RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 CUL7Q14999 1698 aa18.79■□□□□ 0.6
COL6A2-203ENST00000397763 DEKP35659 375 aaKnown RBP18.78■□□□□ 0.6
COL6A2-203ENST00000397763 SALL2Q9Y467 1007 aaPredicted RBP18.78■□□□□ 0.6
COL6A2-203ENST00000397763 AKNAQ7Z591 1439 aa18.77■□□□□ 0.59
COL6A2-203ENST00000397763 UGGT2Q9NYU1 1516 aa18.76■□□□□ 0.59
COL6A2-203ENST00000397763 EHBP1L1Q8N3D4 1523 aa18.75■□□□□ 0.59
COL6A2-203ENST00000397763 ZBED9Q6R2W3 1325 aa18.73■□□□□ 0.59
COL6A2-203ENST00000397763 NCOA1Q15788 1441 aa18.73■□□□□ 0.59
COL6A2-203ENST00000397763 SAMD9Q5K651 1589 aa18.73■□□□□ 0.59
COL6A2-203ENST00000397763 PAK3O75914 559 aaPredicted RBP18.72■□□□□ 0.59
COL6A2-203ENST00000397763 KDM2AQ9Y2K7 1162 aa18.7■□□□□ 0.58
COL6A2-203ENST00000397763 ANKRD30BQ9BXX2 1392 aa18.7■□□□□ 0.58
COL6A2-203ENST00000397763 EPRSP07814 1512 aaKnown RBP18.7■□□□□ 0.58
COL6A2-203ENST00000397763 CCDC136Q96JN2 1154 aa18.68■□□□□ 0.58
COL6A2-203ENST00000397763 THOC2Q8NI27 1593 aaKnown RBP18.68■□□□□ 0.58
COL6A2-203ENST00000397763 PDS5BQ9NTI5 1447 aa18.66■□□□□ 0.58
COL6A2-203ENST00000397763 LAMC3Q9Y6N6 1575 aa18.65■□□□□ 0.58
COL6A2-203ENST00000397763 PKD2Q13563 968 aa18.64■□□□□ 0.57
COL6A2-203ENST00000397763 ARHGEF11O15085 1522 aa18.63■□□□□ 0.57
COL6A2-203ENST00000397763 ABCA5Q8WWZ7 1642 aa18.63■□□□□ 0.57
COL6A2-203ENST00000397763 HECW1Q76N89 1606 aa18.62■□□□□ 0.57
COL6A2-203ENST00000397763 TCOF1Q13428 1488 aaKnown RBP18.62■□□□□ 0.57
COL6A2-203ENST00000397763 TMC1Q8TDI8 760 aa18.62■□□□□ 0.57
COL6A2-203ENST00000397763 ABCC5O15440 1437 aa18.62■□□□□ 0.57
COL6A2-203ENST00000397763 DAPK1P53355 1430 aa18.62■□□□□ 0.57
COL6A2-203ENST00000397763 NOP58Q9Y2X3 529 aaKnown RBP18.62■□□□□ 0.57
COL6A2-203ENST00000397763 RPRD2Q5VT52 1461 aaKnown RBP18.61■□□□□ 0.57
COL6A2-203ENST00000397763 NPM2Q86SE8 214 aaKnown RBP18.61■□□□□ 0.57
COL6A2-203ENST00000397763 ERICH6BQ5W0A0 696 aa18.61■□□□□ 0.57
COL6A2-203ENST00000397763 CFDP1Q9UEE9 299 aaPredicted RBP18.61■□□□□ 0.57
COL6A2-203ENST00000397763 FBLN2P98095 1184 aa18.6■□□□□ 0.57
COL6A2-203ENST00000397763 GCC2Q8IWJ2 1684 aa18.59■□□□□ 0.57
COL6A2-203ENST00000397763 TEX14Q8IWB6 1497 aa18.59■□□□□ 0.57
COL6A2-203ENST00000397763 USP47Q96K76 1375 aa18.59■□□□□ 0.57
COL6A2-203ENST00000397763 NUDCQ9Y266 331 aa18.59■□□□□ 0.57
COL6A2-203ENST00000397763 SPATA31E1Q6ZUB1 1445 aa18.58■□□□□ 0.57
COL6A2-203ENST00000397763 DHX29Q7Z478 1369 aaKnown RBP18.56■□□□□ 0.56
COL6A2-203ENST00000397763 CARD11Q9BXL7 1154 aa18.56■□□□□ 0.56
COL6A2-203ENST00000397763 MIA2Q96PC5 1412 aa18.56■□□□□ 0.56
COL6A2-203ENST00000397763 PRG4Q92954 1404 aaPredicted RBP18.55■□□□□ 0.56
COL6A2-203ENST00000397763 ST20-MTHFSA0A0A6YYL1 179 aa18.54■□□□□ 0.56
COL6A2-203ENST00000397763 SKAP1Q86WV1 359 aa18.53■□□□□ 0.56
COL6A2-203ENST00000397763 IQGAP2Q13576 1575 aa18.53■□□□□ 0.56
COL6A2-203ENST00000397763 PNISRQ8TF01 805 aaKnown RBP18.52■□□□□ 0.56
COL6A2-203ENST00000397763 RTL5Q5HYW3 569 aaPredicted RBP18.52■□□□□ 0.56
COL6A2-203ENST00000397763 RTN4Q9NQC3 1192 aaKnown RBP18.51■□□□□ 0.55
COL6A2-203ENST00000397763 DCAF11Q8TEB1 546 aa18.51■□□□□ 0.55
COL6A2-203ENST00000397763 EXOC6Q8TAG9 804 aa18.5■□□□□ 0.55
COL6A2-203ENST00000397763 MYT1LQ9UL68 1186 aa18.5■□□□□ 0.55
COL6A2-203ENST00000397763 SMG6Q86US8 1419 aaKnown RBP18.5■□□□□ 0.55
COL6A2-203ENST00000397763 WDR62O43379 1518 aa18.5■□□□□ 0.55
COL6A2-203ENST00000397763 KIF21AQ7Z4S6 1674 aa18.49■□□□□ 0.55
COL6A2-203ENST00000397763 RGL3Q3MIN7 710 aa18.49■□□□□ 0.55
COL6A2-203ENST00000397763 ANP32AP39687 249 aaKnown RBP18.49■□□□□ 0.55
COL6A2-203ENST00000397763 PZPP20742 1482 aa18.48■□□□□ 0.55
COL6A2-203ENST00000397763 BCORL1Q5H9F3 1711 aa18.48■□□□□ 0.55
COL6A2-203ENST00000397763 ZNF608Q9ULD9 1512 aaPredicted RBP18.47■□□□□ 0.55
COL6A2-203ENST00000397763 ANO8Q9HCE9 1232 aaPredicted RBP18.47■□□□□ 0.55
COL6A2-203ENST00000397763 ROCK1Q13464 1354 aa18.46■□□□□ 0.55
COL6A2-203ENST00000397763 PLIN1O60240 522 aa18.46■□□□□ 0.55
COL6A2-203ENST00000397763 NUP155O75694 1391 aa18.45■□□□□ 0.54
COL6A2-203ENST00000397763 NUP153P49790 1475 aaKnown RBP18.45■□□□□ 0.54
COL6A2-203ENST00000397763 ZBTB47Q9UFB7 747 aaPredicted RBP18.45■□□□□ 0.54
COL6A2-203ENST00000397763 TARBP1Q13395 1621 aaKnown RBP18.45■□□□□ 0.54
COL6A2-203ENST00000397763 CDCA7LQ96GN5 454 aa18.45■□□□□ 0.54
COL6A2-203ENST00000397763 LAS1LQ9Y4W2 734 aaKnown RBP18.43■□□□□ 0.54
COL6A2-203ENST00000397763 IPO9Q96P70 1041 aaKnown RBP18.43■□□□□ 0.54
COL6A2-203ENST00000397763 CC2D1BQ5T0F9 858 aaKnown RBP18.43■□□□□ 0.54
COL6A2-203ENST00000397763 PLB1Q6P1J6 1458 aa18.41■□□□□ 0.54
COL6A2-203ENST00000397763 HNRNPMP52272 730 aaKnown RBP eCLIP18.41■□□□□ 0.54
COL6A2-203ENST00000397763 KIAA1107Q9UPP5 1409 aa18.41■□□□□ 0.54
COL6A2-203ENST00000397763 DNMT1P26358 1616 aaKnown RBP18.4■□□□□ 0.54
COL6A2-203ENST00000397763 CAMSAP2Q08AD1 1489 aa18.4■□□□□ 0.54
COL6A2-203ENST00000397763 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.4■□□□□ 0.54
COL6A2-203ENST00000397763 NBPF1Q3BBV0 1214 aa18.38■□□□□ 0.53
COL6A2-203ENST00000397763 IL27Q8NEV9 243 aa18.38■□□□□ 0.53
COL6A2-203ENST00000397763 CHMP7Q8WUX9 453 aaPredicted RBP18.38■□□□□ 0.53
COL6A2-203ENST00000397763 DISP1Q96F81 1524 aa18.38■□□□□ 0.53
COL6A2-203ENST00000397763 RRP1P56182 461 aaKnown RBP18.38■□□□□ 0.53
COL6A2-203ENST00000397763 RCAN3Q9UKA8 241 aa18.38■□□□□ 0.53
COL6A2-203ENST00000397763 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
COL6A2-203ENST00000397763 RNF123Q5XPI4 1314 aa18.37■□□□□ 0.53
COL6A2-203ENST00000397763 ANKRD50Q9ULJ7 1429 aa18.37■□□□□ 0.53
COL6A2-203ENST00000397763 ADAMTS12P58397 1594 aa18.36■□□□□ 0.53
COL6A2-203ENST00000397763 ANKRD30AQ9BXX3 1397 aa18.35■□□□□ 0.53
COL6A2-203ENST00000397763 MYBBP1AQ9BQG0 1328 aaKnown RBP18.34■□□□□ 0.53
COL6A2-203ENST00000397763 GPATCH8Q9UKJ3 1502 aaKnown RBP18.34■□□□□ 0.53
COL6A2-203ENST00000397763 KIF15Q9NS87 1388 aa18.33■□□□□ 0.53
COL6A2-203ENST00000397763 TSPY4P0CV99 314 aa18.33■□□□□ 0.53
COL6A2-203ENST00000397763 TSPY10P0CW01 314 aa18.33■□□□□ 0.53
COL6A2-203ENST00000397763 ROCK2O75116 1388 aaKnown RBP18.33■□□□□ 0.52
COL6A2-203ENST00000397763 KIF14Q15058 1648 aa18.32■□□□□ 0.52
COL6A2-203ENST00000397763 TROQ12816 1431 aaPredicted RBP18.32■□□□□ 0.52
COL6A2-203ENST00000397763 MBD5Q9P267 1494 aa18.32■□□□□ 0.52
COL6A2-203ENST00000397763 PLEKHD1A6NEE1 506 aa18.31■□□□□ 0.52
COL6A2-203ENST00000397763 PDE4AP27815 886 aa18.31■□□□□ 0.52
COL6A2-203ENST00000397763 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.3■□□□□ 0.52
COL6A2-203ENST00000397763 KIAA0556O60303 1618 aa18.3■□□□□ 0.52
COL6A2-203ENST00000397763 KDM5CP41229 1560 aa18.29■□□□□ 0.52
COL6A2-203ENST00000397763 RAPGEF6Q8TEU7 1601 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms