RNA–Protein interactions for RNA: ENST00000398896.5

USP19-204, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP19, Length 3,907 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-204ENST00000398896 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
USP19-204ENST00000398896 CANXP27824 592 aaKnown RBP13.78□□□□□ -0.2
USP19-204ENST00000398896 P3H3Q8IVL6 736 aa13.76□□□□□ -0.21
USP19-204ENST00000398896 CUX2O14529 1486 aa13.76□□□□□ -0.21
USP19-204ENST00000398896 MAPKBP1O60336 1514 aa13.76□□□□□ -0.21
USP19-204ENST00000398896 FHAD1B1AJZ9 1412 aa13.75□□□□□ -0.21
USP19-204ENST00000398896 FAM13BQ9NYF5 915 aa13.75□□□□□ -0.21
USP19-204ENST00000398896 MSNP26038 577 aaKnown RBP13.73□□□□□ -0.21
USP19-204ENST00000398896 CDK11BP21127 795 aaKnown RBP13.72□□□□□ -0.21
USP19-204ENST00000398896 ESPNB1AK53 854 aa13.72□□□□□ -0.21
USP19-204ENST00000398896 PLIN1O60240 522 aa13.72□□□□□ -0.21
USP19-204ENST00000398896 PDE3BQ13370 1112 aa13.71□□□□□ -0.21
USP19-204ENST00000398896 CCDC7Q96M83 1385 aa13.71□□□□□ -0.21
USP19-204ENST00000398896 MRE11P49959 708 aa13.71□□□□□ -0.21
USP19-204ENST00000398896 AMER1Q5JTC6 1135 aaPredicted RBP13.71□□□□□ -0.21
USP19-204ENST00000398896 BAZ1AQ9NRL2 1556 aaPredicted RBP13.71□□□□□ -0.21
USP19-204ENST00000398896 CENPQQ7L2Z9 268 aaPredicted RBP13.71□□□□□ -0.21
USP19-204ENST00000398896 CRBNQ96SW2 442 aa13.71□□□□□ -0.21
USP19-204ENST00000398896 MAP7D2Q96T17 732 aa13.71□□□□□ -0.21
USP19-204ENST00000398896 ZHX1Q9UKY1 873 aaPredicted RBP13.7□□□□□ -0.22
USP19-204ENST00000398896 SPRYD3Q8NCJ5 442 aa13.69□□□□□ -0.22
USP19-204ENST00000398896 RNF123Q5XPI4 1314 aa13.69□□□□□ -0.22
USP19-204ENST00000398896 KIAA1211Q6ZU35 1233 aa13.68□□□□□ -0.22
USP19-204ENST00000398896 TAF7LQ5H9L4 462 aa13.68□□□□□ -0.22
USP19-204ENST00000398896 SKAP1Q86WV1 359 aa13.67□□□□□ -0.22
USP19-204ENST00000398896 CHIC2Q9UKJ5 165 aa13.67□□□□□ -0.22
USP19-204ENST00000398896 NAP1L2Q9ULW6 460 aaPredicted RBP13.67□□□□□ -0.22
USP19-204ENST00000398896 L3MBTL2Q969R5 705 aa13.66□□□□□ -0.22
USP19-204ENST00000398896 RRP7BPQ9NSQ0 103 aa13.66□□□□□ -0.22
USP19-204ENST00000398896 XRCC6P12956 609 aaKnown RBP eCLIP13.66□□□□□ -0.22
USP19-204ENST00000398896 KTN1Q86UP2 1357 aaKnown RBP13.65□□□□□ -0.22
USP19-204ENST00000398896 CHMP4BQ9H444 224 aaKnown RBP13.64□□□□□ -0.23
USP19-204ENST00000398896 KIF7Q2M1P5 1343 aa13.63□□□□□ -0.23
USP19-204ENST00000398896 PANK2Q9BZ23 570 aa13.63□□□□□ -0.23
USP19-204ENST00000398896 SMARCA2P51531 1590 aa13.63□□□□□ -0.23
USP19-204ENST00000398896 TOP2AP11388 1531 aaKnown RBP13.63□□□□□ -0.23
USP19-204ENST00000398896 PNISRQ8TF01 805 aaKnown RBP13.63□□□□□ -0.23
USP19-204ENST00000398896 PRDM10Q9NQV6 1147 aa13.62□□□□□ -0.23
USP19-204ENST00000398896 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.62□□□□□ -0.23
USP19-204ENST00000398896 CENPJQ9HC77 1338 aaPredicted RBP13.62□□□□□ -0.23
USP19-204ENST00000398896 ARAP1Q96P48 1450 aa13.61□□□□□ -0.23
USP19-204ENST00000398896 TRAK2O60296 914 aa13.61□□□□□ -0.23
USP19-204ENST00000398896 MTERF4Q7Z6M4 381 aaKnown RBP13.6□□□□□ -0.23
USP19-204ENST00000398896 GOLGA6L22H0YM25 854 aa13.6□□□□□ -0.23
USP19-204ENST00000398896 GRPEL1Q9HAV7 217 aa13.59□□□□□ -0.23
USP19-204ENST00000398896 PHLDB1Q86UU1 1377 aa13.59□□□□□ -0.23
USP19-204ENST00000398896 DDX11L8A8MPP1 907 aa13.58□□□□□ -0.23
USP19-204ENST00000398896 RALBP1Q15311 655 aa13.58□□□□□ -0.24
USP19-204ENST00000398896 PRDM4Q9UKN5 801 aa13.58□□□□□ -0.24
USP19-204ENST00000398896 PAXIP1Q6ZW49 1069 aaPredicted RBP13.58□□□□□ -0.24
USP19-204ENST00000398896 R3HCC1Q9Y3T6 440 aaKnown RBP13.58□□□□□ -0.24
USP19-204ENST00000398896 DNTTIP2Q5QJE6 756 aaKnown RBP13.57□□□□□ -0.24
USP19-204ENST00000398896 MCM4P33991 863 aa13.57□□□□□ -0.24
USP19-204ENST00000398896 ISY1Q9ULR0 285 aaKnown RBP13.57□□□□□ -0.24
USP19-204ENST00000398896 SMAP1Q8IYB5 467 aaPredicted RBP13.57□□□□□ -0.24
USP19-204ENST00000398896 MTUS2Q5JR59 1369 aa13.56□□□□□ -0.24
USP19-204ENST00000398896 ARHGAP35Q9NRY4 1499 aa13.56□□□□□ -0.24
USP19-204ENST00000398896 UACAQ9BZF9 1416 aa13.56□□□□□ -0.24
USP19-204ENST00000398896 CHMP5Q9NZZ3 219 aa13.56□□□□□ -0.24
USP19-204ENST00000398896 CCDC18Q5T9S5 1454 aa13.55□□□□□ -0.24
USP19-204ENST00000398896 FMN1Q68DA7 1419 aa13.55□□□□□ -0.24
USP19-204ENST00000398896 CDCA7LQ96GN5 454 aa13.55□□□□□ -0.24
USP19-204ENST00000398896 GBP4Q96PP9 640 aa13.55□□□□□ -0.24
USP19-204ENST00000398896 HSCBQ8IWL3 235 aa13.54□□□□□ -0.24
USP19-204ENST00000398896 MYBBP1AQ9BQG0 1328 aaKnown RBP13.53□□□□□ -0.24
USP19-204ENST00000398896 WDR43Q15061 677 aaKnown RBP eCLIP13.53□□□□□ -0.24
USP19-204ENST00000398896 FOXD1Q16676 465 aa13.53□□□□□ -0.24
USP19-204ENST00000398896 KIF27Q86VH2 1401 aa13.53□□□□□ -0.24
USP19-204ENST00000398896 NLRP13Q86W25 1043 aa13.53□□□□□ -0.24
USP19-204ENST00000398896 SLC4A1APQ9BWU0 796 aaKnown RBP13.53□□□□□ -0.24
USP19-204ENST00000398896 MPHOSPH9Q99550 1183 aa13.52□□□□□ -0.24
USP19-204ENST00000398896 EIF4G1Q04637 1599 aaKnown RBP13.52□□□□□ -0.24
USP19-204ENST00000398896 PTMSP20962 102 aa13.51□□□□□ -0.25
USP19-204ENST00000398896 PTMAP06454 111 aaKnown RBP13.51□□□□□ -0.25
USP19-204ENST00000398896 C8orf34Q49A92 452 aa13.51□□□□□ -0.25
USP19-204ENST00000398896 PLCD3Q8N3E9 789 aa13.51□□□□□ -0.25
USP19-204ENST00000398896 NCAPD3P42695 1498 aa13.51□□□□□ -0.25
USP19-204ENST00000398896 AEBP2Q6ZN18 517 aaPredicted RBP13.51□□□□□ -0.25
USP19-204ENST00000398896 MAPK8IP3Q9UPT6 1336 aa13.5□□□□□ -0.25
USP19-204ENST00000398896 SKOR2Q2VWA4 1001 aaPredicted RBP13.5□□□□□ -0.25
USP19-204ENST00000398896 NCOA1Q15788 1441 aa13.49□□□□□ -0.25
USP19-204ENST00000398896 KIF15Q9NS87 1388 aa13.49□□□□□ -0.25
USP19-204ENST00000398896 ZSCAN30Q86W11 494 aa13.49□□□□□ -0.25
USP19-204ENST00000398896 UQCRHLA0A096LP55 91 aa13.49□□□□□ -0.25
USP19-204ENST00000398896 UQCRHP07919 91 aa13.49□□□□□ -0.25
USP19-204ENST00000398896 HSP90AB1P08238 724 aaKnown RBP13.48□□□□□ -0.25
USP19-204ENST00000398896 CARD11Q9BXL7 1154 aa13.48□□□□□ -0.25
USP19-204ENST00000398896 LRRC9Q6ZRR7 1453 aa13.48□□□□□ -0.25
USP19-204ENST00000398896 CCDC173Q0VFZ6 552 aa13.48□□□□□ -0.25
USP19-204ENST00000398896 ROCK2O75116 1388 aaKnown RBP13.48□□□□□ -0.25
USP19-204ENST00000398896 IPO4Q8TEX9 1081 aaKnown RBP13.47□□□□□ -0.25
USP19-204ENST00000398896 CSPP1Q1MSJ5 1256 aa13.47□□□□□ -0.25
USP19-204ENST00000398896 NASPP49321 788 aaPredicted RBP13.47□□□□□ -0.25
USP19-204ENST00000398896 BRD4O60885 1362 aaPredicted RBP13.47□□□□□ -0.25
USP19-204ENST00000398896 VGLL3A8MV65 326 aa13.45□□□□□ -0.26
USP19-204ENST00000398896 GTF2E1P29083 439 aaPredicted RBP13.45□□□□□ -0.26
USP19-204ENST00000398896 PPP4R3BQ5MIZ7 849 aa13.45□□□□□ -0.26
USP19-204ENST00000398896 STAC3Q96MF2 364 aa13.45□□□□□ -0.26
USP19-204ENST00000398896 PEG3Q9GZU2 1588 aa13.45□□□□□ -0.26
USP19-204ENST00000398896 NCOA2Q15596 1464 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms