RNA–Protein interactions for RNA: ENST00000397011.2

EIF3B-202, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3B, Length 2,966 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-202ENST00000397011 HECW1Q76N89 1606 aa26.42■■□□□ 1.82
EIF3B-202ENST00000397011 ARHGEF11O15085 1522 aa26.4■■□□□ 1.82
EIF3B-202ENST00000397011 CFDP1Q9UEE9 299 aaPredicted RBP26.4■■□□□ 1.82
EIF3B-202ENST00000397011 PRG4Q92954 1404 aaPredicted RBP26.36■■□□□ 1.81
EIF3B-202ENST00000397011 PBRM1Q86U86 1689 aa26.36■■□□□ 1.81
EIF3B-202ENST00000397011 CHMP7Q8WUX9 453 aaPredicted RBP26.36■■□□□ 1.81
EIF3B-202ENST00000397011 PRKRIP1Q9H875 184 aaPredicted RBP26.36■■□□□ 1.81
EIF3B-202ENST00000397011 TCOF1Q13428 1488 aaKnown RBP26.35■■□□□ 1.81
EIF3B-202ENST00000397011 DAPK1P53355 1430 aa26.35■■□□□ 1.81
EIF3B-202ENST00000397011 WDR62O43379 1518 aa26.34■■□□□ 1.81
EIF3B-202ENST00000397011 ABCC5O15440 1437 aa26.34■■□□□ 1.81
EIF3B-202ENST00000397011 ANP32EQ9BTT0 268 aa26.33■■□□□ 1.81
EIF3B-202ENST00000397011 ADAMTS12P58397 1594 aa26.33■■□□□ 1.8
EIF3B-202ENST00000397011 CCDC7Q96M83 1385 aa26.32■■□□□ 1.8
EIF3B-202ENST00000397011 CDK11AQ9UQ88 783 aaPredicted RBP26.32■■□□□ 1.8
EIF3B-202ENST00000397011 KIF7Q2M1P5 1343 aa26.32■■□□□ 1.8
EIF3B-202ENST00000397011 ANKRD30BQ9BXX2 1392 aa26.3■■□□□ 1.8
EIF3B-202ENST00000397011 MIA2Q96PC5 1412 aa26.3■■□□□ 1.8
EIF3B-202ENST00000397011 CNTLNQ9NXG0 1405 aa26.29■■□□□ 1.8
EIF3B-202ENST00000397011 KDM2AQ9Y2K7 1162 aa26.29■■□□□ 1.8
EIF3B-202ENST00000397011 PKD2Q13563 968 aa26.28■■□□□ 1.8
EIF3B-202ENST00000397011 NUP153P49790 1475 aaKnown RBP26.28■■□□□ 1.8
EIF3B-202ENST00000397011 MRC2Q9UBG0 1479 aa26.28■■□□□ 1.8
EIF3B-202ENST00000397011 PLB1Q6P1J6 1458 aa26.26■■□□□ 1.79
EIF3B-202ENST00000397011 GCC2Q8IWJ2 1684 aa26.26■■□□□ 1.79
EIF3B-202ENST00000397011 B4GALNT3Q6L9W6 998 aa26.25■■□□□ 1.79
EIF3B-202ENST00000397011 DISP1Q96F81 1524 aa26.24■■□□□ 1.79
EIF3B-202ENST00000397011 RPRD2Q5VT52 1461 aaKnown RBP26.2■■□□□ 1.78
EIF3B-202ENST00000397011 NCOA1Q15788 1441 aa26.19■■□□□ 1.78
EIF3B-202ENST00000397011 KIAA0586Q9BVV6 1533 aa26.16■■□□□ 1.78
EIF3B-202ENST00000397011 AKNAQ7Z591 1439 aa26.16■■□□□ 1.78
EIF3B-202ENST00000397011 KIAA0556O60303 1618 aa26.15■■□□□ 1.78
EIF3B-202ENST00000397011 TEX14Q8IWB6 1497 aa26.15■■□□□ 1.78
EIF3B-202ENST00000397011 JPH4Q96JJ6 628 aa26.13■■□□□ 1.77
EIF3B-202ENST00000397011 GRIN2AQ12879 1464 aa26.12■■□□□ 1.77
EIF3B-202ENST00000397011 SALL2Q9Y467 1007 aaPredicted RBP26.12■■□□□ 1.77
EIF3B-202ENST00000397011 MSH5O43196 834 aa26.12■■□□□ 1.77
EIF3B-202ENST00000397011 HNRNPMP52272 730 aaKnown RBP eCLIP26.12■■□□□ 1.775e-8■■■■□ 23.8
EIF3B-202ENST00000397011 ERCC6Q03468 1493 aa26.11■■□□□ 1.77
EIF3B-202ENST00000397011 CAMSAP2Q08AD1 1489 aa26.11■■□□□ 1.77
EIF3B-202ENST00000397011 ROCK1Q13464 1354 aa26.11■■□□□ 1.77
EIF3B-202ENST00000397011 IFT140Q96RY7 1462 aa26.1■■□□□ 1.77
EIF3B-202ENST00000397011 USP47Q96K76 1375 aa26.1■■□□□ 1.77
EIF3B-202ENST00000397011 NUP155O75694 1391 aa26.08■■□□□ 1.77
EIF3B-202ENST00000397011 RAPGEF6Q8TEU7 1601 aa26.08■■□□□ 1.77
EIF3B-202ENST00000397011 PLEKHD1A6NEE1 506 aa26.07■■□□□ 1.76
EIF3B-202ENST00000397011 DNMT1P26358 1616 aaKnown RBP26.07■■□□□ 1.76
EIF3B-202ENST00000397011 PZPP20742 1482 aa26.07■■□□□ 1.76
EIF3B-202ENST00000397011 CARD11Q9BXL7 1154 aa26.07■■□□□ 1.76
EIF3B-202ENST00000397011 TROQ12816 1431 aaPredicted RBP26.07■■□□□ 1.76
EIF3B-202ENST00000397011 KIF14Q15058 1648 aa26.06■■□□□ 1.76
EIF3B-202ENST00000397011 RGL3Q3MIN7 710 aa26.05■■□□□ 1.76
EIF3B-202ENST00000397011 GPATCH8Q9UKJ3 1502 aaKnown RBP26.05■■□□□ 1.76
EIF3B-202ENST00000397011 DCAF11Q8TEB1 546 aa26.05■■□□□ 1.76
EIF3B-202ENST00000397011 SPATA31E1Q6ZUB1 1445 aa26.03■■□□□ 1.76
EIF3B-202ENST00000397011 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.03■■□□□ 1.765e-10■■□□□ 12.3
EIF3B-202ENST00000397011 EIF4G3O43432 1585 aaKnown RBP26.02■■□□□ 1.76
EIF3B-202ENST00000397011 PPP4R2Q9NY27 417 aa26.02■■□□□ 1.76
EIF3B-202ENST00000397011 ZBED9Q6R2W3 1325 aa26.02■■□□□ 1.76
EIF3B-202ENST00000397011 ST20-MTHFSA0A0A6YYL1 179 aa26.01■■□□□ 1.75
EIF3B-202ENST00000397011 TSPY4P0CV99 314 aa26.01■■□□□ 1.75
EIF3B-202ENST00000397011 TSPY10P0CW01 314 aa26.01■■□□□ 1.75
EIF3B-202ENST00000397011 ANKRD50Q9ULJ7 1429 aa26■■□□□ 1.75
EIF3B-202ENST00000397011 ANKRD30AQ9BXX3 1397 aa25.99■■□□□ 1.75
EIF3B-202ENST00000397011 TMC1Q8TDI8 760 aa25.98■■□□□ 1.75
EIF3B-202ENST00000397011 KIAA1107Q9UPP5 1409 aa25.98■■□□□ 1.75
EIF3B-202ENST00000397011 ERICH6Q7L0X2 663 aa25.94■■□□□ 1.74
EIF3B-202ENST00000397011 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
EIF3B-202ENST00000397011 DHX29Q7Z478 1369 aaKnown RBP25.92■■□□□ 1.74
EIF3B-202ENST00000397011 CARMIL2Q6F5E8 1435 aa25.9■■□□□ 1.74
EIF3B-202ENST00000397011 BCORL1Q5H9F3 1711 aa25.88■■□□□ 1.73
EIF3B-202ENST00000397011 C9orf84Q5VXU9 1444 aa25.88■■□□□ 1.73
EIF3B-202ENST00000397011 KIF15Q9NS87 1388 aa25.85■■□□□ 1.73
EIF3B-202ENST00000397011 SYNJ2O15056 1496 aa25.84■■□□□ 1.73
EIF3B-202ENST00000397011 NBPF1Q3BBV0 1214 aa25.84■■□□□ 1.73
EIF3B-202ENST00000397011 CCDC136Q96JN2 1154 aa25.83■■□□□ 1.72
EIF3B-202ENST00000397011 ATP10BO94823 1461 aa25.81■■□□□ 1.72
EIF3B-202ENST00000397011 PNISRQ8TF01 805 aaKnown RBP25.81■■□□□ 1.72
EIF3B-202ENST00000397011 NUDCQ9Y266 331 aa25.8■■□□□ 1.72
EIF3B-202ENST00000397011 ROCK2O75116 1388 aaKnown RBP25.8■■□□□ 1.72
EIF3B-202ENST00000397011 CC2D1BQ5T0F9 858 aaKnown RBP25.78■■□□□ 1.72
EIF3B-202ENST00000397011 MAGI1Q96QZ7 1491 aaPredicted RBP25.78■■□□□ 1.72
EIF3B-202ENST00000397011 MBD5Q9P267 1494 aa25.78■■□□□ 1.72
EIF3B-202ENST00000397011 ITSN2Q9NZM3 1697 aa25.75■■□□□ 1.71
EIF3B-202ENST00000397011 ADGRL2O95490 1459 aa25.72■■□□□ 1.71
EIF3B-202ENST00000397011 FANCIQ9NVI1 1328 aa25.71■■□□□ 1.71
EIF3B-202ENST00000397011 PTPRGP23470 1445 aa25.71■■□□□ 1.71
EIF3B-202ENST00000397011 ERICH6BQ5W0A0 696 aa25.7■■□□□ 1.7
EIF3B-202ENST00000397011 ADGBQ8N7X0 1667 aa25.7■■□□□ 1.7
EIF3B-202ENST00000397011 KDM5CP41229 1560 aa25.7■■□□□ 1.7
EIF3B-202ENST00000397011 CDC42BPAQ5VT25 1732 aa25.67■■□□□ 1.7
EIF3B-202ENST00000397011 SMG6Q86US8 1419 aaKnown RBP25.67■■□□□ 1.7
EIF3B-202ENST00000397011 NBR1Q14596 966 aa25.67■■□□□ 1.7
EIF3B-202ENST00000397011 ABCC10Q5T3U5 1492 aa25.67■■□□□ 1.7
EIF3B-202ENST00000397011 NUP160Q12769 1436 aa25.66■■□□□ 1.7
EIF3B-202ENST00000397011 CDCA7LQ96GN5 454 aa25.65■■□□□ 1.7
EIF3B-202ENST00000397011 RALGAPBQ86X10 1494 aa25.64■■□□□ 1.69
EIF3B-202ENST00000397011 CROCC2H7BZ55 1655 aa25.63■■□□□ 1.69
EIF3B-202ENST00000397011 MYBBP1AQ9BQG0 1328 aaKnown RBP25.63■■□□□ 1.69
EIF3B-202ENST00000397011 CCDC144AA2RUR9 1427 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms