RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 FAM50AQ14320 339 aaKnown RBP31.2■■■□□ 2.58
CHKB-201ENST00000406938 ARHGAP5Q13017 1502 aa31.19■■■□□ 2.58
CHKB-201ENST00000406938 GLI2P10070 1586 aa31.19■■■□□ 2.58
CHKB-201ENST00000406938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.18■■■□□ 2.58
CHKB-201ENST00000406938 ARAP3Q8WWN8 1544 aa31.17■■■□□ 2.58
CHKB-201ENST00000406938 CAMSAP2Q08AD1 1489 aa31.16■■■□□ 2.58
CHKB-201ENST00000406938 ZNF644Q9H582 1327 aaPredicted RBP31.14■■■□□ 2.57
CHKB-201ENST00000406938 CD109Q6YHK3 1445 aa31.13■■■□□ 2.57
CHKB-201ENST00000406938 ZNF777Q9ULD5 760 aaPredicted RBP31.13■■■□□ 2.57
CHKB-201ENST00000406938 MAP3K4Q9Y6R4 1608 aa31.12■■■□□ 2.57
CHKB-201ENST00000406938 SAMD9LQ8IVG5 1584 aa31.11■■■□□ 2.57
CHKB-201ENST00000406938 FAM69CQ0P6D2 419 aa31.1■■■□□ 2.57
CHKB-201ENST00000406938 FANCAO15360 1455 aa31.06■■■□□ 2.56
CHKB-201ENST00000406938 EFCAB2Q5VUJ9 269 aa31.06■■■□□ 2.56
CHKB-201ENST00000406938 KIF13AQ9H1H9 1805 aa31.05■■■□□ 2.56
CHKB-201ENST00000406938 ITGAEP38570 1179 aa31.03■■■□□ 2.56
CHKB-201ENST00000406938 DNMT1P26358 1616 aaKnown RBP31■■■□□ 2.55
CHKB-201ENST00000406938 SYCP2Q9BX26 1530 aa31■■■□□ 2.55
CHKB-201ENST00000406938 PLEKHH2Q8IVE3 1493 aa31■■■□□ 2.55
CHKB-201ENST00000406938 ABCC1P33527 1531 aa31■■■□□ 2.55
CHKB-201ENST00000406938 CFAP74Q9C0B2 1584 aa30.98■■■□□ 2.55
CHKB-201ENST00000406938 DAPK1P53355 1430 aa30.97■■■□□ 2.55
CHKB-201ENST00000406938 KIAA1107Q9UPP5 1409 aa30.97■■■□□ 2.55
CHKB-201ENST00000406938 MBD5Q9P267 1494 aa30.96■■■□□ 2.55
CHKB-201ENST00000406938 PTPRKQ15262 1439 aa30.95■■■□□ 2.55
CHKB-201ENST00000406938 ABCC5O15440 1437 aa30.95■■■□□ 2.54
CHKB-201ENST00000406938 ARHGEF5Q12774 1597 aa30.95■■■□□ 2.54
CHKB-201ENST00000406938 ARHGEF12Q9NZN5 1544 aa30.94■■■□□ 2.54
CHKB-201ENST00000406938 HNRNPMP52272 730 aaKnown RBP eCLIP30.93■■■□□ 2.54
CHKB-201ENST00000406938 PPRC1Q5VV67 1664 aaKnown RBP30.93■■■□□ 2.54
CHKB-201ENST00000406938 AKNAQ7Z591 1439 aa30.92■■■□□ 2.54
CHKB-201ENST00000406938 ADGRL1O94910 1474 aa30.92■■■□□ 2.54
CHKB-201ENST00000406938 NEO1Q92859 1461 aa30.92■■■□□ 2.54
CHKB-201ENST00000406938 CROCC2H7BZ55 1655 aa30.91■■■□□ 2.54
CHKB-201ENST00000406938 CCDC141Q6ZP82 1450 aa30.9■■■□□ 2.54
CHKB-201ENST00000406938 TSPOAP1O95153 1857 aa30.9■■■□□ 2.54
CHKB-201ENST00000406938 TEX14Q8IWB6 1497 aa30.87■■■□□ 2.53
CHKB-201ENST00000406938 SCAPERQ9BY12 1400 aa30.85■■■□□ 2.53
CHKB-201ENST00000406938 SHANK2Q9UPX8 1470 aa30.85■■■□□ 2.53
CHKB-201ENST00000406938 TRAPPC8Q9Y2L5 1435 aa30.84■■■□□ 2.53
CHKB-201ENST00000406938 RSPH4AQ5TD94 716 aa30.83■■■□□ 2.53
CHKB-201ENST00000406938 TRHP20396 242 aaPredicted RBP30.82■■■□□ 2.52
CHKB-201ENST00000406938 CHIC2Q9UKJ5 165 aa30.82■■■□□ 2.52
CHKB-201ENST00000406938 C9orf84Q5VXU9 1444 aa30.8■■■□□ 2.52
CHKB-201ENST00000406938 ADGBQ8N7X0 1667 aa30.77■■■□□ 2.52
CHKB-201ENST00000406938 TSPY4P0CV99 314 aa30.76■■■□□ 2.52
CHKB-201ENST00000406938 TSPY10P0CW01 314 aa30.76■■■□□ 2.52
CHKB-201ENST00000406938 POGZQ7Z3K3 1410 aa30.76■■■□□ 2.52
CHKB-201ENST00000406938 ROCK1Q13464 1354 aa30.76■■■□□ 2.51
CHKB-201ENST00000406938 ADGRL2O95490 1459 aa30.76■■■□□ 2.51
CHKB-201ENST00000406938 MAST1Q9Y2H9 1570 aa30.75■■■□□ 2.51
CHKB-201ENST00000406938 ZNF518AQ6AHZ1 1483 aa30.75■■■□□ 2.51
CHKB-201ENST00000406938 HFM1A2PYH4 1435 aa30.74■■■□□ 2.51
CHKB-201ENST00000406938 AFAP1Q8N556 730 aa30.74■■■□□ 2.51
CHKB-201ENST00000406938 DENND4BO75064 1496 aaPredicted RBP30.73■■■□□ 2.51
CHKB-201ENST00000406938 RRP7BPQ9NSQ0 103 aa30.7■■■□□ 2.51
CHKB-201ENST00000406938 NAIPQ13075 1403 aa30.7■■■□□ 2.51
CHKB-201ENST00000406938 NCOA1Q15788 1441 aa30.7■■■□□ 2.51
CHKB-201ENST00000406938 KDM5CP41229 1560 aa30.7■■■□□ 2.5
CHKB-201ENST00000406938 ANKRD30AQ9BXX3 1397 aa30.7■■■□□ 2.5
CHKB-201ENST00000406938 ZFYVE16Q7Z3T8 1539 aa30.69■■■□□ 2.5
CHKB-201ENST00000406938 GCC2Q8IWJ2 1684 aa30.68■■■□□ 2.5
CHKB-201ENST00000406938 SETD5Q9C0A6 1442 aa30.68■■■□□ 2.5
CHKB-201ENST00000406938 INO80Q9ULG1 1556 aaPredicted RBP30.67■■■□□ 2.5
CHKB-201ENST00000406938 SPAG9O60271 1321 aaKnown RBP30.67■■■□□ 2.5
CHKB-201ENST00000406938 RICTORQ6R327 1708 aa30.66■■■□□ 2.5
CHKB-201ENST00000406938 PLXNC1O60486 1568 aa30.65■■■□□ 2.5
CHKB-201ENST00000406938 FRMPD1Q5SYB0 1578 aa30.65■■■□□ 2.5
CHKB-201ENST00000406938 RTEL1-TNFRSF6BF6WH68 1400 aa30.64■■■□□ 2.5
CHKB-201ENST00000406938 ATP7AQ04656 1500 aa30.64■■■□□ 2.5
CHKB-201ENST00000406938 RAPGEF3O95398 923 aa30.64■■■□□ 2.5
CHKB-201ENST00000406938 RAB3GAP2Q9H2M9 1393 aa30.63■■■□□ 2.49
CHKB-201ENST00000406938 KIF15Q9NS87 1388 aa30.62■■■□□ 2.49
CHKB-201ENST00000406938 HECW2Q9P2P5 1572 aa30.6■■■□□ 2.49
CHKB-201ENST00000406938 MLH3Q9UHC1 1453 aa30.58■■■□□ 2.49
CHKB-201ENST00000406938 COL17A1Q9UMD9 1497 aaPredicted RBP30.58■■■□□ 2.49
CHKB-201ENST00000406938 KIDINS220Q9ULH0 1771 aa30.57■■■□□ 2.48
CHKB-201ENST00000406938 KDM6BO15054 1643 aa30.56■■■□□ 2.48
CHKB-201ENST00000406938 ZMYM4Q5VZL5 1548 aa30.56■■■□□ 2.48
CHKB-201ENST00000406938 MYT1LQ9UL68 1186 aa30.54■■■□□ 2.48
CHKB-201ENST00000406938 ANKRD50Q9ULJ7 1429 aa30.52■■■□□ 2.48
CHKB-201ENST00000406938 DUOX2Q9NRD8 1548 aa30.51■■■□□ 2.47
CHKB-201ENST00000406938 ABCA6Q8N139 1617 aa30.48■■■□□ 2.47
CHKB-201ENST00000406938 HRCP23327 699 aa30.47■■■□□ 2.47
CHKB-201ENST00000406938 ERBINQ96RT1 1412 aa30.45■■■□□ 2.46
CHKB-201ENST00000406938 MAGI2Q86UL8 1455 aa30.45■■■□□ 2.46
CHKB-201ENST00000406938 DIP2CQ9Y2E4 1556 aa30.44■■■□□ 2.46
CHKB-201ENST00000406938 YEATS2Q9ULM3 1422 aa30.44■■■□□ 2.46
CHKB-201ENST00000406938 A2MP01023 1474 aa30.39■■■□□ 2.46
CHKB-201ENST00000406938 DHX29Q7Z478 1369 aaKnown RBP30.38■■■□□ 2.45
CHKB-201ENST00000406938 ARHGEF40Q8TER5 1519 aa30.36■■■□□ 2.45
CHKB-201ENST00000406938 EIF2AK4Q9P2K8 1649 aaKnown RBP30.33■■■□□ 2.45
CHKB-201ENST00000406938 DHX57Q6P158 1386 aaKnown RBP30.32■■■□□ 2.44
CHKB-201ENST00000406938 ACIN1Q9UKV3 1341 aaKnown RBP30.31■■■□□ 2.44
CHKB-201ENST00000406938 TRIM52Q96A61 297 aa30.31■■■□□ 2.44
CHKB-201ENST00000406938 UNC13BO14795 1591 aa30.3■■■□□ 2.44
CHKB-201ENST00000406938 ATP10AO60312 1499 aa30.3■■■□□ 2.44
CHKB-201ENST00000406938 CCER1Q8TC90 406 aaPredicted RBP30.27■■■□□ 2.44
CHKB-201ENST00000406938 REREQ9P2R6 1566 aa30.27■■■□□ 2.44
CHKB-201ENST00000406938 KDM5DQ9BY66 1539 aa30.25■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms