RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 NCOA2Q15596 1464 aa24.81■■□□□ 1.56
MBD1-207ENST00000398488 RAPGEF3O95398 923 aa24.81■■□□□ 1.56
MBD1-207ENST00000398488 EFCAB2Q5VUJ9 269 aa24.81■■□□□ 1.56
MBD1-207ENST00000398488 PHLDB1Q86UU1 1377 aa24.8■■□□□ 1.56
MBD1-207ENST00000398488 CCNB3Q8WWL7 1395 aa24.79■■□□□ 1.56
MBD1-207ENST00000398488 APLP2Q06481 763 aa24.78■■□□□ 1.56
MBD1-207ENST00000398488 SUPT6HQ7KZ85 1726 aaKnown RBP24.77■■□□□ 1.56
MBD1-207ENST00000398488 CFAP74Q9C0B2 1584 aa24.77■■□□□ 1.56
MBD1-207ENST00000398488 FRMPD1Q5SYB0 1578 aa24.76■■□□□ 1.55
MBD1-207ENST00000398488 SCAPERQ9BY12 1400 aa24.75■■□□□ 1.55
MBD1-207ENST00000398488 ADGRL1O94910 1474 aa24.75■■□□□ 1.55
MBD1-207ENST00000398488 ARHGEF12Q9NZN5 1544 aa24.73■■□□□ 1.55
MBD1-207ENST00000398488 DENND4BO75064 1496 aaPredicted RBP24.72■■□□□ 1.55
MBD1-207ENST00000398488 ZNF777Q9ULD5 760 aaPredicted RBP24.72■■□□□ 1.55
MBD1-207ENST00000398488 CFDP1Q9UEE9 299 aaPredicted RBP24.71■■□□□ 1.55
MBD1-207ENST00000398488 SAMD9LQ8IVG5 1584 aa24.71■■□□□ 1.55
MBD1-207ENST00000398488 ZNF644Q9H582 1327 aaPredicted RBP24.71■■□□□ 1.55
MBD1-207ENST00000398488 RICTORQ6R327 1708 aa24.71■■□□□ 1.55
MBD1-207ENST00000398488 ABCC1P33527 1531 aa24.67■■□□□ 1.54
MBD1-207ENST00000398488 PPARGC1BQ86YN6 1023 aaKnown RBP24.67■■□□□ 1.54
MBD1-207ENST00000398488 POGZQ7Z3K3 1410 aa24.66■■□□□ 1.54
MBD1-207ENST00000398488 TRAPPC8Q9Y2L5 1435 aa24.66■■□□□ 1.54
MBD1-207ENST00000398488 AFAP1Q8N556 730 aa24.66■■□□□ 1.54
MBD1-207ENST00000398488 ITSN2Q9NZM3 1697 aa24.65■■□□□ 1.54
MBD1-207ENST00000398488 HNRNPMP52272 730 aaKnown RBP eCLIP24.64■■□□□ 1.53
MBD1-207ENST00000398488 SYCP2Q9BX26 1530 aa24.62■■□□□ 1.53
MBD1-207ENST00000398488 MYOM3Q5VTT5 1437 aa24.6■■□□□ 1.53
MBD1-207ENST00000398488 ZMYM4Q5VZL5 1548 aa24.58■■□□□ 1.53
MBD1-207ENST00000398488 YEATS2Q9ULM3 1422 aa24.57■■□□□ 1.52
MBD1-207ENST00000398488 KIAA1107Q9UPP5 1409 aa24.57■■□□□ 1.52
MBD1-207ENST00000398488 CAMSAP2Q08AD1 1489 aa24.56■■□□□ 1.52
MBD1-207ENST00000398488 ZNF518AQ6AHZ1 1483 aa24.56■■□□□ 1.52
MBD1-207ENST00000398488 MBD5Q9P267 1494 aa24.56■■□□□ 1.52
MBD1-207ENST00000398488 KDM5CP41229 1560 aa24.56■■□□□ 1.52
MBD1-207ENST00000398488 PLEKHH2Q8IVE3 1493 aa24.53■■□□□ 1.52
MBD1-207ENST00000398488 MIA2Q96PC5 1412 aa24.51■■□□□ 1.51
MBD1-207ENST00000398488 ZFYVE16Q7Z3T8 1539 aa24.51■■□□□ 1.51
MBD1-207ENST00000398488 ARHGEF40Q8TER5 1519 aa24.51■■□□□ 1.51
MBD1-207ENST00000398488 MAGI2Q86UL8 1455 aa24.49■■□□□ 1.51
MBD1-207ENST00000398488 FGD6Q6ZV73 1430 aa24.49■■□□□ 1.51
MBD1-207ENST00000398488 MLH3Q9UHC1 1453 aa24.48■■□□□ 1.51
MBD1-207ENST00000398488 HECW2Q9P2P5 1572 aa24.47■■□□□ 1.51
MBD1-207ENST00000398488 SIGLEC1Q9BZZ2 1709 aa24.47■■□□□ 1.51
MBD1-207ENST00000398488 PTPN23Q9H3S7 1636 aa24.46■■□□□ 1.51
MBD1-207ENST00000398488 KIDINS220Q9ULH0 1771 aa24.46■■□□□ 1.51
MBD1-207ENST00000398488 SPAG9O60271 1321 aaKnown RBP24.44■■□□□ 1.5
MBD1-207ENST00000398488 MYT1LQ9UL68 1186 aa24.44■■□□□ 1.5
MBD1-207ENST00000398488 ABCA6Q8N139 1617 aa24.44■■□□□ 1.5
MBD1-207ENST00000398488 TCOF1Q13428 1488 aaKnown RBP24.43■■□□□ 1.5
MBD1-207ENST00000398488 DIP2CQ9Y2E4 1556 aa24.43■■□□□ 1.5
MBD1-207ENST00000398488 KDM4FA0A1W2PPD8 638 aa24.42■■□□□ 1.5
MBD1-207ENST00000398488 ATP10AO60312 1499 aa24.41■■□□□ 1.5
MBD1-207ENST00000398488 CCDC141Q6ZP82 1450 aa24.41■■□□□ 1.5
MBD1-207ENST00000398488 ARHGEF5Q12774 1597 aa24.41■■□□□ 1.5
MBD1-207ENST00000398488 INO80Q9ULG1 1556 aaPredicted RBP24.41■■□□□ 1.5
MBD1-207ENST00000398488 ATP7AQ04656 1500 aa24.39■■□□□ 1.49
MBD1-207ENST00000398488 ABCC5O15440 1437 aa24.36■■□□□ 1.49
MBD1-207ENST00000398488 C9orf84Q5VXU9 1444 aa24.36■■□□□ 1.49
MBD1-207ENST00000398488 RSPH4AQ5TD94 716 aa24.35■■□□□ 1.49
MBD1-207ENST00000398488 ARID4BQ4LE39 1312 aaPredicted RBP24.34■■□□□ 1.49
MBD1-207ENST00000398488 FAM50AQ14320 339 aaKnown RBP24.34■■□□□ 1.49
MBD1-207ENST00000398488 RTEL1-TNFRSF6BF6WH68 1400 aa24.33■■□□□ 1.48
MBD1-207ENST00000398488 DAPK1P53355 1430 aa24.31■■□□□ 1.48
MBD1-207ENST00000398488 TSPY4P0CV99 314 aa24.3■■□□□ 1.48
MBD1-207ENST00000398488 TSPY10P0CW01 314 aa24.3■■□□□ 1.48
MBD1-207ENST00000398488 DNMT1P26358 1616 aaKnown RBP24.3■■□□□ 1.48
MBD1-207ENST00000398488 REREQ9P2R6 1566 aa24.29■■□□□ 1.48
MBD1-207ENST00000398488 MAST1Q9Y2H9 1570 aa24.28■■□□□ 1.48
MBD1-207ENST00000398488 BCORL1Q5H9F3 1711 aa24.28■■□□□ 1.48
MBD1-207ENST00000398488 MLECQ14165 292 aa24.28■■□□□ 1.48
MBD1-207ENST00000398488 CROCC2H7BZ55 1655 aa24.27■■□□□ 1.48
MBD1-207ENST00000398488 A2MP01023 1474 aa24.26■■□□□ 1.47
MBD1-207ENST00000398488 ADGBQ8N7X0 1667 aa24.26■■□□□ 1.47
MBD1-207ENST00000398488 ADAMTSL3P82987 1691 aa24.25■■□□□ 1.47
MBD1-207ENST00000398488 PTPRKQ15262 1439 aa24.25■■□□□ 1.47
MBD1-207ENST00000398488 CHIC2Q9UKJ5 165 aa24.25■■□□□ 1.47
MBD1-207ENST00000398488 PLXNC1O60486 1568 aa24.24■■□□□ 1.47
MBD1-207ENST00000398488 AGLP35573 1532 aa24.23■■□□□ 1.47
MBD1-207ENST00000398488 RRBP1Q9P2E9 1410 aaKnown RBP24.23■■□□□ 1.47
MBD1-207ENST00000398488 SHANK2Q9UPX8 1470 aa24.22■■□□□ 1.47
MBD1-207ENST00000398488 DHX29Q7Z478 1369 aaKnown RBP24.21■■□□□ 1.47
MBD1-207ENST00000398488 MADDQ8WXG6 1647 aa24.19■■□□□ 1.46
MBD1-207ENST00000398488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.18■■□□□ 1.46
MBD1-207ENST00000398488 RRP7BPQ9NSQ0 103 aa24.18■■□□□ 1.46
MBD1-207ENST00000398488 ITGAEP38570 1179 aa24.17■■□□□ 1.46
MBD1-207ENST00000398488 KIF15Q9NS87 1388 aa24.14■■□□□ 1.46
MBD1-207ENST00000398488 NCOA1Q15788 1441 aa24.14■■□□□ 1.45
MBD1-207ENST00000398488 ADGRL2O95490 1459 aa24.12■■□□□ 1.45
MBD1-207ENST00000398488 RIMS1Q86UR5 1692 aaKnown RBP24.12■■□□□ 1.45
MBD1-207ENST00000398488 KIF3BO15066 747 aa24.11■■□□□ 1.45
MBD1-207ENST00000398488 GGT6Q6P531 493 aa24.1■■□□□ 1.45
MBD1-207ENST00000398488 ANKRD30AQ9BXX3 1397 aa24.1■■□□□ 1.45
MBD1-207ENST00000398488 PTPRMP28827 1452 aa24.1■■□□□ 1.45
MBD1-207ENST00000398488 FER1L4A9Z1Z3 1794 aa24.1■■□□□ 1.45
MBD1-207ENST00000398488 DUOX2Q9NRD8 1548 aa24.09■■□□□ 1.45
MBD1-207ENST00000398488 AEBP2Q6ZN18 517 aaPredicted RBP24.09■■□□□ 1.45
MBD1-207ENST00000398488 CEBPAP49715 358 aaPredicted RBP24.05■■□□□ 1.44
MBD1-207ENST00000398488 PLPPR3Q6T4P5 718 aa24.05■■□□□ 1.44
MBD1-207ENST00000398488 ROCK1Q13464 1354 aa24.02■■□□□ 1.44
MBD1-207ENST00000398488 MROH1Q8NDA8 1641 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms