RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 PKD2Q13563 968 aa12.3□□□□□ -0.44
HPS4-203ENST00000402105 EXOC6Q8TAG9 804 aa12.3□□□□□ -0.44
HPS4-203ENST00000402105 POLA1P09884 1462 aaPredicted RBP12.3□□□□□ -0.44
HPS4-203ENST00000402105 RGL3Q3MIN7 710 aa12.29□□□□□ -0.44
HPS4-203ENST00000402105 PLIN1O60240 522 aa12.29□□□□□ -0.44
HPS4-203ENST00000402105 CFDP1Q9UEE9 299 aaPredicted RBP12.28□□□□□ -0.44
HPS4-203ENST00000402105 NEFMP07197 916 aa12.27□□□□□ -0.44
HPS4-203ENST00000402105 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.45
HPS4-203ENST00000402105 CFAP43Q8NDM7 1665 aa12.26□□□□□ -0.45
HPS4-203ENST00000402105 DCAF11Q8TEB1 546 aa12.26□□□□□ -0.45
HPS4-203ENST00000402105 CC2D1BQ5T0F9 858 aaKnown RBP12.26□□□□□ -0.45
HPS4-203ENST00000402105 ST20-MTHFSA0A0A6YYL1 179 aa12.25□□□□□ -0.45
HPS4-203ENST00000402105 NCOA1Q15788 1441 aa12.24□□□□□ -0.45
HPS4-203ENST00000402105 SLC4A3P48751 1232 aa12.24□□□□□ -0.45
HPS4-203ENST00000402105 TOPBP1Q92547 1522 aa12.24□□□□□ -0.45
HPS4-203ENST00000402105 USP47Q96K76 1375 aa12.24□□□□□ -0.45
HPS4-203ENST00000402105 DAXXQ9UER7 740 aaPredicted RBP12.24□□□□□ -0.45
HPS4-203ENST00000402105 IL27Q8NEV9 243 aa12.24□□□□□ -0.45
HPS4-203ENST00000402105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.23□□□□□ -0.456e-6■□□□□ 8.2
HPS4-203ENST00000402105 SNAPC4Q5SXM2 1469 aa12.23□□□□□ -0.45
HPS4-203ENST00000402105 CDCA7LQ96GN5 454 aa12.23□□□□□ -0.45
HPS4-203ENST00000402105 RCAN3Q9UKA8 241 aa12.23□□□□□ -0.45
HPS4-203ENST00000402105 EFCAB5A4FU69 1503 aa12.23□□□□□ -0.45
HPS4-203ENST00000402105 CDK13Q14004 1512 aaKnown RBP12.22□□□□□ -0.45
HPS4-203ENST00000402105 PNISRQ8TF01 805 aaKnown RBP12.22□□□□□ -0.45
HPS4-203ENST00000402105 ANO8Q9HCE9 1232 aaPredicted RBP12.22□□□□□ -0.45
HPS4-203ENST00000402105 CC2D2AQ9P2K1 1620 aa12.21□□□□□ -0.45
HPS4-203ENST00000402105 KDM6BO15054 1643 aa12.21□□□□□ -0.45
HPS4-203ENST00000402105 GAPVD1Q14C86 1478 aa12.21□□□□□ -0.46
HPS4-203ENST00000402105 ANKRD30BQ9BXX2 1392 aa12.21□□□□□ -0.46
HPS4-203ENST00000402105 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.2□□□□□ -0.46
HPS4-203ENST00000402105 PDE4AP27815 886 aa12.2□□□□□ -0.46
HPS4-203ENST00000402105 ABCA10Q8WWZ4 1543 aa12.2□□□□□ -0.46
HPS4-203ENST00000402105 KDM5BQ9UGL1 1544 aa12.2□□□□□ -0.46
HPS4-203ENST00000402105 RRP1P56182 461 aaKnown RBP12.19□□□□□ -0.46
HPS4-203ENST00000402105 DENND4BO75064 1496 aaPredicted RBP12.19□□□□□ -0.46
HPS4-203ENST00000402105 SMG6Q86US8 1419 aaKnown RBP12.18□□□□□ -0.46
HPS4-203ENST00000402105 MAGI3Q5TCQ9 1506 aa12.17□□□□□ -0.46
HPS4-203ENST00000402105 PDS5BQ9NTI5 1447 aa12.17□□□□□ -0.46
HPS4-203ENST00000402105 SUPT6HQ7KZ85 1726 aaKnown RBP12.17□□□□□ -0.46
HPS4-203ENST00000402105 GRIN2BQ13224 1484 aa12.16□□□□□ -0.46
HPS4-203ENST00000402105 NUP155O75694 1391 aa12.16□□□□□ -0.46
HPS4-203ENST00000402105 EHBP1L1Q8N3D4 1523 aa12.15□□□□□ -0.46
HPS4-203ENST00000402105 RGS3P49796 1198 aa12.15□□□□□ -0.46
HPS4-203ENST00000402105 TSPY4P0CV99 314 aa12.14□□□□□ -0.47
HPS4-203ENST00000402105 TSPY10P0CW01 314 aa12.14□□□□□ -0.47
HPS4-203ENST00000402105 DNMBPQ6XZF7 1577 aa12.14□□□□□ -0.47
HPS4-203ENST00000402105 CRBNQ96SW2 442 aa12.14□□□□□ -0.47
HPS4-203ENST00000402105 RPRD2Q5VT52 1461 aaKnown RBP12.13□□□□□ -0.47
HPS4-203ENST00000402105 DHX29Q7Z478 1369 aaKnown RBP12.13□□□□□ -0.47
HPS4-203ENST00000402105 EPRSP07814 1512 aaKnown RBP12.13□□□□□ -0.47
HPS4-203ENST00000402105 DAPK1P53355 1430 aa12.13□□□□□ -0.47
HPS4-203ENST00000402105 UGGT2Q9NYU1 1516 aa12.12□□□□□ -0.47
HPS4-203ENST00000402105 TCERG1O14776 1098 aaKnown RBP12.12□□□□□ -0.47
HPS4-203ENST00000402105 EIF5BO60841 1220 aaKnown RBP12.12□□□□□ -0.47
HPS4-203ENST00000402105 HNRNPMP52272 730 aaKnown RBP eCLIP12.12□□□□□ -0.47
HPS4-203ENST00000402105 MYBBP1AQ9BQG0 1328 aaKnown RBP12.12□□□□□ -0.47
HPS4-203ENST00000402105 ABCC5O15440 1437 aa12.12□□□□□ -0.47
HPS4-203ENST00000402105 ARXQ96QS3 562 aa12.12□□□□□ -0.47
HPS4-203ENST00000402105 NBPF1Q3BBV0 1214 aa12.11□□□□□ -0.47
HPS4-203ENST00000402105 URB2Q14146 1524 aaKnown RBP12.11□□□□□ -0.47
HPS4-203ENST00000402105 ROCK2O75116 1388 aaKnown RBP12.1□□□□□ -0.47
HPS4-203ENST00000402105 KIF15Q9NS87 1388 aa12.1□□□□□ -0.47
HPS4-203ENST00000402105 PRG4Q92954 1404 aaPredicted RBP12.09□□□□□ -0.47
HPS4-203ENST00000402105 C20orf194Q5TEA3 1177 aa12.09□□□□□ -0.47
HPS4-203ENST00000402105 CHMP7Q8WUX9 453 aaPredicted RBP12.09□□□□□ -0.47
HPS4-203ENST00000402105 THOC2Q8NI27 1593 aaKnown RBP12.09□□□□□ -0.47
HPS4-203ENST00000402105 RALBP1Q15311 655 aa12.09□□□□□ -0.47
HPS4-203ENST00000402105 ERCC6Q03468 1493 aa12.08□□□□□ -0.47
HPS4-203ENST00000402105 NLRP13Q86W25 1043 aa12.08□□□□□ -0.48
HPS4-203ENST00000402105 BACH2Q9BYV9 841 aa12.08□□□□□ -0.48
HPS4-203ENST00000402105 SPATA31E1Q6ZUB1 1445 aa12.08□□□□□ -0.48
HPS4-203ENST00000402105 PLEKHD1A6NEE1 506 aa12.08□□□□□ -0.48
HPS4-203ENST00000402105 PANK3Q9H999 370 aa12.08□□□□□ -0.48
HPS4-203ENST00000402105 CTTNBP2Q8WZ74 1663 aa12.08□□□□□ -0.48
HPS4-203ENST00000402105 BRPF3Q9ULD4 1205 aa12.07□□□□□ -0.48
HPS4-203ENST00000402105 KTN1Q86UP2 1357 aaKnown RBP12.07□□□□□ -0.48
HPS4-203ENST00000402105 MIA2Q96PC5 1412 aa12.07□□□□□ -0.48
HPS4-203ENST00000402105 TEX14Q8IWB6 1497 aa12.06□□□□□ -0.48
HPS4-203ENST00000402105 CUL7Q14999 1698 aa12.06□□□□□ -0.48
HPS4-203ENST00000402105 PRDM2Q13029 1718 aa12.05□□□□□ -0.48
HPS4-203ENST00000402105 WDR43Q15061 677 aaKnown RBP eCLIP12.05□□□□□ -0.48
HPS4-203ENST00000402105 CCDC146Q8IYE0 955 aa12.05□□□□□ -0.48
HPS4-203ENST00000402105 PPM1GO15355 546 aaPredicted RBP12.05□□□□□ -0.48
HPS4-203ENST00000402105 RNF123Q5XPI4 1314 aa12.05□□□□□ -0.48
HPS4-203ENST00000402105 ANKRD30AQ9BXX3 1397 aa12.04□□□□□ -0.48
HPS4-203ENST00000402105 LRRIQ1Q96JM4 1722 aa12.04□□□□□ -0.48
HPS4-203ENST00000402105 KIAA1107Q9UPP5 1409 aa12.03□□□□□ -0.48
HPS4-203ENST00000402105 ADAMTS8Q9UP79 889 aa12.03□□□□□ -0.48
HPS4-203ENST00000402105 TCOF1Q13428 1488 aaKnown RBP12.03□□□□□ -0.48
HPS4-203ENST00000402105 ANKRD50Q9ULJ7 1429 aa12.02□□□□□ -0.49
HPS4-203ENST00000402105 CANXP27824 592 aaKnown RBP12.02□□□□□ -0.49
HPS4-203ENST00000402105 NEUROD2Q15784 382 aa12.02□□□□□ -0.49
HPS4-203ENST00000402105 HECW1Q76N89 1606 aa12.02□□□□□ -0.49
HPS4-203ENST00000402105 DDRGK1Q96HY6 314 aa12.01□□□□□ -0.49
HPS4-203ENST00000402105 BRD4O60885 1362 aaPredicted RBP12.01□□□□□ -0.49
HPS4-203ENST00000402105 NFKBIBQ15653 356 aa12.01□□□□□ -0.49
HPS4-203ENST00000402105 ROCK1Q13464 1354 aa12□□□□□ -0.49
HPS4-203ENST00000402105 SENP3Q9H4L4 574 aaPredicted RBP12□□□□□ -0.49
HPS4-203ENST00000402105 SAMD9Q5K651 1589 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms