RNA–Protein interactions for RNA: ENST00000398030.8

APEX1-202, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APEX1, Length 1,387 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-202ENST00000398030 PCGF6Q9BYE7 350 aa17.53■□□□□ 0.4
APEX1-202ENST00000398030 SENP3Q9H4L4 574 aaPredicted RBP17.53■□□□□ 0.4
APEX1-202ENST00000398030 CD109Q6YHK3 1445 aa17.52■□□□□ 0.4
APEX1-202ENST00000398030 FAM69CQ0P6D2 419 aa17.52■□□□□ 0.39
APEX1-202ENST00000398030 TCOF1Q13428 1488 aaKnown RBP17.51■□□□□ 0.39
APEX1-202ENST00000398030 GLI2P10070 1586 aa17.51■□□□□ 0.39
APEX1-202ENST00000398030 PREX2Q70Z35 1606 aa17.51■□□□□ 0.39
APEX1-202ENST00000398030 PTPN23Q9H3S7 1636 aa17.51■□□□□ 0.39
APEX1-202ENST00000398030 MYO5CQ9NQX4 1742 aa17.51■□□□□ 0.39
APEX1-202ENST00000398030 RSPH4AQ5TD94 716 aa17.51■□□□□ 0.39
APEX1-202ENST00000398030 CAMSAP2Q08AD1 1489 aa17.49■□□□□ 0.39
APEX1-202ENST00000398030 CFAP74Q9C0B2 1584 aa17.48■□□□□ 0.39
APEX1-202ENST00000398030 TEX14Q8IWB6 1497 aa17.47■□□□□ 0.39
APEX1-202ENST00000398030 FANCAO15360 1455 aa17.47■□□□□ 0.39
APEX1-202ENST00000398030 ITGAEP38570 1179 aa17.46■□□□□ 0.39
APEX1-202ENST00000398030 DIP2BQ9P265 1576 aa17.46■□□□□ 0.39
APEX1-202ENST00000398030 CDC42BPAQ5VT25 1732 aa17.45■□□□□ 0.38
APEX1-202ENST00000398030 TSPY4P0CV99 314 aa17.44■□□□□ 0.38
APEX1-202ENST00000398030 TSPY10P0CW01 314 aa17.44■□□□□ 0.38
APEX1-202ENST00000398030 KIAA1107Q9UPP5 1409 aa17.44■□□□□ 0.38
APEX1-202ENST00000398030 NEO1Q92859 1461 aa17.43■□□□□ 0.38
APEX1-202ENST00000398030 TRHP20396 242 aaPredicted RBP17.41■□□□□ 0.38
APEX1-202ENST00000398030 ADGRL1O94910 1474 aa17.4■□□□□ 0.38
APEX1-202ENST00000398030 CCDC141Q6ZP82 1450 aa17.4■□□□□ 0.38
APEX1-202ENST00000398030 DAPK1P53355 1430 aa17.4■□□□□ 0.38
APEX1-202ENST00000398030 AKNAQ7Z591 1439 aa17.39■□□□□ 0.37
APEX1-202ENST00000398030 MAP3K4Q9Y6R4 1608 aa17.39■□□□□ 0.37
APEX1-202ENST00000398030 ZNF644Q9H582 1327 aaPredicted RBP17.38■□□□□ 0.37
APEX1-202ENST00000398030 ACIN1Q9UKV3 1341 aaKnown RBP17.38■□□□□ 0.37
APEX1-202ENST00000398030 CDC42BPBQ9Y5S2 1711 aa17.38■□□□□ 0.37
APEX1-202ENST00000398030 ARHGEF5Q12774 1597 aa17.38■□□□□ 0.37
APEX1-202ENST00000398030 SAMD9LQ8IVG5 1584 aa17.38■□□□□ 0.37
APEX1-202ENST00000398030 SHANK2Q9UPX8 1470 aa17.37■□□□□ 0.37
APEX1-202ENST00000398030 DNMT1P26358 1616 aaKnown RBP17.37■□□□□ 0.37
APEX1-202ENST00000398030 ABCC1P33527 1531 aa17.37■□□□□ 0.37
APEX1-202ENST00000398030 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
APEX1-202ENST00000398030 MYT1LQ9UL68 1186 aa17.36■□□□□ 0.37
APEX1-202ENST00000398030 SCAPERQ9BY12 1400 aa17.36■□□□□ 0.37
APEX1-202ENST00000398030 ANKRD30AQ9BXX3 1397 aa17.35■□□□□ 0.37
APEX1-202ENST00000398030 HNRNPMP52272 730 aaKnown RBP eCLIP17.35■□□□□ 0.37
APEX1-202ENST00000398030 ABCC5O15440 1437 aa17.34■□□□□ 0.37
APEX1-202ENST00000398030 ROCK1Q13464 1354 aa17.33■□□□□ 0.37
APEX1-202ENST00000398030 ZNF518AQ6AHZ1 1483 aa17.33■□□□□ 0.36
APEX1-202ENST00000398030 C9orf84Q5VXU9 1444 aa17.32■□□□□ 0.36
APEX1-202ENST00000398030 DENND4BO75064 1496 aaPredicted RBP17.32■□□□□ 0.36
APEX1-202ENST00000398030 MBD5Q9P267 1494 aa17.31■□□□□ 0.36
APEX1-202ENST00000398030 CHIC2Q9UKJ5 165 aa17.31■□□□□ 0.36
APEX1-202ENST00000398030 SPAG9O60271 1321 aaKnown RBP17.31■□□□□ 0.36
APEX1-202ENST00000398030 HFM1A2PYH4 1435 aa17.28■□□□□ 0.36
APEX1-202ENST00000398030 POGZQ7Z3K3 1410 aa17.28■□□□□ 0.36
APEX1-202ENST00000398030 RTEL1-TNFRSF6BF6WH68 1400 aa17.27■□□□□ 0.36
APEX1-202ENST00000398030 SETD5Q9C0A6 1442 aa17.27■□□□□ 0.36
APEX1-202ENST00000398030 ADGRL2O95490 1459 aa17.27■□□□□ 0.36
APEX1-202ENST00000398030 CROCC2H7BZ55 1655 aa17.26■□□□□ 0.35
APEX1-202ENST00000398030 MAST1Q9Y2H9 1570 aa17.26■□□□□ 0.35
APEX1-202ENST00000398030 KIF13AQ9H1H9 1805 aa17.25■□□□□ 0.35
APEX1-202ENST00000398030 TRAPPC8Q9Y2L5 1435 aa17.25■□□□□ 0.35
APEX1-202ENST00000398030 ADGBQ8N7X0 1667 aa17.24■□□□□ 0.35
APEX1-202ENST00000398030 RRP7BPQ9NSQ0 103 aa17.24■□□□□ 0.35
APEX1-202ENST00000398030 ARHGEF12Q9NZN5 1544 aa17.23■□□□□ 0.35
APEX1-202ENST00000398030 PTPRKQ15262 1439 aa17.23■□□□□ 0.35
APEX1-202ENST00000398030 KIF15Q9NS87 1388 aa17.23■□□□□ 0.35
APEX1-202ENST00000398030 HRCP23327 699 aa17.23■□□□□ 0.35
APEX1-202ENST00000398030 AFAP1Q8N556 730 aa17.23■□□□□ 0.35
APEX1-202ENST00000398030 NCOA1Q15788 1441 aa17.22■□□□□ 0.35
APEX1-202ENST00000398030 PHF23Q9BUL5 403 aaPredicted RBP17.21■□□□□ 0.35
APEX1-202ENST00000398030 TSPOAP1O95153 1857 aa17.21■□□□□ 0.35
APEX1-202ENST00000398030 ATP7AQ04656 1500 aa17.2■□□□□ 0.34
APEX1-202ENST00000398030 NAIPQ13075 1403 aa17.2■□□□□ 0.34
APEX1-202ENST00000398030 PLXNC1O60486 1568 aa17.2■□□□□ 0.34
APEX1-202ENST00000398030 MAGI2Q86UL8 1455 aa17.19■□□□□ 0.34
APEX1-202ENST00000398030 MLH3Q9UHC1 1453 aa17.19■□□□□ 0.34
APEX1-202ENST00000398030 KDM5CP41229 1560 aa17.19■□□□□ 0.34
APEX1-202ENST00000398030 RAB3GAP2Q9H2M9 1393 aa17.19■□□□□ 0.34
APEX1-202ENST00000398030 HECW2Q9P2P5 1572 aa17.18■□□□□ 0.34
APEX1-202ENST00000398030 ANKRD50Q9ULJ7 1429 aa17.18■□□□□ 0.34
APEX1-202ENST00000398030 ZFYVE16Q7Z3T8 1539 aa17.18■□□□□ 0.34
APEX1-202ENST00000398030 DUOX2Q9NRD8 1548 aa17.18■□□□□ 0.34
APEX1-202ENST00000398030 RAPGEF3O95398 923 aa17.17■□□□□ 0.34
APEX1-202ENST00000398030 PPRC1Q5VV67 1664 aaKnown RBP17.17■□□□□ 0.34
APEX1-202ENST00000398030 GCC2Q8IWJ2 1684 aa17.17■□□□□ 0.34
APEX1-202ENST00000398030 ERBINQ96RT1 1412 aa17.17■□□□□ 0.34
APEX1-202ENST00000398030 INO80Q9ULG1 1556 aaPredicted RBP17.15■□□□□ 0.34
APEX1-202ENST00000398030 ZMYM4Q5VZL5 1548 aa17.14■□□□□ 0.33
APEX1-202ENST00000398030 TRIM52Q96A61 297 aa17.14■□□□□ 0.33
APEX1-202ENST00000398030 CCER1Q8TC90 406 aaPredicted RBP17.12■□□□□ 0.33
APEX1-202ENST00000398030 DHX29Q7Z478 1369 aaKnown RBP17.11■□□□□ 0.33
APEX1-202ENST00000398030 KDM6BO15054 1643 aa17.1■□□□□ 0.33
APEX1-202ENST00000398030 RICTORQ6R327 1708 aa17.1■□□□□ 0.33
APEX1-202ENST00000398030 A2MP01023 1474 aa17.1■□□□□ 0.33
APEX1-202ENST00000398030 KANK1Q14678 1352 aa17.09■□□□□ 0.33
APEX1-202ENST00000398030 FRMPD1Q5SYB0 1578 aa17.07■□□□□ 0.32
APEX1-202ENST00000398030 ATP10AO60312 1499 aa17.06■□□□□ 0.32
APEX1-202ENST00000398030 EIF2AK4Q9P2K8 1649 aaKnown RBP17.05■□□□□ 0.32
APEX1-202ENST00000398030 KIDINS220Q9ULH0 1771 aa17.04■□□□□ 0.32
APEX1-202ENST00000398030 CLSPNQ9HAW4 1339 aa17.04■□□□□ 0.32
APEX1-202ENST00000398030 KIF3BO15066 747 aa17.03■□□□□ 0.32
APEX1-202ENST00000398030 NUP155O75694 1391 aa17.03■□□□□ 0.32
APEX1-202ENST00000398030 ARHGEF40Q8TER5 1519 aa17.03■□□□□ 0.32
APEX1-202ENST00000398030 DIP2CQ9Y2E4 1556 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms