RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 PKD2Q13563 968 aa16.57■□□□□ 0.24
ATN1-202ENST00000396684 NUP155O75694 1391 aa16.57■□□□□ 0.24
ATN1-202ENST00000396684 ESF1Q9H501 851 aaKnown RBP16.57■□□□□ 0.24
ATN1-202ENST00000396684 KIAA0556O60303 1618 aa16.55■□□□□ 0.24
ATN1-202ENST00000396684 NUP160Q12769 1436 aa16.54■□□□□ 0.24
ATN1-202ENST00000396684 NEFLP07196 543 aa16.54■□□□□ 0.24
ATN1-202ENST00000396684 RGL3Q3MIN7 710 aa16.54■□□□□ 0.24
ATN1-202ENST00000396684 SPAG9O60271 1321 aaKnown RBP16.53■□□□□ 0.24
ATN1-202ENST00000396684 SAMD9Q5K651 1589 aa16.52■□□□□ 0.24
ATN1-202ENST00000396684 CYB5RLQ6IPT4 315 aa16.52■□□□□ 0.24
ATN1-202ENST00000396684 RAPGEF6Q8TEU7 1601 aa16.51■□□□□ 0.23
ATN1-202ENST00000396684 MIER1Q8N108 512 aa16.51■□□□□ 0.23
ATN1-202ENST00000396684 CFAP43Q8NDM7 1665 aa16.51■□□□□ 0.23
ATN1-202ENST00000396684 HFM1A2PYH4 1435 aa16.49■□□□□ 0.23
ATN1-202ENST00000396684 PPP1R15AO75807 674 aaPredicted RBP16.49■□□□□ 0.23
ATN1-202ENST00000396684 KANK1Q14678 1352 aa16.49■□□□□ 0.23
ATN1-202ENST00000396684 DISP1Q96F81 1524 aa16.49■□□□□ 0.23
ATN1-202ENST00000396684 NUP153P49790 1475 aaKnown RBP16.49■□□□□ 0.23
ATN1-202ENST00000396684 ARHGAP5Q13017 1502 aa16.47■□□□□ 0.23
ATN1-202ENST00000396684 PTPN23Q9H3S7 1636 aa16.47■□□□□ 0.23
ATN1-202ENST00000396684 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
ATN1-202ENST00000396684 CEP170Q5SW79 1584 aa16.45■□□□□ 0.22
ATN1-202ENST00000396684 KIF15Q9NS87 1388 aa16.45■□□□□ 0.22
ATN1-202ENST00000396684 DAPK1P53355 1430 aa16.45■□□□□ 0.22
ATN1-202ENST00000396684 ANKRD50Q9ULJ7 1429 aa16.43■□□□□ 0.22
ATN1-202ENST00000396684 ARHGEF11O15085 1522 aa16.43■□□□□ 0.22
ATN1-202ENST00000396684 DCAF11Q8TEB1 546 aa16.43■□□□□ 0.22
ATN1-202ENST00000396684 KIF14Q15058 1648 aa16.42■□□□□ 0.22
ATN1-202ENST00000396684 KIF3BO15066 747 aa16.42■□□□□ 0.22
ATN1-202ENST00000396684 L3MBTL2Q969R5 705 aa16.42■□□□□ 0.22
ATN1-202ENST00000396684 CARD11Q9BXL7 1154 aa16.42■□□□□ 0.22
ATN1-202ENST00000396684 NAIPQ13075 1403 aa16.42■□□□□ 0.22
ATN1-202ENST00000396684 ATP10BO94823 1461 aa16.41■□□□□ 0.22
ATN1-202ENST00000396684 GGT6Q6P531 493 aa16.4■□□□□ 0.22
ATN1-202ENST00000396684 C9orf84Q5VXU9 1444 aa16.39■□□□□ 0.21
ATN1-202ENST00000396684 BCANQ96GW7 911 aa16.39■□□□□ 0.21
ATN1-202ENST00000396684 CAMSAP2Q08AD1 1489 aa16.38■□□□□ 0.21
ATN1-202ENST00000396684 PLEKHH2Q8IVE3 1493 aa16.38■□□□□ 0.21
ATN1-202ENST00000396684 ROCK1Q13464 1354 aa16.37■□□□□ 0.21
ATN1-202ENST00000396684 ABCC5O15440 1437 aa16.36■□□□□ 0.21
ATN1-202ENST00000396684 AFAP1Q8N556 730 aa16.34■□□□□ 0.21
ATN1-202ENST00000396684 GPATCH8Q9UKJ3 1502 aaKnown RBP16.34■□□□□ 0.21
ATN1-202ENST00000396684 HSPA5P11021 654 aaKnown RBP16.34■□□□□ 0.21
ATN1-202ENST00000396684 ARID4BQ4LE39 1312 aaPredicted RBP16.33■□□□□ 0.2
ATN1-202ENST00000396684 PLPPR3Q6T4P5 718 aa16.32■□□□□ 0.2
ATN1-202ENST00000396684 CCDC144AA2RUR9 1427 aa16.3■□□□□ 0.2
ATN1-202ENST00000396684 PTPRKQ15262 1439 aa16.3■□□□□ 0.2
ATN1-202ENST00000396684 CCDC141Q6ZP82 1450 aa16.3■□□□□ 0.2
ATN1-202ENST00000396684 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
ATN1-202ENST00000396684 FAM69CQ0P6D2 419 aa16.29■□□□□ 0.2
ATN1-202ENST00000396684 GTF3C3Q9Y5Q9 886 aa16.29■□□□□ 0.2
ATN1-202ENST00000396684 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
ATN1-202ENST00000396684 ITSN2Q9NZM3 1697 aa16.28■□□□□ 0.2
ATN1-202ENST00000396684 TCOF1Q13428 1488 aaKnown RBP16.27■□□□□ 0.2
ATN1-202ENST00000396684 NCOA1Q15788 1441 aa16.26■□□□□ 0.19
ATN1-202ENST00000396684 MLECQ14165 292 aa16.26■□□□□ 0.19
ATN1-202ENST00000396684 MAGI3Q5TCQ9 1506 aa16.26■□□□□ 0.19
ATN1-202ENST00000396684 WASHC2CQ9Y4E1 1318 aa16.26■□□□□ 0.19
ATN1-202ENST00000396684 CHD1O14646 1710 aa16.25■□□□□ 0.19
ATN1-202ENST00000396684 ABCC2Q92887 1545 aa16.24■□□□□ 0.19
ATN1-202ENST00000396684 MRS2Q9HD23 443 aa16.24■□□□□ 0.19
ATN1-202ENST00000396684 FAM9BQ8IZU0 186 aa16.23■□□□□ 0.19
ATN1-202ENST00000396684 ROCK2O75116 1388 aaKnown RBP16.23■□□□□ 0.19
ATN1-202ENST00000396684 SENP3Q9H4L4 574 aaPredicted RBP16.23■□□□□ 0.19
ATN1-202ENST00000396684 SCAPERQ9BY12 1400 aa16.22■□□□□ 0.19
ATN1-202ENST00000396684 HNRNPUQ00839 825 aaKnown RBP eCLIP16.22■□□□□ 0.19
ATN1-202ENST00000396684 KIAA1107Q9UPP5 1409 aa16.22■□□□□ 0.19
ATN1-202ENST00000396684 CDCA8Q53HL2 280 aa16.21■□□□□ 0.19
ATN1-202ENST00000396684 TMC1Q8TDI8 760 aa16.21■□□□□ 0.19
ATN1-202ENST00000396684 ABCA8O94911 1581 aa16.19■□□□□ 0.18
ATN1-202ENST00000396684 CD109Q6YHK3 1445 aa16.18■□□□□ 0.18
ATN1-202ENST00000396684 PLCH2O75038 1416 aa16.17■□□□□ 0.18
ATN1-202ENST00000396684 TMF1P82094 1093 aa16.16■□□□□ 0.18
ATN1-202ENST00000396684 ASXL2Q76L83 1435 aa16.15■□□□□ 0.18
ATN1-202ENST00000396684 ADGRL1O94910 1474 aa16.15■□□□□ 0.18
ATN1-202ENST00000396684 WDR7Q9Y4E6 1490 aa16.15■□□□□ 0.18
ATN1-202ENST00000396684 FANCAO15360 1455 aa16.14■□□□□ 0.17
ATN1-202ENST00000396684 MAPKBP1O60336 1514 aa16.13■□□□□ 0.17
ATN1-202ENST00000396684 SLC24A1O60721 1099 aa16.13■□□□□ 0.17
ATN1-202ENST00000396684 ANKRD30BQ9BXX2 1392 aa16.12■□□□□ 0.17
ATN1-202ENST00000396684 DNMT1P26358 1616 aaKnown RBP16.12■□□□□ 0.17
ATN1-202ENST00000396684 RAPGEF3O95398 923 aa16.11■□□□□ 0.17
ATN1-202ENST00000396684 SYCP2Q9BX26 1530 aa16.11■□□□□ 0.17
ATN1-202ENST00000396684 USP47Q96K76 1375 aa16.1■□□□□ 0.17
ATN1-202ENST00000396684 CCER2I3L3R5 266 aa16.1■□□□□ 0.17
ATN1-202ENST00000396684 KNSTRNQ9Y448 316 aa16.09■□□□□ 0.17
ATN1-202ENST00000396684 ST20-MTHFSA0A0A6YYL1 179 aa16.08■□□□□ 0.17
ATN1-202ENST00000396684 SHANK2Q9UPX8 1470 aa16.07■□□□□ 0.16
ATN1-202ENST00000396684 POGKQ9P215 609 aa16.05■□□□□ 0.16
ATN1-202ENST00000396684 NBPF8Q3BBV2 869 aa16.05■□□□□ 0.16
ATN1-202ENST00000396684 ERCC6L2Q5T890 1561 aa16.05■□□□□ 0.16
ATN1-202ENST00000396684 UHRF1BP1LA0JNW5 1464 aa16.05■□□□□ 0.16
ATN1-202ENST00000396684 ABCC10Q5T3U5 1492 aa16.05■□□□□ 0.16
ATN1-202ENST00000396684 HDGFP51858 240 aaKnown RBP16.04■□□□□ 0.16
ATN1-202ENST00000396684 EIF3AQ14152 1382 aaKnown RBP16.04■□□□□ 0.16
ATN1-202ENST00000396684 STAC3Q96MF2 364 aa16.04■□□□□ 0.16
ATN1-202ENST00000396684 WDR43Q15061 677 aaKnown RBP eCLIP16.03■□□□□ 0.16
ATN1-202ENST00000396684 RPRD2Q5VT52 1461 aaKnown RBP16.03■□□□□ 0.16
ATN1-202ENST00000396684 TRAPPC8Q9Y2L5 1435 aa16.02■□□□□ 0.15
ATN1-202ENST00000396684 KDM5BQ9UGL1 1544 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms