RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 PDS5BQ9NTI5 1447 aa14.53□□□□□ -0.08
PPP4R1-203ENST00000400556 KIF7Q2M1P5 1343 aa14.53□□□□□ -0.08
PPP4R1-203ENST00000400556 THOC2Q8NI27 1593 aaKnown RBP14.52□□□□□ -0.08
PPP4R1-203ENST00000400556 ERICH6Q7L0X2 663 aa14.52□□□□□ -0.09
PPP4R1-203ENST00000400556 FBLN2P98095 1184 aa14.49□□□□□ -0.09
PPP4R1-203ENST00000400556 BCL11AQ9H165 835 aa14.48□□□□□ -0.09
PPP4R1-203ENST00000400556 PPP4R2Q9NY27 417 aa14.48□□□□□ -0.09
PPP4R1-203ENST00000400556 KIF21AQ7Z4S6 1674 aa14.47□□□□□ -0.09
PPP4R1-203ENST00000400556 ARHGEF11O15085 1522 aa14.47□□□□□ -0.09
PPP4R1-203ENST00000400556 ANKRD30BQ9BXX2 1392 aa14.47□□□□□ -0.09
PPP4R1-203ENST00000400556 NCOA1Q15788 1441 aa14.46□□□□□ -0.09
PPP4R1-203ENST00000400556 KDM2AQ9Y2K7 1162 aa14.46□□□□□ -0.09
PPP4R1-203ENST00000400556 SALL2Q9Y467 1007 aaPredicted RBP14.46□□□□□ -0.09
PPP4R1-203ENST00000400556 TCOF1Q13428 1488 aaKnown RBP14.45□□□□□ -0.1
PPP4R1-203ENST00000400556 HECW1Q76N89 1606 aa14.45□□□□□ -0.1
PPP4R1-203ENST00000400556 DAPK1P53355 1430 aa14.45□□□□□ -0.1
PPP4R1-203ENST00000400556 CFDP1Q9UEE9 299 aaPredicted RBP14.44□□□□□ -0.1
PPP4R1-203ENST00000400556 IQGAP2Q13576 1575 aa14.44□□□□□ -0.1
PPP4R1-203ENST00000400556 ABCC5O15440 1437 aa14.44□□□□□ -0.1
PPP4R1-203ENST00000400556 AKNAQ7Z591 1439 aa14.44□□□□□ -0.1
PPP4R1-203ENST00000400556 GCC2Q8IWJ2 1684 aa14.43□□□□□ -0.1
PPP4R1-203ENST00000400556 PKD2Q13563 968 aa14.43□□□□□ -0.1
PPP4R1-203ENST00000400556 ZNF608Q9ULD9 1512 aaPredicted RBP14.42□□□□□ -0.1
PPP4R1-203ENST00000400556 ZBED9Q6R2W3 1325 aa14.42□□□□□ -0.1
PPP4R1-203ENST00000400556 PRG4Q92954 1404 aaPredicted RBP14.41□□□□□ -0.1
PPP4R1-203ENST00000400556 RPRD2Q5VT52 1461 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-203ENST00000400556 TARBP1Q13395 1621 aaKnown RBP14.41□□□□□ -0.1
PPP4R1-203ENST00000400556 MIA2Q96PC5 1412 aa14.4□□□□□ -0.1
PPP4R1-203ENST00000400556 WDR62O43379 1518 aa14.39□□□□□ -0.11
PPP4R1-203ENST00000400556 TEX14Q8IWB6 1497 aa14.39□□□□□ -0.11
PPP4R1-203ENST00000400556 FANCIQ9NVI1 1328 aa14.38□□□□□ -0.11
PPP4R1-203ENST00000400556 USP47Q96K76 1375 aa14.37□□□□□ -0.11
PPP4R1-203ENST00000400556 NBR1Q14596 966 aa14.36□□□□□ -0.11
PPP4R1-203ENST00000400556 NUP153P49790 1475 aaKnown RBP14.36□□□□□ -0.11
PPP4R1-203ENST00000400556 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
PPP4R1-203ENST00000400556 SPATA31E1Q6ZUB1 1445 aa14.36□□□□□ -0.11
PPP4R1-203ENST00000400556 TMC1Q8TDI8 760 aa14.35□□□□□ -0.11
PPP4R1-203ENST00000400556 CCDC136Q96JN2 1154 aa14.35□□□□□ -0.11
PPP4R1-203ENST00000400556 CARD11Q9BXL7 1154 aa14.35□□□□□ -0.11
PPP4R1-203ENST00000400556 ADAMTS12P58397 1594 aa14.33□□□□□ -0.11
PPP4R1-203ENST00000400556 PLB1Q6P1J6 1458 aa14.33□□□□□ -0.12
PPP4R1-203ENST00000400556 CHMP7Q8WUX9 453 aaPredicted RBP14.33□□□□□ -0.12
PPP4R1-203ENST00000400556 PZPP20742 1482 aa14.32□□□□□ -0.12
PPP4R1-203ENST00000400556 ST20-MTHFSA0A0A6YYL1 179 aa14.32□□□□□ -0.12
PPP4R1-203ENST00000400556 PAK3O75914 559 aaPredicted RBP14.32□□□□□ -0.12
PPP4R1-203ENST00000400556 DHX29Q7Z478 1369 aaKnown RBP14.32□□□□□ -0.12
PPP4R1-203ENST00000400556 DCAF11Q8TEB1 546 aa14.32□□□□□ -0.12
PPP4R1-203ENST00000400556 DISP1Q96F81 1524 aa14.32□□□□□ -0.12
PPP4R1-203ENST00000400556 ROCK1Q13464 1354 aa14.31□□□□□ -0.12
PPP4R1-203ENST00000400556 RGL3Q3MIN7 710 aa14.31□□□□□ -0.12
PPP4R1-203ENST00000400556 NUDCQ9Y266 331 aa14.31□□□□□ -0.12
PPP4R1-203ENST00000400556 NUP155O75694 1391 aa14.3□□□□□ -0.12
PPP4R1-203ENST00000400556 DNMT1P26358 1616 aaKnown RBP14.3□□□□□ -0.12
PPP4R1-203ENST00000400556 CAMSAP2Q08AD1 1489 aa14.3□□□□□ -0.12
PPP4R1-203ENST00000400556 HNRNPMP52272 730 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■■■■□ 23.5
PPP4R1-203ENST00000400556 BCORL1Q5H9F3 1711 aa14.29□□□□□ -0.12
PPP4R1-203ENST00000400556 ERICH6BQ5W0A0 696 aa14.29□□□□□ -0.12
PPP4R1-203ENST00000400556 NPM2Q86SE8 214 aaKnown RBP14.27□□□□□ -0.13
PPP4R1-203ENST00000400556 PNISRQ8TF01 805 aaKnown RBP14.27□□□□□ -0.13
PPP4R1-203ENST00000400556 KIAA0556O60303 1618 aa14.27□□□□□ -0.13
PPP4R1-203ENST00000400556 KIAA1107Q9UPP5 1409 aa14.27□□□□□ -0.13
PPP4R1-203ENST00000400556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.131e-6■■□□□ 12.6
PPP4R1-203ENST00000400556 KIF14Q15058 1648 aa14.26□□□□□ -0.13
PPP4R1-203ENST00000400556 KIAA0586Q9BVV6 1533 aa14.25□□□□□ -0.13
PPP4R1-203ENST00000400556 ANKRD50Q9ULJ7 1429 aa14.25□□□□□ -0.13
PPP4R1-203ENST00000400556 TROQ12816 1431 aaPredicted RBP14.25□□□□□ -0.13
PPP4R1-203ENST00000400556 MRC2Q9UBG0 1479 aa14.25□□□□□ -0.13
PPP4R1-203ENST00000400556 GPATCH8Q9UKJ3 1502 aaKnown RBP14.25□□□□□ -0.13
PPP4R1-203ENST00000400556 RAPGEF6Q8TEU7 1601 aa14.25□□□□□ -0.13
PPP4R1-203ENST00000400556 ANKRD30AQ9BXX3 1397 aa14.24□□□□□ -0.13
PPP4R1-203ENST00000400556 PLEKHD1A6NEE1 506 aa14.23□□□□□ -0.13
PPP4R1-203ENST00000400556 NOP58Q9Y2X3 529 aaKnown RBP14.23□□□□□ -0.13
PPP4R1-203ENST00000400556 SMG6Q86US8 1419 aaKnown RBP14.23□□□□□ -0.13
PPP4R1-203ENST00000400556 SKAP1Q86WV1 359 aa14.23□□□□□ -0.13
PPP4R1-203ENST00000400556 JPH4Q96JJ6 628 aa14.23□□□□□ -0.13
PPP4R1-203ENST00000400556 TSPY4P0CV99 314 aa14.23□□□□□ -0.13
PPP4R1-203ENST00000400556 TSPY10P0CW01 314 aa14.23□□□□□ -0.13
PPP4R1-203ENST00000400556 CC2D1BQ5T0F9 858 aaKnown RBP14.22□□□□□ -0.13
PPP4R1-203ENST00000400556 EXOC6Q8TAG9 804 aa14.22□□□□□ -0.13
PPP4R1-203ENST00000400556 NBPF1Q3BBV0 1214 aa14.22□□□□□ -0.13
PPP4R1-203ENST00000400556 GRIN2AQ12879 1464 aa14.21□□□□□ -0.13
PPP4R1-203ENST00000400556 DEKP35659 375 aaKnown RBP14.21□□□□□ -0.14
PPP4R1-203ENST00000400556 CDCA7LQ96GN5 454 aa14.21□□□□□ -0.14
PPP4R1-203ENST00000400556 PLIN1O60240 522 aa14.2□□□□□ -0.14
PPP4R1-203ENST00000400556 ROCK2O75116 1388 aaKnown RBP14.18□□□□□ -0.14
PPP4R1-203ENST00000400556 MBD5Q9P267 1494 aa14.18□□□□□ -0.14
PPP4R1-203ENST00000400556 ANP32AP39687 249 aaKnown RBP14.17□□□□□ -0.14
PPP4R1-203ENST00000400556 IFT140Q96RY7 1462 aa14.16□□□□□ -0.14
PPP4R1-203ENST00000400556 C9orf84Q5VXU9 1444 aa14.16□□□□□ -0.14
PPP4R1-203ENST00000400556 KDM5CP41229 1560 aa14.16□□□□□ -0.14
PPP4R1-203ENST00000400556 KIF15Q9NS87 1388 aa14.16□□□□□ -0.14
PPP4R1-203ENST00000400556 MYBBP1AQ9BQG0 1328 aaKnown RBP14.15□□□□□ -0.14
PPP4R1-203ENST00000400556 RRP1P56182 461 aaKnown RBP14.14□□□□□ -0.15
PPP4R1-203ENST00000400556 RCAN3Q9UKA8 241 aa14.14□□□□□ -0.15
PPP4R1-203ENST00000400556 EIF4G3O43432 1585 aaKnown RBP14.14□□□□□ -0.15
PPP4R1-203ENST00000400556 POLR1AO95602 1720 aaPredicted RBP14.13□□□□□ -0.15
PPP4R1-203ENST00000400556 RNF123Q5XPI4 1314 aa14.13□□□□□ -0.15
PPP4R1-203ENST00000400556 ZBTB47Q9UFB7 747 aaPredicted RBP14.13□□□□□ -0.15
PPP4R1-203ENST00000400556 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
PPP4R1-203ENST00000400556 CEP170Q5SW79 1584 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms