RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 FGD6Q6ZV73 1430 aa15.16■□□□□ 0.02
DDX39B-202ENST00000396172 PLCH2O75038 1416 aa15.14■□□□□ 0.01
DDX39B-202ENST00000396172 RRBP1Q9P2E9 1410 aaKnown RBP15.14■□□□□ 0.01
DDX39B-202ENST00000396172 PPRC1Q5VV67 1664 aaKnown RBP15.13■□□□□ 0.01
DDX39B-202ENST00000396172 CD109Q6YHK3 1445 aa15.13■□□□□ 0.01
DDX39B-202ENST00000396172 TCOF1Q13428 1488 aaKnown RBP15.12■□□□□ 0.01
DDX39B-202ENST00000396172 PLEKHH2Q8IVE3 1493 aa15.12■□□□□ 0.01
DDX39B-202ENST00000396172 TEX14Q8IWB6 1497 aa15.12■□□□□ 0.01
DDX39B-202ENST00000396172 SAMD9LQ8IVG5 1584 aa15.12■□□□□ 0.01
DDX39B-202ENST00000396172 CROCC2H7BZ55 1655 aa15.11■□□□□ 0.01
DDX39B-202ENST00000396172 CAMSAP2Q08AD1 1489 aa15.11■□□□□ 0.01
DDX39B-202ENST00000396172 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.11■□□□□ 0.01
DDX39B-202ENST00000396172 FANCAO15360 1455 aa15.1■□□□□ 0.01
DDX39B-202ENST00000396172 CFDP1Q9UEE9 299 aaPredicted RBP15.1■□□□□ 0.01
DDX39B-202ENST00000396172 NEO1Q92859 1461 aa15.09■□□□□ 0.01
DDX39B-202ENST00000396172 FAM69CQ0P6D2 419 aa15.09■□□□□ 0.01
DDX39B-202ENST00000396172 ABCC1P33527 1531 aa15.09■□□□□ 0.01
DDX39B-202ENST00000396172 DNMT1P26358 1616 aaKnown RBP15.08■□□□□ 0.01
DDX39B-202ENST00000396172 ARHGEF5Q12774 1597 aa15.08■□□□□ 0
DDX39B-202ENST00000396172 ADGBQ8N7X0 1667 aa15.07■□□□□ 0
DDX39B-202ENST00000396172 EFCAB2Q5VUJ9 269 aa15.06■□□□□ 0
DDX39B-202ENST00000396172 SYCP2Q9BX26 1530 aa15.05■□□□□ -0
DDX39B-202ENST00000396172 KIAA1107Q9UPP5 1409 aa15.04■□□□□ -0
DDX39B-202ENST00000396172 TRIM26Q12899 539 aaPredicted RBP15.04■□□□□ -0
DDX39B-202ENST00000396172 ADGRL1O94910 1474 aa15.04■□□□□ -0
DDX39B-202ENST00000396172 AKNAQ7Z591 1439 aa15.02■□□□□ -0
DDX39B-202ENST00000396172 RICTORQ6R327 1708 aa15.02□□□□□ -0.01
DDX39B-202ENST00000396172 CCDC141Q6ZP82 1450 aa15.01□□□□□ -0.01
DDX39B-202ENST00000396172 SHANK2Q9UPX8 1470 aa15.01□□□□□ -0.01
DDX39B-202ENST00000396172 FAM50AQ14320 339 aaKnown RBP15.01□□□□□ -0.01
DDX39B-202ENST00000396172 ZNF777Q9ULD5 760 aaPredicted RBP15.01□□□□□ -0.01
DDX39B-202ENST00000396172 MAST1Q9Y2H9 1570 aa15□□□□□ -0.01
DDX39B-202ENST00000396172 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
DDX39B-202ENST00000396172 DAPK1P53355 1430 aa14.98□□□□□ -0.01
DDX39B-202ENST00000396172 RSPH4AQ5TD94 716 aa14.98□□□□□ -0.01
DDX39B-202ENST00000396172 ZNF518AQ6AHZ1 1483 aa14.98□□□□□ -0.01
DDX39B-202ENST00000396172 MBD5Q9P267 1494 aa14.97□□□□□ -0.01
DDX39B-202ENST00000396172 GCC2Q8IWJ2 1684 aa14.97□□□□□ -0.01
DDX39B-202ENST00000396172 KDM5CP41229 1560 aa14.96□□□□□ -0.01
DDX39B-202ENST00000396172 POGZQ7Z3K3 1410 aa14.96□□□□□ -0.02
DDX39B-202ENST00000396172 SCAPERQ9BY12 1400 aa14.96□□□□□ -0.02
DDX39B-202ENST00000396172 PLXNC1O60486 1568 aa14.96□□□□□ -0.02
DDX39B-202ENST00000396172 HECW2Q9P2P5 1572 aa14.96□□□□□ -0.02
DDX39B-202ENST00000396172 INO80Q9ULG1 1556 aaPredicted RBP14.96□□□□□ -0.02
DDX39B-202ENST00000396172 ZNF644Q9H582 1327 aaPredicted RBP14.95□□□□□ -0.02
DDX39B-202ENST00000396172 DENND4BO75064 1496 aaPredicted RBP14.95□□□□□ -0.02
DDX39B-202ENST00000396172 ARHGEF12Q9NZN5 1544 aa14.95□□□□□ -0.02
DDX39B-202ENST00000396172 ZMYM4Q5VZL5 1548 aa14.94□□□□□ -0.02
DDX39B-202ENST00000396172 ABCC5O15440 1437 aa14.93□□□□□ -0.02
DDX39B-202ENST00000396172 KDM6BO15054 1643 aa14.93□□□□□ -0.02
DDX39B-202ENST00000396172 FRMPD1Q5SYB0 1578 aa14.93□□□□□ -0.02
DDX39B-202ENST00000396172 ZFYVE16Q7Z3T8 1539 aa14.92□□□□□ -0.02
DDX39B-202ENST00000396172 ADGRL2O95490 1459 aa14.92□□□□□ -0.02
DDX39B-202ENST00000396172 C9orf84Q5VXU9 1444 aa14.92□□□□□ -0.02
DDX39B-202ENST00000396172 ATP7AQ04656 1500 aa14.92□□□□□ -0.02
DDX39B-202ENST00000396172 KIDINS220Q9ULH0 1771 aa14.91□□□□□ -0.02
DDX39B-202ENST00000396172 TRAPPC8Q9Y2L5 1435 aa14.91□□□□□ -0.02
DDX39B-202ENST00000396172 TSPY4P0CV99 314 aa14.9□□□□□ -0.02
DDX39B-202ENST00000396172 TSPY10P0CW01 314 aa14.9□□□□□ -0.02
DDX39B-202ENST00000396172 HNRNPMP52272 730 aaKnown RBP eCLIP14.9□□□□□ -0.02
DDX39B-202ENST00000396172 RTEL1-TNFRSF6BF6WH68 1400 aa14.9□□□□□ -0.02
DDX39B-202ENST00000396172 ROCK1Q13464 1354 aa14.89□□□□□ -0.03
DDX39B-202ENST00000396172 MLH3Q9UHC1 1453 aa14.88□□□□□ -0.03
DDX39B-202ENST00000396172 MAGI2Q86UL8 1455 aa14.87□□□□□ -0.03
DDX39B-202ENST00000396172 ANKRD30AQ9BXX3 1397 aa14.87□□□□□ -0.03
DDX39B-202ENST00000396172 ITGAEP38570 1179 aa14.87□□□□□ -0.03
DDX39B-202ENST00000396172 PTPRKQ15262 1439 aa14.86□□□□□ -0.03
DDX39B-202ENST00000396172 ABCA6Q8N139 1617 aa14.86□□□□□ -0.03
DDX39B-202ENST00000396172 SPAG9O60271 1321 aaKnown RBP14.86□□□□□ -0.03
DDX39B-202ENST00000396172 HFM1A2PYH4 1435 aa14.85□□□□□ -0.03
DDX39B-202ENST00000396172 ARHGEF40Q8TER5 1519 aa14.85□□□□□ -0.03
DDX39B-202ENST00000396172 EIF2AK4Q9P2K8 1649 aaKnown RBP14.85□□□□□ -0.03
DDX39B-202ENST00000396172 DUOX2Q9NRD8 1548 aa14.84□□□□□ -0.03
DDX39B-202ENST00000396172 PCGF6Q9BYE7 350 aa14.84□□□□□ -0.03
DDX39B-202ENST00000396172 DIP2CQ9Y2E4 1556 aa14.83□□□□□ -0.03
DDX39B-202ENST00000396172 NCOA1Q15788 1441 aa14.83□□□□□ -0.03
DDX39B-202ENST00000396172 BCORL1Q5H9F3 1711 aa14.83□□□□□ -0.04
DDX39B-202ENST00000396172 AFAP1Q8N556 730 aa14.82□□□□□ -0.04
DDX39B-202ENST00000396172 REREQ9P2R6 1566 aa14.82□□□□□ -0.04
DDX39B-202ENST00000396172 KIF15Q9NS87 1388 aa14.8□□□□□ -0.04
DDX39B-202ENST00000396172 COL17A1Q9UMD9 1497 aaPredicted RBP14.8□□□□□ -0.04
DDX39B-202ENST00000396172 CHIC2Q9UKJ5 165 aa14.8□□□□□ -0.04
DDX39B-202ENST00000396172 NAIPQ13075 1403 aa14.8□□□□□ -0.04
DDX39B-202ENST00000396172 ACIN1Q9UKV3 1341 aaKnown RBP14.8□□□□□ -0.04
DDX39B-202ENST00000396172 HRCP23327 699 aa14.8□□□□□ -0.04
DDX39B-202ENST00000396172 MYT1LQ9UL68 1186 aa14.8□□□□□ -0.04
DDX39B-202ENST00000396172 ERBINQ96RT1 1412 aa14.8□□□□□ -0.04
DDX39B-202ENST00000396172 RAPGEF3O95398 923 aa14.79□□□□□ -0.04
DDX39B-202ENST00000396172 SETD5Q9C0A6 1442 aa14.79□□□□□ -0.04
DDX39B-202ENST00000396172 A2MP01023 1474 aa14.77□□□□□ -0.05
DDX39B-202ENST00000396172 DEPDC5O75140 1603 aa14.76□□□□□ -0.05
DDX39B-202ENST00000396172 ANKRD50Q9ULJ7 1429 aa14.76□□□□□ -0.05
DDX39B-202ENST00000396172 UNC13BO14795 1591 aa14.76□□□□□ -0.05
DDX39B-202ENST00000396172 RNF17Q9BXT8 1623 aaKnown RBP14.75□□□□□ -0.05
DDX39B-202ENST00000396172 ATP10AO60312 1499 aa14.75□□□□□ -0.05
DDX39B-202ENST00000396172 RRP7BPQ9NSQ0 103 aa14.75□□□□□ -0.05
DDX39B-202ENST00000396172 YEATS2Q9ULM3 1422 aa14.74□□□□□ -0.05
DDX39B-202ENST00000396172 DHX29Q7Z478 1369 aaKnown RBP14.73□□□□□ -0.05
DDX39B-202ENST00000396172 RAB3GAP2Q9H2M9 1393 aa14.73□□□□□ -0.05
DDX39B-202ENST00000396172 AGLP35573 1532 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms