RNA–Protein interactions for RNA: ENST00000396495.3

TNFRSF17-202, Transcript of TNF receptor superfamily member 17, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF17, Length 668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17-202ENST00000396495 ANKRD13DQ6ZTN6 518 aa7.11□□□□□ -1.27
TNFRSF17-202ENST00000396495 TAOK2Q9UL54 1235 aa7.11□□□□□ -1.27
TNFRSF17-202ENST00000396495 ZSWIM6Q9HCJ5 1215 aa7.1□□□□□ -1.27
TNFRSF17-202ENST00000396495 HCSTQ9UBK5 93 aa7.09□□□□□ -1.27
TNFRSF17-202ENST00000396495 BOLA1Q9Y3E2 137 aa7.09□□□□□ -1.27
TNFRSF17-202ENST00000396495 FBXO3Q9UK99 471 aa7.08□□□□□ -1.28
TNFRSF17-202ENST00000396495 PDIA4P13667 645 aaKnown RBP7.05□□□□□ -1.28
TNFRSF17-202ENST00000396495 LSM11P83369 360 aaKnown RBP eCLIP7.02□□□□□ -1.29
TNFRSF17-202ENST00000396495 BCANQ96GW7 911 aa7.02□□□□□ -1.29
TNFRSF17-202ENST00000396495 PSEN1P49768 467 aa7.01□□□□□ -1.29
TNFRSF17-202ENST00000396495 NPM2Q86SE8 214 aaKnown RBP7.01□□□□□ -1.29
TNFRSF17-202ENST00000396495 ILDR1Q86SU0 546 aaPredicted RBP7.01□□□□□ -1.29
TNFRSF17-202ENST00000396495 ANP32EQ9BTT0 268 aa7.01□□□□□ -1.29
TNFRSF17-202ENST00000396495 DPY19L2Q6NUT2 758 aa7□□□□□ -1.29
TNFRSF17-202ENST00000396495 PKNOX2Q96KN3 472 aa7□□□□□ -1.29
TNFRSF17-202ENST00000396495 IRX2Q9BZI1 471 aaPredicted RBP7□□□□□ -1.29
TNFRSF17-202ENST00000396495 NEFLP07196 543 aa6.99□□□□□ -1.29
TNFRSF17-202ENST00000396495 RGS20O76081 388 aa6.98□□□□□ -1.29
TNFRSF17-202ENST00000396495 GSE1Q14687 1217 aa6.98□□□□□ -1.29
TNFRSF17-202ENST00000396495 PBX2P40425 430 aa6.97□□□□□ -1.29
TNFRSF17-202ENST00000396495 GTF3C3Q9Y5Q9 886 aa6.96□□□□□ -1.3
TNFRSF17-202ENST00000396495 PDAP1Q13442 181 aaKnown RBP6.95□□□□□ -1.3
TNFRSF17-202ENST00000396495 GPR153Q6NV75 609 aa6.95□□□□□ -1.3
TNFRSF17-202ENST00000396495 ZNF316A6NFI3 1004 aaPredicted RBP6.94□□□□□ -1.3
TNFRSF17-202ENST00000396495 PDE4CQ08493 712 aa6.94□□□□□ -1.3
TNFRSF17-202ENST00000396495 CABP2Q9NPB3 220 aa6.94□□□□□ -1.3
TNFRSF17-202ENST00000396495 TAF7LQ5H9L4 462 aa6.92□□□□□ -1.3
TNFRSF17-202ENST00000396495 CHRM1P11229 460 aaPredicted RBP6.91□□□□□ -1.3
TNFRSF17-202ENST00000396495 ERICH6BQ5W0A0 696 aa6.9□□□□□ -1.3
TNFRSF17-202ENST00000396495 CDK11AQ9UQ88 783 aaPredicted RBP6.9□□□□□ -1.3
TNFRSF17-202ENST00000396495 DCAF8L2P0C7V8 631 aa6.89□□□□□ -1.31
TNFRSF17-202ENST00000396495 TPRNQ4KMQ1 711 aa6.89□□□□□ -1.31
TNFRSF17-202ENST00000396495 ARSIQ5FYB1 569 aa6.89□□□□□ -1.31
TNFRSF17-202ENST00000396495 BRD2P25440 801 aaKnown RBP6.88□□□□□ -1.31
TNFRSF17-202ENST00000396495 FGD1P98174 961 aa6.87□□□□□ -1.31
TNFRSF17-202ENST00000396495 C14orf37Q86TY3 774 aa6.86□□□□□ -1.31
TNFRSF17-202ENST00000396495 ANO8Q9HCE9 1232 aaPredicted RBP6.86□□□□□ -1.31
TNFRSF17-202ENST00000396495 STAC3Q96MF2 364 aa6.85□□□□□ -1.31
TNFRSF17-202ENST00000396495 ADGRD1Q6QNK2 874 aa6.83□□□□□ -1.32
TNFRSF17-202ENST00000396495 MICALL2Q8IY33 904 aa6.83□□□□□ -1.32
TNFRSF17-202ENST00000396495 LOC105371045A0A1W2PR82 267 aa6.82□□□□□ -1.32
TNFRSF17-202ENST00000396495 TMEM132AQ24JP5 1023 aa6.82□□□□□ -1.32
TNFRSF17-202ENST00000396495 CHMP4AQ9BY43 222 aa6.82□□□□□ -1.32
TNFRSF17-202ENST00000396495 ACIN1Q9UKV3 1341 aaKnown RBP6.81□□□□□ -1.32
TNFRSF17-202ENST00000396495 RSPH4AQ5TD94 716 aa6.81□□□□□ -1.32
TNFRSF17-202ENST00000396495 IFFO2Q5TF58 517 aa6.81□□□□□ -1.32
TNFRSF17-202ENST00000396495 Q6ZNB5 142 aa6.81□□□□□ -1.32
TNFRSF17-202ENST00000396495 TMEM92Q6UXU6 159 aa6.8□□□□□ -1.32
TNFRSF17-202ENST00000396495 AXIN2Q9Y2T1 843 aa6.8□□□□□ -1.32
TNFRSF17-202ENST00000396495 KCTD12Q96CX2 325 aaKnown RBP6.79□□□□□ -1.32
TNFRSF17-202ENST00000396495 CCDC180Q9P1Z9 1646 aa6.79□□□□□ -1.32
TNFRSF17-202ENST00000396495 TK2O00142 265 aa6.78□□□□□ -1.32
TNFRSF17-202ENST00000396495 ARHGAP33O14559 1287 aa6.78□□□□□ -1.32
TNFRSF17-202ENST00000396495 PLCB2Q00722 1185 aa6.78□□□□□ -1.32
TNFRSF17-202ENST00000396495 KHSRPQ92945 711 aaKnown RBP eCLIP6.77□□□□□ -1.33
TNFRSF17-202ENST00000396495 PSDA5PKW4 1024 aaPredicted RBP6.76□□□□□ -1.33
TNFRSF17-202ENST00000396495 RSPH6AQ9H0K4 717 aa6.76□□□□□ -1.33
TNFRSF17-202ENST00000396495 A0A0G2JS52 829 aa6.75□□□□□ -1.33
TNFRSF17-202ENST00000396495 NUDT7P0C024 238 aa6.75□□□□□ -1.33
TNFRSF17-202ENST00000396495 HSP90B1P14625 803 aaKnown RBP6.75□□□□□ -1.33
TNFRSF17-202ENST00000396495 ZNF326Q5BKZ1 582 aaKnown RBP6.75□□□□□ -1.33
TNFRSF17-202ENST00000396495 AAMPQ13685 434 aa6.74□□□□□ -1.33
TNFRSF17-202ENST00000396495 EFCAB3Q8N7B9 438 aa6.74□□□□□ -1.33
TNFRSF17-202ENST00000396495 BCCIPQ9P287 314 aaKnown RBP eCLIP6.74□□□□□ -1.33
TNFRSF17-202ENST00000396495 HMGB1P09429 215 aaKnown RBP6.73□□□□□ -1.33
TNFRSF17-202ENST00000396495 TRIM26Q12899 539 aaPredicted RBP6.73□□□□□ -1.33
TNFRSF17-202ENST00000396495 POTEEQ6S8J3 1075 aa6.73□□□□□ -1.33
TNFRSF17-202ENST00000396495 BCL11BQ9C0K0 894 aaPredicted RBP6.73□□□□□ -1.33
TNFRSF17-202ENST00000396495 LHX6Q9UPM6 363 aa6.73□□□□□ -1.33
TNFRSF17-202ENST00000396495 CDK11BP21127 795 aaKnown RBP6.72□□□□□ -1.33
TNFRSF17-202ENST00000396495 SOX12O15370 315 aa6.71□□□□□ -1.34
TNFRSF17-202ENST00000396495 PTPN5P54829 565 aa6.71□□□□□ -1.34
TNFRSF17-202ENST00000396495 HRO43593 1189 aa6.7□□□□□ -1.34
TNFRSF17-202ENST00000396495 LAPTM4AQ15012 233 aa6.69□□□□□ -1.34
TNFRSF17-202ENST00000396495 KCNH8Q96L42 1107 aa6.69□□□□□ -1.34
TNFRSF17-202ENST00000396495 ZEB1P37275 1124 aaPredicted RBP6.66□□□□□ -1.34
TNFRSF17-202ENST00000396495 CIZ1Q9ULV3 898 aaPredicted RBP6.66□□□□□ -1.34
TNFRSF17-202ENST00000396495 SHROOM4Q9ULL8 1493 aa6.66□□□□□ -1.34
TNFRSF17-202ENST00000396495 DHX37Q8IY37 1157 aaKnown RBP6.65□□□□□ -1.34
TNFRSF17-202ENST00000396495 PCDHGA4Q9Y5G9 962 aa6.65□□□□□ -1.34
TNFRSF17-202ENST00000396495 CLSPNQ9HAW4 1339 aa6.65□□□□□ -1.35
TNFRSF17-202ENST00000396495 SALL2Q9Y467 1007 aaPredicted RBP6.64□□□□□ -1.35
TNFRSF17-202ENST00000396495 SLC34A2O95436 690 aa6.63□□□□□ -1.35
TNFRSF17-202ENST00000396495 ARID3AQ99856 593 aa6.63□□□□□ -1.35
TNFRSF17-202ENST00000396495 GOLGA8CPA6NN73 597 aa6.62□□□□□ -1.35
TNFRSF17-202ENST00000396495 DMRTA1Q5VZB9 504 aa6.62□□□□□ -1.35
TNFRSF17-202ENST00000396495 TRAF7Q6Q0C0 670 aa6.62□□□□□ -1.35
TNFRSF17-202ENST00000396495 VSIG10Q8N0Z9 540 aa6.62□□□□□ -1.35
TNFRSF17-202ENST00000396495 PSEN2P49810 448 aa6.61□□□□□ -1.35
TNFRSF17-202ENST00000396495 HAP1P54257 671 aaPredicted RBP6.61□□□□□ -1.35
TNFRSF17-202ENST00000396495 PUS7Q96PZ0 661 aaKnown RBP6.61□□□□□ -1.35
TNFRSF17-202ENST00000396495 NEUROD1Q13562 356 aa6.6□□□□□ -1.35
TNFRSF17-202ENST00000396495 PPP4R3BQ5MIZ7 849 aa6.6□□□□□ -1.35
TNFRSF17-202ENST00000396495 ZCCHC6Q5VYS8 1495 aaKnown RBP6.6□□□□□ -1.35
TNFRSF17-202ENST00000396495 GLIPR1L2Q4G1C9 344 aa6.59□□□□□ -1.35
TNFRSF17-202ENST00000396495 TRIM41Q8WV44 630 aa6.59□□□□□ -1.35
TNFRSF17-202ENST00000396495 VASPP50552 380 aaPredicted RBP6.58□□□□□ -1.36
TNFRSF17-202ENST00000396495 RBM10P98175 930 aaKnown RBP6.58□□□□□ -1.36
TNFRSF17-202ENST00000396495 THSD4Q6ZMP0 1018 aa6.58□□□□□ -1.36
TNFRSF17-202ENST00000396495 MS4A4AQ96JQ5 239 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms