RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 EPRSP07814 1512 aaKnown RBP17.54■□□□□ 0.4
PPP3CB-204ENST00000394829 CDK13Q14004 1512 aaKnown RBP17.54■□□□□ 0.4
PPP3CB-204ENST00000394829 HSPA5P11021 654 aaKnown RBP17.48■□□□□ 0.39
PPP3CB-204ENST00000394829 WASHC2AQ641Q2 1341 aa17.47■□□□□ 0.39
PPP3CB-204ENST00000394829 NEFLP07196 543 aa17.47■□□□□ 0.39
PPP3CB-204ENST00000394829 FOXD1Q16676 465 aa17.47■□□□□ 0.39
PPP3CB-204ENST00000394829 MPHOSPH9Q99550 1183 aa17.47■□□□□ 0.39
PPP3CB-204ENST00000394829 RAPGEF6Q8TEU7 1601 aa17.46■□□□□ 0.39
PPP3CB-204ENST00000394829 JPH4Q96JJ6 628 aa17.46■□□□□ 0.39
PPP3CB-204ENST00000394829 AKNAQ7Z591 1439 aa17.46■□□□□ 0.39
PPP3CB-204ENST00000394829 MIA2Q96PC5 1412 aa17.46■□□□□ 0.39
PPP3CB-204ENST00000394829 SHROOM2Q13796 1616 aa17.43■□□□□ 0.38
PPP3CB-204ENST00000394829 L3MBTL2Q969R5 705 aa17.42■□□□□ 0.38
PPP3CB-204ENST00000394829 NUP153P49790 1475 aaKnown RBP17.42■□□□□ 0.38
PPP3CB-204ENST00000394829 CARMIL2Q6F5E8 1435 aa17.42■□□□□ 0.38
PPP3CB-204ENST00000394829 EIF4G2P78344 907 aaKnown RBP eCLIP17.41■□□□□ 0.38
PPP3CB-204ENST00000394829 HNRNPUQ00839 825 aaKnown RBP eCLIP17.41■□□□□ 0.38
PPP3CB-204ENST00000394829 PLB1Q6P1J6 1458 aa17.39■□□□□ 0.37
PPP3CB-204ENST00000394829 ZNF644Q9H582 1327 aaPredicted RBP17.38■□□□□ 0.37
PPP3CB-204ENST00000394829 DAPK1P53355 1430 aa17.38■□□□□ 0.37
PPP3CB-204ENST00000394829 PRG4Q92954 1404 aaPredicted RBP17.37■□□□□ 0.37
PPP3CB-204ENST00000394829 C11orf95C9JLR9 678 aaPredicted RBP17.37■□□□□ 0.37
PPP3CB-204ENST00000394829 CLASP1Q7Z460 1538 aa17.37■□□□□ 0.37
PPP3CB-204ENST00000394829 ABCA8O94911 1581 aa17.36■□□□□ 0.37
PPP3CB-204ENST00000394829 ABCC5O15440 1437 aa17.35■□□□□ 0.37
PPP3CB-204ENST00000394829 DNMT1P26358 1616 aaKnown RBP17.35■□□□□ 0.37
PPP3CB-204ENST00000394829 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
PPP3CB-204ENST00000394829 ANKRD30BQ9BXX2 1392 aa17.34■□□□□ 0.37
PPP3CB-204ENST00000394829 NBPF8Q3BBV2 869 aa17.34■□□□□ 0.37
PPP3CB-204ENST00000394829 CNTLNQ9NXG0 1405 aa17.34■□□□□ 0.37
PPP3CB-204ENST00000394829 ROCK1Q13464 1354 aa17.34■□□□□ 0.37
PPP3CB-204ENST00000394829 ERCC6L2Q5T890 1561 aa17.33■□□□□ 0.37
PPP3CB-204ENST00000394829 RPRD2Q5VT52 1461 aaKnown RBP17.32■□□□□ 0.36
PPP3CB-204ENST00000394829 NCOA1Q15788 1441 aa17.31■□□□□ 0.36
PPP3CB-204ENST00000394829 CCDC7Q96M83 1385 aa17.31■□□□□ 0.36
PPP3CB-204ENST00000394829 IRX6P78412 446 aaPredicted RBP17.3■□□□□ 0.36
PPP3CB-204ENST00000394829 SLC4A1APQ9BWU0 796 aaKnown RBP17.3■□□□□ 0.36
PPP3CB-204ENST00000394829 RBM19Q9Y4C8 960 aaKnown RBP17.3■□□□□ 0.36
PPP3CB-204ENST00000394829 TEX14Q8IWB6 1497 aa17.3■□□□□ 0.36
PPP3CB-204ENST00000394829 PRKRIP1Q9H875 184 aaPredicted RBP17.27■□□□□ 0.36
PPP3CB-204ENST00000394829 CDK11AQ9UQ88 783 aaPredicted RBP17.25■□□□□ 0.35
PPP3CB-204ENST00000394829 PTPRGP23470 1445 aa17.25■□□□□ 0.35
PPP3CB-204ENST00000394829 FAM9BQ8IZU0 186 aa17.24■□□□□ 0.35
PPP3CB-204ENST00000394829 ADCY10Q96PN6 1610 aa17.24■□□□□ 0.35
PPP3CB-204ENST00000394829 SPATA31E1Q6ZUB1 1445 aa17.24■□□□□ 0.35
PPP3CB-204ENST00000394829 KIF7Q2M1P5 1343 aa17.23■□□□□ 0.35
PPP3CB-204ENST00000394829 ATP10BO94823 1461 aa17.22■□□□□ 0.35
PPP3CB-204ENST00000394829 PZPP20742 1482 aa17.22■□□□□ 0.35
PPP3CB-204ENST00000394829 CAMSAP2Q08AD1 1489 aa17.22■□□□□ 0.35
PPP3CB-204ENST00000394829 POLR1AO95602 1720 aaPredicted RBP17.22■□□□□ 0.35
PPP3CB-204ENST00000394829 KIF14Q15058 1648 aa17.22■□□□□ 0.35
PPP3CB-204ENST00000394829 MRS2Q9HD23 443 aa17.22■□□□□ 0.35
PPP3CB-204ENST00000394829 CFDP1Q9UEE9 299 aaPredicted RBP17.22■□□□□ 0.35
PPP3CB-204ENST00000394829 TROQ12816 1431 aaPredicted RBP17.21■□□□□ 0.35
PPP3CB-204ENST00000394829 ZNF777Q9ULD5 760 aaPredicted RBP17.21■□□□□ 0.34
PPP3CB-204ENST00000394829 GPATCH8Q9UKJ3 1502 aaKnown RBP17.19■□□□□ 0.34
PPP3CB-204ENST00000394829 ADGBQ8N7X0 1667 aa17.19■□□□□ 0.34
PPP3CB-204ENST00000394829 ITSN2Q9NZM3 1697 aa17.18■□□□□ 0.34
PPP3CB-204ENST00000394829 CROCC2H7BZ55 1655 aa17.15■□□□□ 0.34
PPP3CB-204ENST00000394829 ABCC2Q92887 1545 aa17.15■□□□□ 0.34
PPP3CB-204ENST00000394829 ZNF326Q5BKZ1 582 aaKnown RBP17.14■□□□□ 0.34
PPP3CB-204ENST00000394829 MBD5Q9P267 1494 aa17.14■□□□□ 0.33
PPP3CB-204ENST00000394829 KIAA1107Q9UPP5 1409 aa17.14■□□□□ 0.33
PPP3CB-204ENST00000394829 ZBED9Q6R2W3 1325 aa17.13■□□□□ 0.33
PPP3CB-204ENST00000394829 PKD2Q13563 968 aa17.13■□□□□ 0.33
PPP3CB-204ENST00000394829 CNGB1Q14028 1251 aaPredicted RBP17.13■□□□□ 0.33
PPP3CB-204ENST00000394829 BCORL1Q5H9F3 1711 aa17.13■□□□□ 0.33
PPP3CB-204ENST00000394829 ADGRL2O95490 1459 aa17.12■□□□□ 0.33
PPP3CB-204ENST00000394829 CDC42BPAQ5VT25 1732 aa17.12■□□□□ 0.33
PPP3CB-204ENST00000394829 POLR3GLQ9BT43 218 aa17.11■□□□□ 0.33
PPP3CB-204ENST00000394829 ABCC10Q5T3U5 1492 aa17.1■□□□□ 0.33
PPP3CB-204ENST00000394829 USP47Q96K76 1375 aa17.1■□□□□ 0.33
PPP3CB-204ENST00000394829 ANKRD30AQ9BXX3 1397 aa17.1■□□□□ 0.33
PPP3CB-204ENST00000394829 DHX29Q7Z478 1369 aaKnown RBP17.09■□□□□ 0.33
PPP3CB-204ENST00000394829 ERICH6BQ5W0A0 696 aa17.09■□□□□ 0.33
PPP3CB-204ENST00000394829 PPP4R2Q9NY27 417 aa17.09■□□□□ 0.33
PPP3CB-204ENST00000394829 ANKRD50Q9ULJ7 1429 aa17.08■□□□□ 0.33
PPP3CB-204ENST00000394829 ZCCHC11Q5TAX3 1644 aaKnown RBP17.08■□□□□ 0.32
PPP3CB-204ENST00000394829 UHRF1BP1LA0JNW5 1464 aa17.08■□□□□ 0.32
PPP3CB-204ENST00000394829 PLEKHD1A6NEE1 506 aa17.07■□□□□ 0.32
PPP3CB-204ENST00000394829 MSH5O43196 834 aa17.07■□□□□ 0.32
PPP3CB-204ENST00000394829 KDM5CP41229 1560 aa17.07■□□□□ 0.32
PPP3CB-204ENST00000394829 B4GALNT3Q6L9W6 998 aa17.05■□□□□ 0.32
PPP3CB-204ENST00000394829 NUP155O75694 1391 aa17.04■□□□□ 0.32
PPP3CB-204ENST00000394829 OSCARQ8IYS5 282 aa17.03■□□□□ 0.32
PPP3CB-204ENST00000394829 C9orf84Q5VXU9 1444 aa17.02■□□□□ 0.31
PPP3CB-204ENST00000394829 CDC42BPBQ9Y5S2 1711 aa17.02■□□□□ 0.31
PPP3CB-204ENST00000394829 TTC37Q6PGP7 1564 aa17.01■□□□□ 0.31
PPP3CB-204ENST00000394829 PREX2Q70Z35 1606 aa17■□□□□ 0.31
PPP3CB-204ENST00000394829 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
PPP3CB-204ENST00000394829 UHRF1BP1Q6BDS2 1440 aa17■□□□□ 0.31
PPP3CB-204ENST00000394829 FANCIQ9NVI1 1328 aa16.99■□□□□ 0.31
PPP3CB-204ENST00000394829 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.99■□□□□ 0.31
PPP3CB-204ENST00000394829 CARD11Q9BXL7 1154 aa16.99■□□□□ 0.31
PPP3CB-204ENST00000394829 KDM2AQ9Y2K7 1162 aa16.99■□□□□ 0.31
PPP3CB-204ENST00000394829 RALGAPBQ86X10 1494 aa16.99■□□□□ 0.31
PPP3CB-204ENST00000394829 SHANK2Q9UPX8 1470 aa16.99■□□□□ 0.31
PPP3CB-204ENST00000394829 HNRNPMP52272 730 aaKnown RBP eCLIP16.98■□□□□ 0.31
PPP3CB-204ENST00000394829 TSPY4P0CV99 314 aa16.97■□□□□ 0.31
PPP3CB-204ENST00000394829 TSPY10P0CW01 314 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms