RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 GRIN2BQ13224 1484 aa19.87■□□□□ 0.77
CCNF-202ENST00000397066 NCOA1Q15788 1441 aa19.85■□□□□ 0.77
CCNF-202ENST00000397066 NPM2Q86SE8 214 aaKnown RBP19.84■□□□□ 0.77
CCNF-202ENST00000397066 SALL2Q9Y467 1007 aaPredicted RBP19.84■□□□□ 0.77
CCNF-202ENST00000397066 ZBTB47Q9UFB7 747 aaPredicted RBP19.84■□□□□ 0.77
CCNF-202ENST00000397066 NUDCQ9Y266 331 aa19.84■□□□□ 0.77
CCNF-202ENST00000397066 ZNF644Q9H582 1327 aaPredicted RBP19.82■□□□□ 0.76
CCNF-202ENST00000397066 UGGT2Q9NYU1 1516 aa19.82■□□□□ 0.76
CCNF-202ENST00000397066 KDM5BQ9UGL1 1544 aa19.8■□□□□ 0.76
CCNF-202ENST00000397066 AKNAQ7Z591 1439 aa19.8■□□□□ 0.76
CCNF-202ENST00000397066 KDM2AQ9Y2K7 1162 aa19.79■□□□□ 0.76
CCNF-202ENST00000397066 CFDP1Q9UEE9 299 aaPredicted RBP19.77■□□□□ 0.76
CCNF-202ENST00000397066 ANKRD30BQ9BXX2 1392 aa19.77■□□□□ 0.76
CCNF-202ENST00000397066 PAK3O75914 559 aaPredicted RBP19.76■□□□□ 0.75
CCNF-202ENST00000397066 CDK13Q14004 1512 aaKnown RBP19.76■□□□□ 0.75
CCNF-202ENST00000397066 MIA2Q96PC5 1412 aa19.76■□□□□ 0.75
CCNF-202ENST00000397066 CARD11Q9BXL7 1154 aa19.75■□□□□ 0.75
CCNF-202ENST00000397066 PKD2Q13563 968 aa19.75■□□□□ 0.75
CCNF-202ENST00000397066 EPRSP07814 1512 aaKnown RBP19.74■□□□□ 0.75
CCNF-202ENST00000397066 URB2Q14146 1524 aaKnown RBP19.74■□□□□ 0.75
CCNF-202ENST00000397066 THOC2Q8NI27 1593 aaKnown RBP19.74■□□□□ 0.75
CCNF-202ENST00000397066 MAGI3Q5TCQ9 1506 aa19.74■□□□□ 0.75
CCNF-202ENST00000397066 USP47Q96K76 1375 aa19.74■□□□□ 0.75
CCNF-202ENST00000397066 SAMD9Q5K651 1589 aa19.73■□□□□ 0.75
CCNF-202ENST00000397066 IPO9Q96P70 1041 aaKnown RBP19.73■□□□□ 0.75
CCNF-202ENST00000397066 TCOF1Q13428 1488 aaKnown RBP19.72■□□□□ 0.75
CCNF-202ENST00000397066 KDM6BO15054 1643 aa19.72■□□□□ 0.75
CCNF-202ENST00000397066 RPRD2Q5VT52 1461 aaKnown RBP19.72■□□□□ 0.75
CCNF-202ENST00000397066 PDS5BQ9NTI5 1447 aa19.72■□□□□ 0.75
CCNF-202ENST00000397066 SMG6Q86US8 1419 aaKnown RBP19.71■□□□□ 0.75
CCNF-202ENST00000397066 HECW1Q76N89 1606 aa19.71■□□□□ 0.75
CCNF-202ENST00000397066 DENND4BO75064 1496 aaPredicted RBP19.71■□□□□ 0.75
CCNF-202ENST00000397066 DAPK1P53355 1430 aa19.7■□□□□ 0.74
CCNF-202ENST00000397066 GCC2Q8IWJ2 1684 aa19.65■□□□□ 0.74
CCNF-202ENST00000397066 LRRIQ1Q96JM4 1722 aa19.65■□□□□ 0.74
CCNF-202ENST00000397066 ROCK1Q13464 1354 aa19.65■□□□□ 0.74
CCNF-202ENST00000397066 ABCC5O15440 1437 aa19.65■□□□□ 0.74
CCNF-202ENST00000397066 FBLN2P98095 1184 aa19.65■□□□□ 0.74
CCNF-202ENST00000397066 PNISRQ8TF01 805 aaKnown RBP19.64■□□□□ 0.73
CCNF-202ENST00000397066 ARHGEF11O15085 1522 aa19.63■□□□□ 0.73
CCNF-202ENST00000397066 DCAF11Q8TEB1 546 aa19.62■□□□□ 0.73
CCNF-202ENST00000397066 ST20-MTHFSA0A0A6YYL1 179 aa19.61■□□□□ 0.73
CCNF-202ENST00000397066 LAS1LQ9Y4W2 734 aaKnown RBP19.61■□□□□ 0.73
CCNF-202ENST00000397066 TEX14Q8IWB6 1497 aa19.61■□□□□ 0.73
CCNF-202ENST00000397066 EXOC6Q8TAG9 804 aa19.6■□□□□ 0.73
CCNF-202ENST00000397066 RCAN3Q9UKA8 241 aa19.6■□□□□ 0.73
CCNF-202ENST00000397066 SPATA31E1Q6ZUB1 1445 aa19.6■□□□□ 0.73
CCNF-202ENST00000397066 LAMC3Q9Y6N6 1575 aa19.59■□□□□ 0.73
CCNF-202ENST00000397066 ROCK2O75116 1388 aaKnown RBP19.59■□□□□ 0.73
CCNF-202ENST00000397066 KIF15Q9NS87 1388 aa19.59■□□□□ 0.73
CCNF-202ENST00000397066 IQGAP2Q13576 1575 aa19.59■□□□□ 0.73
CCNF-202ENST00000397066 NUP155O75694 1391 aa19.58■□□□□ 0.73
CCNF-202ENST00000397066 TSPY4P0CV99 314 aa19.58■□□□□ 0.73
CCNF-202ENST00000397066 TSPY10P0CW01 314 aa19.58■□□□□ 0.73
CCNF-202ENST00000397066 ABCA5Q8WWZ7 1642 aa19.58■□□□□ 0.73
CCNF-202ENST00000397066 DHX29Q7Z478 1369 aaKnown RBP19.58■□□□□ 0.73
CCNF-202ENST00000397066 RRP1P56182 461 aaKnown RBP19.58■□□□□ 0.72
CCNF-202ENST00000397066 DAXXQ9UER7 740 aaPredicted RBP19.57■□□□□ 0.72
CCNF-202ENST00000397066 RALBP1Q15311 655 aa19.57■□□□□ 0.72
CCNF-202ENST00000397066 ARID4BQ4LE39 1312 aaPredicted RBP19.56■□□□□ 0.72
CCNF-202ENST00000397066 MYBBP1AQ9BQG0 1328 aaKnown RBP19.56■□□□□ 0.72
CCNF-202ENST00000397066 ANKRD30AQ9BXX3 1397 aa19.56■□□□□ 0.72
CCNF-202ENST00000397066 RGL3Q3MIN7 710 aa19.55■□□□□ 0.72
CCNF-202ENST00000397066 KIAA1107Q9UPP5 1409 aa19.55■□□□□ 0.72
CCNF-202ENST00000397066 TCERG1O14776 1098 aaKnown RBP19.54■□□□□ 0.72
CCNF-202ENST00000397066 NEFMP07197 916 aa19.53■□□□□ 0.72
CCNF-202ENST00000397066 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
CCNF-202ENST00000397066 CC2D1BQ5T0F9 858 aaKnown RBP19.52■□□□□ 0.71
CCNF-202ENST00000397066 PDE4AP27815 886 aa19.51■□□□□ 0.71
CCNF-202ENST00000397066 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
CCNF-202ENST00000397066 PLEKHD1A6NEE1 506 aa19.51■□□□□ 0.71
CCNF-202ENST00000397066 CHMP7Q8WUX9 453 aaPredicted RBP19.5■□□□□ 0.71
CCNF-202ENST00000397066 RNF123Q5XPI4 1314 aa19.5■□□□□ 0.71
CCNF-202ENST00000397066 WDR62O43379 1518 aa19.49■□□□□ 0.71
CCNF-202ENST00000397066 KIF21AQ7Z4S6 1674 aa19.49■□□□□ 0.71
CCNF-202ENST00000397066 NLRP13Q86W25 1043 aa19.49■□□□□ 0.71
CCNF-202ENST00000397066 KTN1Q86UP2 1357 aaKnown RBP19.49■□□□□ 0.71
CCNF-202ENST00000397066 BRD4O60885 1362 aaPredicted RBP19.48■□□□□ 0.71
CCNF-202ENST00000397066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.48■□□□□ 0.71
CCNF-202ENST00000397066 ANKRD50Q9ULJ7 1429 aa19.48■□□□□ 0.71
CCNF-202ENST00000397066 PLIN1O60240 522 aa19.48■□□□□ 0.71
CCNF-202ENST00000397066 PZPP20742 1482 aa19.46■□□□□ 0.71
CCNF-202ENST00000397066 RTN4Q9NQC3 1192 aaKnown RBP19.45■□□□□ 0.7
CCNF-202ENST00000397066 DNMT1P26358 1616 aaKnown RBP19.45■□□□□ 0.7
CCNF-202ENST00000397066 CAMSAP2Q08AD1 1489 aa19.45■□□□□ 0.7
CCNF-202ENST00000397066 CDCA7LQ96GN5 454 aa19.45■□□□□ 0.7
CCNF-202ENST00000397066 PDE3BQ13370 1112 aa19.44■□□□□ 0.7
CCNF-202ENST00000397066 TROQ12816 1431 aaPredicted RBP19.42■□□□□ 0.7
CCNF-202ENST00000397066 PPM1GO15355 546 aaPredicted RBP19.42■□□□□ 0.7
CCNF-202ENST00000397066 HNRNPMP52272 730 aaKnown RBP eCLIP19.42■□□□□ 0.7
CCNF-202ENST00000397066 NUP153P49790 1475 aaKnown RBP19.41■□□□□ 0.7
CCNF-202ENST00000397066 DDRGK1Q96HY6 314 aa19.39■□□□□ 0.69
CCNF-202ENST00000397066 CRBNQ96SW2 442 aa19.38■□□□□ 0.69
CCNF-202ENST00000397066 BACH2Q9BYV9 841 aa19.38■□□□□ 0.69
CCNF-202ENST00000397066 MS4A1P11836 297 aa19.37■□□□□ 0.69
CCNF-202ENST00000397066 KIAA0586Q9BVV6 1533 aa19.36■□□□□ 0.69
CCNF-202ENST00000397066 WDR43Q15061 677 aaKnown RBP eCLIP19.36■□□□□ 0.69
CCNF-202ENST00000397066 BCORL1Q5H9F3 1711 aa19.35■□□□□ 0.69
CCNF-202ENST00000397066 SKAP1Q86WV1 359 aa19.35■□□□□ 0.69
CCNF-202ENST00000397066 ADAMTS12P58397 1594 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms