RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 SENP3-EIF4A1A0A087X0R7 540 aa20.53■□□□□ 0.88
LSS-202ENST00000397728 SYNJ1O43426 1573 aa20.53■□□□□ 0.88
LSS-202ENST00000397728 SNAPC4Q5SXM2 1469 aa20.53■□□□□ 0.88
LSS-202ENST00000397728 CUX1P39880 1505 aa20.51■□□□□ 0.87
LSS-202ENST00000397728 LAMC3Q9Y6N6 1575 aa20.48■□□□□ 0.87
LSS-202ENST00000397728 MIER1Q8N108 512 aa20.48■□□□□ 0.87
LSS-202ENST00000397728 CC2D1BQ5T0F9 858 aaKnown RBP20.47■□□□□ 0.87
LSS-202ENST00000397728 ARXQ96QS3 562 aa20.46■□□□□ 0.87
LSS-202ENST00000397728 ZNF644Q9H582 1327 aaPredicted RBP20.45■□□□□ 0.87
LSS-202ENST00000397728 NEUROD2Q15784 382 aa20.45■□□□□ 0.86
LSS-202ENST00000397728 DNMBPQ6XZF7 1577 aa20.45■□□□□ 0.86
LSS-202ENST00000397728 TIMELESSQ9UNS1 1208 aa20.45■□□□□ 0.86
LSS-202ENST00000397728 NUDCQ9Y266 331 aa20.44■□□□□ 0.86
LSS-202ENST00000397728 PAK3O75914 559 aaPredicted RBP20.44■□□□□ 0.86
LSS-202ENST00000397728 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
LSS-202ENST00000397728 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.42■□□□□ 0.86
LSS-202ENST00000397728 U2SURPO15042 1029 aaKnown RBP20.42■□□□□ 0.86
LSS-202ENST00000397728 MAPK8IP3Q9UPT6 1336 aa20.4■□□□□ 0.86
LSS-202ENST00000397728 AEBP2Q6ZN18 517 aaPredicted RBP20.4■□□□□ 0.86
LSS-202ENST00000397728 AFAP1Q8N556 730 aa20.39■□□□□ 0.86
LSS-202ENST00000397728 ROCK2O75116 1388 aaKnown RBP20.39■□□□□ 0.85
LSS-202ENST00000397728 SYNJ2O15056 1496 aa20.38■□□□□ 0.85
LSS-202ENST00000397728 TOP2BQ02880 1626 aa20.38■□□□□ 0.85
LSS-202ENST00000397728 FKBP8Q14318 412 aa20.38■□□□□ 0.85
LSS-202ENST00000397728 NUTM2FA1L443 756 aa20.37■□□□□ 0.85
LSS-202ENST00000397728 HDGFL2Q7Z4V5 671 aaPredicted RBP20.37■□□□□ 0.85
LSS-202ENST00000397728 L3MBTL2Q969R5 705 aa20.36■□□□□ 0.85
LSS-202ENST00000397728 HSPA5P11021 654 aaKnown RBP20.36■□□□□ 0.85
LSS-202ENST00000397728 LAS1LQ9Y4W2 734 aaKnown RBP20.36■□□□□ 0.85
LSS-202ENST00000397728 UNC13AQ9UPW8 1703 aa20.34■□□□□ 0.85
LSS-202ENST00000397728 MORC1Q86VD1 984 aa20.34■□□□□ 0.85
LSS-202ENST00000397728 MYOM3Q5VTT5 1437 aa20.32■□□□□ 0.84
LSS-202ENST00000397728 TRAK1Q9UPV9 953 aa20.31■□□□□ 0.84
LSS-202ENST00000397728 CCDC144AA2RUR9 1427 aa20.3■□□□□ 0.84
LSS-202ENST00000397728 CASKIN1Q8WXD9 1431 aa20.28■□□□□ 0.84
LSS-202ENST00000397728 NGDNQ8NEJ9 315 aaKnown RBP20.28■□□□□ 0.84
LSS-202ENST00000397728 KIF15Q9NS87 1388 aa20.28■□□□□ 0.84
LSS-202ENST00000397728 VGFO15240 615 aaPredicted RBP20.27■□□□□ 0.84
LSS-202ENST00000397728 ABCA10Q8WWZ4 1543 aa20.27■□□□□ 0.84
LSS-202ENST00000397728 KIF21BO75037 1637 aa20.26■□□□□ 0.83
LSS-202ENST00000397728 PRXQ9BXM0 1461 aa20.26■□□□□ 0.83
LSS-202ENST00000397728 CSB-PGBD3P0DP91 1061 aa20.26■□□□□ 0.83
LSS-202ENST00000397728 ERICH3Q5RHP9 1530 aa20.25■□□□□ 0.83
LSS-202ENST00000397728 ARHGAP5Q13017 1502 aa20.25■□□□□ 0.83
LSS-202ENST00000397728 CCDC136Q96JN2 1154 aa20.24■□□□□ 0.83
LSS-202ENST00000397728 URB2Q14146 1524 aaKnown RBP20.24■□□□□ 0.83
LSS-202ENST00000397728 MYH16Q9H6N6 1097 aa20.24■□□□□ 0.83
LSS-202ENST00000397728 FGD6Q6ZV73 1430 aa20.24■□□□□ 0.83
LSS-202ENST00000397728 KIAA0586Q9BVV6 1533 aa20.24■□□□□ 0.83
LSS-202ENST00000397728 EIF3AQ14152 1382 aaKnown RBP20.23■□□□□ 0.83
LSS-202ENST00000397728 ARAP1Q96P48 1450 aa20.23■□□□□ 0.83
LSS-202ENST00000397728 RAPGEF3O95398 923 aa20.22■□□□□ 0.83
LSS-202ENST00000397728 IRX6P78412 446 aaPredicted RBP20.22■□□□□ 0.83
LSS-202ENST00000397728 PHLDB1Q86UU1 1377 aa20.22■□□□□ 0.83
LSS-202ENST00000397728 ZNF608Q9ULD9 1512 aaPredicted RBP20.22■□□□□ 0.83
LSS-202ENST00000397728 RTL5Q5HYW3 569 aaPredicted RBP20.21■□□□□ 0.83
LSS-202ENST00000397728 CCDC9Q9Y3X0 531 aaKnown RBP20.21■□□□□ 0.83
LSS-202ENST00000397728 NCOA2Q15596 1464 aa20.2■□□□□ 0.82
LSS-202ENST00000397728 PEG3Q9GZU2 1588 aa20.19■□□□□ 0.82
LSS-202ENST00000397728 TERF2IPQ9NYB0 399 aa20.19■□□□□ 0.82
LSS-202ENST00000397728 LRRC9Q6ZRR7 1453 aa20.19■□□□□ 0.82
LSS-202ENST00000397728 NPHP1O15259 732 aa20.19■□□□□ 0.82
LSS-202ENST00000397728 PNNQ9H307 717 aaKnown RBP20.18■□□□□ 0.82
LSS-202ENST00000397728 UACAQ9BZF9 1416 aa20.16■□□□□ 0.82
LSS-202ENST00000397728 MAGI1Q96QZ7 1491 aaPredicted RBP20.14■□□□□ 0.82
LSS-202ENST00000397728 FYCO1Q9BQS8 1478 aa20.14■□□□□ 0.82
LSS-202ENST00000397728 SCAPERQ9BY12 1400 aa20.14■□□□□ 0.81
LSS-202ENST00000397728 ANKRD50Q9ULJ7 1429 aa20.14■□□□□ 0.81
LSS-202ENST00000397728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.13■□□□□ 0.816e-8■□□□□ 9.7
LSS-202ENST00000397728 GRIN2AQ12879 1464 aa20.13■□□□□ 0.81
LSS-202ENST00000397728 EFCAB5A4FU69 1503 aa20.12■□□□□ 0.81
LSS-202ENST00000397728 UPF2Q9HAU5 1272 aaKnown RBP20.12■□□□□ 0.81
LSS-202ENST00000397728 MINK1Q8N4C8 1332 aaPredicted RBP20.11■□□□□ 0.81
LSS-202ENST00000397728 TROQ12816 1431 aaPredicted RBP20.11■□□□□ 0.81
LSS-202ENST00000397728 FTSJ3Q8IY81 847 aaKnown RBP20.1■□□□□ 0.81
LSS-202ENST00000397728 ST20-MTHFSA0A0A6YYL1 179 aa20.1■□□□□ 0.81
LSS-202ENST00000397728 U2AF1L5P0DN76 240 aaPredicted RBP20.1■□□□□ 0.81
LSS-202ENST00000397728 U2AF1Q01081 240 aaKnown RBP eCLIP20.1■□□□□ 0.81
LSS-202ENST00000397728 RTF1Q92541 710 aaKnown RBP20.1■□□□□ 0.81
LSS-202ENST00000397728 KTN1Q86UP2 1357 aaKnown RBP20.1■□□□□ 0.81
LSS-202ENST00000397728 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.08■□□□□ 0.81
LSS-202ENST00000397728 HSP90AA1P07900 732 aaKnown RBP20.08■□□□□ 0.8
LSS-202ENST00000397728 FRAT1Q92837 279 aaPredicted RBP20.08■□□□□ 0.8
LSS-202ENST00000397728 LTV1Q96GA3 475 aaPredicted RBP20.07■□□□□ 0.8
LSS-202ENST00000397728 IQGAP2Q13576 1575 aa20.06■□□□□ 0.8
LSS-202ENST00000397728 ANP32AP39687 249 aaKnown RBP20.06■□□□□ 0.8
LSS-202ENST00000397728 AMPHP49418 695 aa20.05■□□□□ 0.8
LSS-202ENST00000397728 DHX57Q6P158 1386 aaKnown RBP20.04■□□□□ 0.8
LSS-202ENST00000397728 PLB1Q6P1J6 1458 aa20.02■□□□□ 0.8
LSS-202ENST00000397728 TXNDC2Q86VQ3 553 aa20.01■□□□□ 0.79
LSS-202ENST00000397728 EVC2Q86UK5 1308 aa20.01■□□□□ 0.79
LSS-202ENST00000397728 CD109Q6YHK3 1445 aa19.99■□□□□ 0.79
LSS-202ENST00000397728 ZNF330Q9Y3S2 320 aaPredicted RBP19.99■□□□□ 0.79
LSS-202ENST00000397728 CDK13Q14004 1512 aaKnown RBP19.98■□□□□ 0.79
LSS-202ENST00000397728 PLEKHH2Q8IVE3 1493 aa19.98■□□□□ 0.79
LSS-202ENST00000397728 HECW1Q76N89 1606 aa19.97■□□□□ 0.79
LSS-202ENST00000397728 C9orf84Q5VXU9 1444 aa19.97■□□□□ 0.79
LSS-202ENST00000397728 TMEM132EQ6IEE7 984 aa19.96■□□□□ 0.79
LSS-202ENST00000397728 ATF3P18847 181 aa19.96■□□□□ 0.79
LSS-202ENST00000397728 RALBP1Q15311 655 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms