RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 ARAP3Q8WWN8 1544 aa24.81■■□□□ 1.56
TNRC18-202ENST00000399434 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.81■■□□□ 1.561e-6■■■■□ 19.9
TNRC18-202ENST00000399434 MAP3K4Q9Y6R4 1608 aa24.8■■□□□ 1.56
TNRC18-202ENST00000399434 CAMSAP2Q08AD1 1489 aa24.8■■□□□ 1.56
TNRC18-202ENST00000399434 KIF13AQ9H1H9 1805 aa24.79■■□□□ 1.56
TNRC18-202ENST00000399434 ARHGAP5Q13017 1502 aa24.78■■□□□ 1.56
TNRC18-202ENST00000399434 PLCH2O75038 1416 aa24.77■■□□□ 1.56
TNRC18-202ENST00000399434 DNMT1P26358 1616 aaKnown RBP24.74■■□□□ 1.55
TNRC18-202ENST00000399434 CFDP1Q9UEE9 299 aaPredicted RBP24.74■■□□□ 1.55
TNRC18-202ENST00000399434 ZNF644Q9H582 1327 aaPredicted RBP24.74■■□□□ 1.55
TNRC18-202ENST00000399434 FAM50AQ14320 339 aaKnown RBP24.73■■□□□ 1.55
TNRC18-202ENST00000399434 CROCC2H7BZ55 1655 aa24.73■■□□□ 1.55
TNRC18-202ENST00000399434 PPRC1Q5VV67 1664 aaKnown RBP24.7■■□□□ 1.54
TNRC18-202ENST00000399434 ABCC1P33527 1531 aa24.69■■□□□ 1.54
TNRC18-202ENST00000399434 PTPRKQ15262 1439 aa24.69■■□□□ 1.54
TNRC18-202ENST00000399434 ARHGEF5Q12774 1597 aa24.67■■□□□ 1.54
TNRC18-202ENST00000399434 SYCP2Q9BX26 1530 aa24.67■■□□□ 1.54
TNRC18-202ENST00000399434 CD109Q6YHK3 1445 aa24.67■■□□□ 1.54
TNRC18-202ENST00000399434 FANCAO15360 1455 aa24.66■■□□□ 1.54
TNRC18-202ENST00000399434 CFAP74Q9C0B2 1584 aa24.65■■□□□ 1.54
TNRC18-202ENST00000399434 ARHGEF12Q9NZN5 1544 aa24.65■■□□□ 1.54
TNRC18-202ENST00000399434 MBD5Q9P267 1494 aa24.65■■□□□ 1.54
TNRC18-202ENST00000399434 DAPK1P53355 1430 aa24.65■■□□□ 1.54
TNRC18-202ENST00000399434 ZNF777Q9ULD5 760 aaPredicted RBP24.64■■□□□ 1.53
TNRC18-202ENST00000399434 ABCC5O15440 1437 aa24.63■■□□□ 1.53
TNRC18-202ENST00000399434 TSPOAP1O95153 1857 aa24.62■■□□□ 1.53
TNRC18-202ENST00000399434 PLEKHH2Q8IVE3 1493 aa24.61■■□□□ 1.53
TNRC18-202ENST00000399434 ADGBQ8N7X0 1667 aa24.6■■□□□ 1.53
TNRC18-202ENST00000399434 ITGAEP38570 1179 aa24.6■■□□□ 1.53
TNRC18-202ENST00000399434 KIAA1107Q9UPP5 1409 aa24.59■■□□□ 1.53
TNRC18-202ENST00000399434 EFCAB2Q5VUJ9 269 aa24.59■■□□□ 1.53
TNRC18-202ENST00000399434 FAM69CQ0P6D2 419 aa24.58■■□□□ 1.53
TNRC18-202ENST00000399434 CCDC141Q6ZP82 1450 aa24.57■■□□□ 1.52
TNRC18-202ENST00000399434 SHANK2Q9UPX8 1470 aa24.57■■□□□ 1.52
TNRC18-202ENST00000399434 NEO1Q92859 1461 aa24.55■■□□□ 1.52
TNRC18-202ENST00000399434 GCC2Q8IWJ2 1684 aa24.55■■□□□ 1.52
TNRC18-202ENST00000399434 AKNAQ7Z591 1439 aa24.55■■□□□ 1.52
TNRC18-202ENST00000399434 ADGRL1O94910 1474 aa24.55■■□□□ 1.52
TNRC18-202ENST00000399434 MAST1Q9Y2H9 1570 aa24.54■■□□□ 1.52
TNRC18-202ENST00000399434 TRAPPC8Q9Y2L5 1435 aa24.53■■□□□ 1.52
TNRC18-202ENST00000399434 HNRNPMP52272 730 aaKnown RBP eCLIP24.52■■□□□ 1.522e-7■■■■□ 22.3
TNRC18-202ENST00000399434 ADGRL2O95490 1459 aa24.51■■□□□ 1.51
TNRC18-202ENST00000399434 C9orf84Q5VXU9 1444 aa24.49■■□□□ 1.51
TNRC18-202ENST00000399434 SCAPERQ9BY12 1400 aa24.48■■□□□ 1.51
TNRC18-202ENST00000399434 INO80Q9ULG1 1556 aaPredicted RBP24.47■■□□□ 1.51
TNRC18-202ENST00000399434 RICTORQ6R327 1708 aa24.47■■□□□ 1.51
TNRC18-202ENST00000399434 TEX14Q8IWB6 1497 aa24.46■■□□□ 1.51
TNRC18-202ENST00000399434 HFM1A2PYH4 1435 aa24.46■■□□□ 1.51
TNRC18-202ENST00000399434 FRMPD1Q5SYB0 1578 aa24.46■■□□□ 1.51
TNRC18-202ENST00000399434 ZFYVE16Q7Z3T8 1539 aa24.46■■□□□ 1.51
TNRC18-202ENST00000399434 NAIPQ13075 1403 aa24.46■■□□□ 1.51
TNRC18-202ENST00000399434 ROCK1Q13464 1354 aa24.46■■□□□ 1.51
TNRC18-202ENST00000399434 KDM5CP41229 1560 aa24.45■■□□□ 1.5
TNRC18-202ENST00000399434 POGZQ7Z3K3 1410 aa24.45■■□□□ 1.5
TNRC18-202ENST00000399434 KDM6BO15054 1643 aa24.44■■□□□ 1.5
TNRC18-202ENST00000399434 PLXNC1O60486 1568 aa24.44■■□□□ 1.5
TNRC18-202ENST00000399434 CHIC2Q9UKJ5 165 aa24.44■■□□□ 1.5
TNRC18-202ENST00000399434 NCOA1Q15788 1441 aa24.41■■□□□ 1.5
TNRC18-202ENST00000399434 SETD5Q9C0A6 1442 aa24.4■■□□□ 1.5
TNRC18-202ENST00000399434 ZNF518AQ6AHZ1 1483 aa24.4■■□□□ 1.5
TNRC18-202ENST00000399434 RSPH4AQ5TD94 716 aa24.39■■□□□ 1.5
TNRC18-202ENST00000399434 KIDINS220Q9ULH0 1771 aa24.39■■□□□ 1.49
TNRC18-202ENST00000399434 ATP7AQ04656 1500 aa24.38■■□□□ 1.49
TNRC18-202ENST00000399434 RAB3GAP2Q9H2M9 1393 aa24.37■■□□□ 1.49
TNRC18-202ENST00000399434 DENND4BO75064 1496 aaPredicted RBP24.37■■□□□ 1.49
TNRC18-202ENST00000399434 RRP7BPQ9NSQ0 103 aa24.37■■□□□ 1.49
TNRC18-202ENST00000399434 HECW2Q9P2P5 1572 aa24.37■■□□□ 1.49
TNRC18-202ENST00000399434 AFAP1Q8N556 730 aa24.36■■□□□ 1.49
TNRC18-202ENST00000399434 ANKRD30AQ9BXX3 1397 aa24.35■■□□□ 1.49
TNRC18-202ENST00000399434 TRHP20396 242 aaPredicted RBP24.35■■□□□ 1.49
TNRC18-202ENST00000399434 RTEL1-TNFRSF6BF6WH68 1400 aa24.34■■□□□ 1.49
TNRC18-202ENST00000399434 ZMYM4Q5VZL5 1548 aa24.33■■□□□ 1.49
TNRC18-202ENST00000399434 TSPY4P0CV99 314 aa24.32■■□□□ 1.48
TNRC18-202ENST00000399434 TSPY10P0CW01 314 aa24.32■■□□□ 1.48
TNRC18-202ENST00000399434 COL17A1Q9UMD9 1497 aaPredicted RBP24.32■■□□□ 1.48
TNRC18-202ENST00000399434 KIF15Q9NS87 1388 aa24.31■■□□□ 1.48
TNRC18-202ENST00000399434 ABCA6Q8N139 1617 aa24.31■■□□□ 1.48
TNRC18-202ENST00000399434 MLH3Q9UHC1 1453 aa24.3■■□□□ 1.48
TNRC18-202ENST00000399434 SPAG9O60271 1321 aaKnown RBP24.3■■□□□ 1.48
TNRC18-202ENST00000399434 RAPGEF3O95398 923 aa24.27■■□□□ 1.48
TNRC18-202ENST00000399434 DUOX2Q9NRD8 1548 aa24.27■■□□□ 1.48
TNRC18-202ENST00000399434 DIP2CQ9Y2E4 1556 aa24.26■■□□□ 1.47
TNRC18-202ENST00000399434 ANKRD50Q9ULJ7 1429 aa24.25■■□□□ 1.47
TNRC18-202ENST00000399434 HRCP23327 699 aa24.2■■□□□ 1.47
TNRC18-202ENST00000399434 UNC13BO14795 1591 aa24.2■■□□□ 1.46
TNRC18-202ENST00000399434 ERBINQ96RT1 1412 aa24.19■■□□□ 1.46
TNRC18-202ENST00000399434 YEATS2Q9ULM3 1422 aa24.19■■□□□ 1.46
TNRC18-202ENST00000399434 EIF2AK4Q9P2K8 1649 aaKnown RBP24.19■■□□□ 1.46
TNRC18-202ENST00000399434 DHX57Q6P158 1386 aaKnown RBP24.17■■□□□ 1.46
TNRC18-202ENST00000399434 ARHGEF40Q8TER5 1519 aa24.17■■□□□ 1.46
TNRC18-202ENST00000399434 DEPDC5O75140 1603 aa24.16■■□□□ 1.46
TNRC18-202ENST00000399434 MAGI2Q86UL8 1455 aa24.16■■□□□ 1.46
TNRC18-202ENST00000399434 BCORL1Q5H9F3 1711 aa24.15■■□□□ 1.46
TNRC18-202ENST00000399434 KDM5DQ9BY66 1539 aa24.15■■□□□ 1.46
TNRC18-202ENST00000399434 A2MP01023 1474 aa24.14■■□□□ 1.46
TNRC18-202ENST00000399434 SIGLEC1Q9BZZ2 1709 aa24.14■■□□□ 1.45
TNRC18-202ENST00000399434 MROH1Q8NDA8 1641 aa24.12■■□□□ 1.45
TNRC18-202ENST00000399434 PZPP20742 1482 aa24.11■■□□□ 1.45
TNRC18-202ENST00000399434 DHX29Q7Z478 1369 aaKnown RBP24.11■■□□□ 1.45
TNRC18-202ENST00000399434 REREQ9P2R6 1566 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms