6ZUB1 1445 aa29.49■■■□□ 2.31
CUEDC1-202ENST00000407144 CHMP7Q8WUX9 453 aaPredicted RBP29.47■■■□□ 2.31
CUEDC1-202ENST00000407144 DHX29Q7Z478 1369 aaKnown RBP29.47■■■□□ 2.31
CUEDC1-202ENST00000407144 DAXXQ9UER7 740 aaPredicted RBP29.46■■■□□ 2.31
CUEDC1-202ENST00000407144 CASKIN1Q8WXD9 1431 aa29.44■■■□□ 2.3
CUEDC1-202ENST00000407144 VSIG10Q8N0Z9 540 aa29.43■■■□□ 2.3
CUEDC1-202ENST00000407144 PNISRQ8TF01 805 aaKnown RBP29.43■■■□□ 2.3
CUEDC1-202ENST00000407144 OSCARQ8IYS5 282 aa29.42■■■□□ 2.3
CUEDC1-202ENST00000407144 DENND4BO75064 1496 aaPredicted RBP29.42■■■□□ 2.3
CUEDC1-202ENST00000407144 GRIN2AQ12879 1464 aa29.4■■■□□ 2.3
CUEDC1-202ENST00000407144 RRP9O43818 475 aaKnown RBP29.39■■■□□ 2.3
CUEDC1-202ENST00000407144 CUL7Q14999 1698 aa29.38■■■□□ 2.29
CUEDC1-202ENST00000407144 L3MBTL2Q969R5 705 aa29.37■■■□□ 2.29
CUEDC1-202ENST00000407144 RCAN3Q9UKA8 241 aa29.37■■■□□ 2.29
CUEDC1-202ENST00000407144 LRPPRCP42704 1394 aaKnown RBP29.36■■■□□ 2.29
CUEDC1-202ENST00000407144 MIA2Q96PC5 1412 aa29.35■■■□□ 2.29
CUEDC1-202ENST00000407144 FRAT2O75474 233 aaPredicted RBP29.35■■■□□ 2.29
CUEDC1-202ENST00000407144 DNAJC5Q9H3Z4 198 aa29.35■■■□□ 2.29
CUEDC1-202ENST00000407144 RRAGDQ9NQL2 400 aaPredicted RBP29.35■■■□□ 2.29
CUEDC1-202ENST00000407144 CARMIL1Q5VZK9 1371 aa29.33■■■□□ 2.29
CUEDC1-202ENST00000407144 GCC2Q8IWJ2 1684 aa29.33■■■□□ 2.29
CUEDC1-202ENST00000407144 EFCAB5A4FU69 1503 aa29.31■■■□□ 2.28
CUEDC1-202ENST00000407144 L1TD1Q5T7N2 865 aaKnown RBP29.3■■■□□ 2.28
CUEDC1-202ENST00000407144 PDE3BQ13370 1112 aa29.3■■■□□ 2.28
CUEDC1-202ENST00000407144 HSP90AA2PQ14568 343 aaPredicted RBP29.3■■■□□ 2.28
CUEDC1-202ENST00000407144 CEP170Q5SW79 1584 aa29.3■■■□□ 2.28
CUEDC1-202ENST00000407144 ARID4BQ4LE39 1312 aaPredicted RBP29.29■■■□□ 2.28
CUEDC1-202ENST00000407144 SLC4A3P48751 1232 aa29.28■■■□□ 2.28
CUEDC1-202ENST00000407144 MYOM3Q5VTT5 1437 aa29.25■■■□□ 2.27
CUEDC1-202ENST00000407144 TMC1Q8TDI8 760 aa29.25■■■□□ 2.27
CUEDC1-202ENST00000407144 CLASP1Q7Z460 1538 aa29.23■■■□□ 2.27
CUEDC1-202ENST00000407144 NBPF8Q3BBV2 869 aa29.23■■■□□ 2.27
CUEDC1-202ENST00000407144 TEX14Q8IWB6 1497 aa29.23■■■□□ 2.27
CUEDC1-202ENST00000407144 NUP160Q12769 1436 aa29.23■■■□□ 2.27
CUEDC1-202ENST00000407144 HSP90AA1P07900 732 aaKnown RBP29.23■■■□□ 2.27
CUEDC1-202ENST00000407144 RPRD2Q5VT52 1461 aaKnown RBP29.23■■■□□ 2.27
CUEDC1-202ENST00000407144 ATP1B4Q9UN42 357 aaPredicted RBP29.21■■■□□ 2.27
CUEDC1-202ENST00000407144 BRD4O60885 1362 aaPredicted RBP29.21■■■□□ 2.27
CUEDC1-202ENST00000407144 KTN1Q86UP2 1357 aaKnown RBP29.2■■■□□ 2.27
CUEDC1-202ENST00000407144 FAM161AQ3B820 660 aa29.19■■■□□ 2.26
CUEDC1-202ENST00000407144 FHOD3Q2V2M9 1422 aa29.19■■■□□ 2.26
CUEDC1-202ENST00000407144 CLCN1P35523 988 aa29.19■■■□□ 2.26
CUEDC1-202ENST00000407144 ROCK2O75116 1388 aaKnown RBP29.17■■■□□ 2.26
CUEDC1-202ENST00000407144 MTUS2Q5JR59 1369 aa29.17■■■□□ 2.26
CUEDC1-202ENST00000407144 MPHOSPH9Q99550 1183 aa29.16■■■□□ 2.26
CUEDC1-202ENST00000407144 PNNQ9H307 717 aaKnown RBP29.16■■■□□ 2.26
CUEDC1-202ENST00000407144 PODXL2Q9NZ53 605 aa29.15■■■□□ 2.26
CUEDC1-202ENST00000407144 KDM2BQ8NHM5 1336 aa29.14■■■□□ 2.26
CUEDC1-202ENST00000407144 NAP1L5Q96NT1 182 aaPredicted RBP29.14■■■□□ 2.26
CUEDC1-202ENST00000407144 C8orf34Q49A92 452 aa29.12■■■□□ 2.25
CUEDC1-202ENST00000407144 ANKRD30BQ9BXX2 1392 aa29.11■■■□□ 2.25
CUEDC1-202ENST00000407144 SUPT6HQ7KZ85 1726 aaKnown RBP29.1■■■□□ 2.25
CUEDC1-202ENST00000407144 TCOF1Q13428 1488 aaKnown RBP29.09■■■□□ 2.25
CUEDC1-202ENST00000407144 BCORL1Q5H9F3 1711 aa29.09■■■□□ 2.25
CUEDC1-202ENST00000407144 CENPQQ7L2Z9 268 aaPredicted RBP29.09■■■□□ 2.25
CUEDC1-202ENST00000407144 P3H3Q8IVL6 736 aa29.09■■■□□ 2.25
CUEDC1-202ENST00000407144 KIF15Q9NS87 1388 aa29.09■■■□□ 2.25
CUEDC1-202ENST00000407144 POGKQ9P215 609 aa29.08■■■□□ 2.25
CUEDC1-202ENST00000407144 MYBBP1AQ9BQG0 1328 aaKnown RBP29.07■■■□□ 2.24
CUEDC1-202ENST00000407144 CRBNQ96SW2 442 aa29.06■■■□□ 2.24
CUEDC1-202ENST00000407144 RALBP1Q15311 655 aa29.05■■■□□ 2.24
CUEDC1-202ENST00000407144 ARHGEF11O15085 1522 aa29.04■■■□□ 2.24
CUEDC1-202ENST00000407144 KDM6BO15054 1643 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms