RNA–Protein interactions for RNA: ENST00000404603.5

SNRPD3-203, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 5

Gene SNRPD3, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-203ENST00000404603 SPINK5Q9NQ38 1064 aaPredicted RBP13.03□□□□□ -0.32
SNRPD3-203ENST00000404603 FAM69CQ0P6D2 419 aa13.02□□□□□ -0.33
SNRPD3-203ENST00000404603 TEX14Q8IWB6 1497 aa13.02□□□□□ -0.33
SNRPD3-203ENST00000404603 CAPN15O75808 1086 aa13.01□□□□□ -0.33
SNRPD3-203ENST00000404603 LRRIQ1Q96JM4 1722 aa13□□□□□ -0.33
SNRPD3-203ENST00000404603 ABCA9Q8IUA7 1624 aa13□□□□□ -0.33
SNRPD3-203ENST00000404603 LRRC9Q6ZRR7 1453 aa13□□□□□ -0.33
SNRPD3-203ENST00000404603 PHLDB1Q86UU1 1377 aa13□□□□□ -0.33
SNRPD3-203ENST00000404603 KCNH8Q96L42 1107 aa13□□□□□ -0.33
SNRPD3-203ENST00000404603 SUPT6HQ7KZ85 1726 aaKnown RBP12.99□□□□□ -0.33
SNRPD3-203ENST00000404603 CFAP74Q9C0B2 1584 aa12.99□□□□□ -0.33
SNRPD3-203ENST00000404603 ARAP3Q8WWN8 1544 aa12.98□□□□□ -0.33
SNRPD3-203ENST00000404603 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
SNRPD3-203ENST00000404603 CD109Q6YHK3 1445 aa12.97□□□□□ -0.33
SNRPD3-203ENST00000404603 MAP3K4Q9Y6R4 1608 aa12.97□□□□□ -0.33
SNRPD3-203ENST00000404603 MAGI3Q5TCQ9 1506 aa12.97□□□□□ -0.33
SNRPD3-203ENST00000404603 DSG3P32926 999 aa12.96□□□□□ -0.33
SNRPD3-203ENST00000404603 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.96□□□□□ -0.333e-6■■■■□ 23.4
SNRPD3-203ENST00000404603 ITSN2Q9NZM3 1697 aa12.96□□□□□ -0.34
SNRPD3-203ENST00000404603 CCNB3Q8WWL7 1395 aa12.95□□□□□ -0.34
SNRPD3-203ENST00000404603 MYO5CQ9NQX4 1742 aa12.94□□□□□ -0.34
SNRPD3-203ENST00000404603 NEO1Q92859 1461 aa12.93□□□□□ -0.34
SNRPD3-203ENST00000404603 PLCH2O75038 1416 aa12.93□□□□□ -0.34
SNRPD3-203ENST00000404603 TSPOAP1O95153 1857 aa12.92□□□□□ -0.34
SNRPD3-203ENST00000404603 NCOA2Q15596 1464 aa12.91□□□□□ -0.34
SNRPD3-203ENST00000404603 PLEKHH2Q8IVE3 1493 aa12.91□□□□□ -0.34
SNRPD3-203ENST00000404603 TTC37Q6PGP7 1564 aa12.91□□□□□ -0.34
SNRPD3-203ENST00000404603 EFCAB2Q5VUJ9 269 aa12.91□□□□□ -0.34
SNRPD3-203ENST00000404603 PREX2Q70Z35 1606 aa12.91□□□□□ -0.34
SNRPD3-203ENST00000404603 PPRC1Q5VV67 1664 aaKnown RBP12.9□□□□□ -0.34
SNRPD3-203ENST00000404603 ARHGAP5Q13017 1502 aa12.9□□□□□ -0.34
SNRPD3-203ENST00000404603 FANCAO15360 1455 aa12.9□□□□□ -0.34
SNRPD3-203ENST00000404603 MIA2Q96PC5 1412 aa12.89□□□□□ -0.35
SNRPD3-203ENST00000404603 CFDP1Q9UEE9 299 aaPredicted RBP12.88□□□□□ -0.35
SNRPD3-203ENST00000404603 MYOM3Q5VTT5 1437 aa12.88□□□□□ -0.35
SNRPD3-203ENST00000404603 GPATCH8Q9UKJ3 1502 aaKnown RBP12.87□□□□□ -0.35
SNRPD3-203ENST00000404603 KANK4Q5T7N3 995 aaPredicted RBP12.86□□□□□ -0.35
SNRPD3-203ENST00000404603 RSPH4AQ5TD94 716 aa12.86□□□□□ -0.35
SNRPD3-203ENST00000404603 CDC42BPAQ5VT25 1732 aa12.85□□□□□ -0.35
SNRPD3-203ENST00000404603 AKNAQ7Z591 1439 aa12.84□□□□□ -0.35
SNRPD3-203ENST00000404603 KIAA1107Q9UPP5 1409 aa12.84□□□□□ -0.35
SNRPD3-203ENST00000404603 ADGRL1O94910 1474 aa12.84□□□□□ -0.35
SNRPD3-203ENST00000404603 CDC42BPBQ9Y5S2 1711 aa12.82□□□□□ -0.36
SNRPD3-203ENST00000404603 KDM6BO15054 1643 aa12.82□□□□□ -0.36
SNRPD3-203ENST00000404603 ZNF518AQ6AHZ1 1483 aa12.82□□□□□ -0.36
SNRPD3-203ENST00000404603 DENND4BO75064 1496 aaPredicted RBP12.81□□□□□ -0.36
SNRPD3-203ENST00000404603 FGD6Q6ZV73 1430 aa12.8□□□□□ -0.36
SNRPD3-203ENST00000404603 ABCC1P33527 1531 aa12.8□□□□□ -0.36
SNRPD3-203ENST00000404603 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.8□□□□□ -0.36
SNRPD3-203ENST00000404603 CAMSAP2Q08AD1 1489 aa12.78□□□□□ -0.36
SNRPD3-203ENST00000404603 MAGI2Q86UL8 1455 aa12.78□□□□□ -0.36
SNRPD3-203ENST00000404603 COL17A1Q9UMD9 1497 aaPredicted RBP12.78□□□□□ -0.36
SNRPD3-203ENST00000404603 ZNF777Q9ULD5 760 aaPredicted RBP12.78□□□□□ -0.36
SNRPD3-203ENST00000404603 POGZQ7Z3K3 1410 aa12.78□□□□□ -0.36
SNRPD3-203ENST00000404603 SCAPERQ9BY12 1400 aa12.78□□□□□ -0.36
SNRPD3-203ENST00000404603 TCOF1Q13428 1488 aaKnown RBP12.77□□□□□ -0.37
SNRPD3-203ENST00000404603 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.37
SNRPD3-203ENST00000404603 PTPN23Q9H3S7 1636 aa12.77□□□□□ -0.37
SNRPD3-203ENST00000404603 ARHGEF5Q12774 1597 aa12.76□□□□□ -0.37
SNRPD3-203ENST00000404603 TSPY4P0CV99 314 aa12.75□□□□□ -0.37
SNRPD3-203ENST00000404603 TSPY10P0CW01 314 aa12.75□□□□□ -0.37
SNRPD3-203ENST00000404603 ZMYM4Q5VZL5 1548 aa12.75□□□□□ -0.37
SNRPD3-203ENST00000404603 CCDC141Q6ZP82 1450 aa12.75□□□□□ -0.37
SNRPD3-203ENST00000404603 SYCP2Q9BX26 1530 aa12.75□□□□□ -0.37
SNRPD3-203ENST00000404603 KDM5CP41229 1560 aa12.73□□□□□ -0.37
SNRPD3-203ENST00000404603 SHANK2Q9UPX8 1470 aa12.73□□□□□ -0.37
SNRPD3-203ENST00000404603 RRBP1Q9P2E9 1410 aaKnown RBP12.73□□□□□ -0.37
SNRPD3-203ENST00000404603 ZNF219Q9P2Y4 722 aaPredicted RBP12.73□□□□□ -0.37
SNRPD3-203ENST00000404603 RTEL1-TNFRSF6BF6WH68 1400 aa12.72□□□□□ -0.37
SNRPD3-203ENST00000404603 RICTORQ6R327 1708 aa12.72□□□□□ -0.37
SNRPD3-203ENST00000404603 HECW2Q9P2P5 1572 aa12.72□□□□□ -0.37
SNRPD3-203ENST00000404603 MLH3Q9UHC1 1453 aa12.72□□□□□ -0.37
SNRPD3-203ENST00000404603 ABCB7O75027 752 aa12.71□□□□□ -0.37
SNRPD3-203ENST00000404603 FAM50AQ14320 339 aaKnown RBP12.71□□□□□ -0.37
SNRPD3-203ENST00000404603 SPAG9O60271 1321 aaKnown RBP12.7□□□□□ -0.38
SNRPD3-203ENST00000404603 MYT1LQ9UL68 1186 aa12.7□□□□□ -0.38
SNRPD3-203ENST00000404603 MBD5Q9P267 1494 aa12.7□□□□□ -0.38
SNRPD3-203ENST00000404603 DNMT1P26358 1616 aaKnown RBP12.7□□□□□ -0.38
SNRPD3-203ENST00000404603 MAST1Q9Y2H9 1570 aa12.69□□□□□ -0.38
SNRPD3-203ENST00000404603 ZFYVE16Q7Z3T8 1539 aa12.68□□□□□ -0.38
SNRPD3-203ENST00000404603 HNRNPMP52272 730 aaKnown RBP eCLIP12.68□□□□□ -0.38
SNRPD3-203ENST00000404603 SAMD1Q6SPF0 538 aaPredicted RBP12.68□□□□□ -0.38
SNRPD3-203ENST00000404603 PPARGC1BQ86YN6 1023 aaKnown RBP12.68□□□□□ -0.38
SNRPD3-203ENST00000404603 DAPK1P53355 1430 aa12.68□□□□□ -0.38
SNRPD3-203ENST00000404603 ARHGEF40Q8TER5 1519 aa12.67□□□□□ -0.38
SNRPD3-203ENST00000404603 ACIN1Q9UKV3 1341 aaKnown RBP12.67□□□□□ -0.38
SNRPD3-203ENST00000404603 RAPGEF3O95398 923 aa12.67□□□□□ -0.38
SNRPD3-203ENST00000404603 C9orf84Q5VXU9 1444 aa12.67□□□□□ -0.38
SNRPD3-203ENST00000404603 TRAPPC8Q9Y2L5 1435 aa12.67□□□□□ -0.38
SNRPD3-203ENST00000404603 FRMPD1Q5SYB0 1578 aa12.67□□□□□ -0.38
SNRPD3-203ENST00000404603 ATP7AQ04656 1500 aa12.67□□□□□ -0.38
SNRPD3-203ENST00000404603 ARHGEF12Q9NZN5 1544 aa12.67□□□□□ -0.38
SNRPD3-203ENST00000404603 ZNF644Q9H582 1327 aaPredicted RBP12.66□□□□□ -0.38
SNRPD3-203ENST00000404603 INO80Q9ULG1 1556 aaPredicted RBP12.66□□□□□ -0.38
SNRPD3-203ENST00000404603 CROCC2H7BZ55 1655 aa12.66□□□□□ -0.38
SNRPD3-203ENST00000404603 ANKRD30AQ9BXX3 1397 aa12.66□□□□□ -0.38
SNRPD3-203ENST00000404603 AFAP1Q8N556 730 aa12.65□□□□□ -0.38
SNRPD3-203ENST00000404603 PLXNC1O60486 1568 aa12.64□□□□□ -0.39
SNRPD3-203ENST00000404603 REREQ9P2R6 1566 aa12.64□□□□□ -0.39
SNRPD3-203ENST00000404603 ROCK1Q13464 1354 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms