RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 NISCHQ9Y2I1 1504 aa25.96■■□□□ 1.75
PPP3CB-204ENST00000394829 CCDC180Q9P1Z9 1646 aa22.59■■□□□ 1.21
PPP3CB-204ENST00000394829 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
PPP3CB-204ENST00000394829 ZCCHC6Q5VYS8 1495 aaKnown RBP21.84■■□□□ 1.09
PPP3CB-204ENST00000394829 SUPT5HO00267 1087 aaKnown RBP21.64■■□□□ 1.06
PPP3CB-204ENST00000394829 DCAF1Q9Y4B6 1507 aa21.43■■□□□ 1.02
PPP3CB-204ENST00000394829 DCAF8L2P0C7V8 631 aa21.33■■□□□ 1
PPP3CB-204ENST00000394829 ABCC9O60706 1549 aa21.27■■□□□ 1
PPP3CB-204ENST00000394829 MYO15BQ96JP2 1530 aa21.12■□□□□ 0.97
PPP3CB-204ENST00000394829 CHIC1Q5VXU3 224 aa21.07■□□□□ 0.96
PPP3CB-204ENST00000394829 NACADO15069 1562 aa20.97■□□□□ 0.95
PPP3CB-204ENST00000394829 SCRIBQ14160 1630 aa20.83■□□□□ 0.93
PPP3CB-204ENST00000394829 RB1CC1Q8TDY2 1594 aa20.78■□□□□ 0.92
PPP3CB-204ENST00000394829 HRCP23327 699 aa20.59■□□□□ 0.89
PPP3CB-204ENST00000394829 PCGF6Q9BYE7 350 aa20.55■□□□□ 0.88
PPP3CB-204ENST00000394829 UNC13AQ9UPW8 1703 aa20.52■□□□□ 0.88
PPP3CB-204ENST00000394829 LOC105371045A0A1W2PR82 267 aa20.49■□□□□ 0.87
PPP3CB-204ENST00000394829 RSF1Q96T23 1441 aaPredicted RBP20.37■□□□□ 0.85
PPP3CB-204ENST00000394829 BICRAQ9NZM4 1560 aa20.24■□□□□ 0.83
PPP3CB-204ENST00000394829 PPARGC1BQ86YN6 1023 aaKnown RBP20.21■□□□□ 0.83
PPP3CB-204ENST00000394829 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
PPP3CB-204ENST00000394829 TRIM41Q8WV44 630 aa20.12■□□□□ 0.81
PPP3CB-204ENST00000394829 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
PPP3CB-204ENST00000394829 TRIM26Q12899 539 aaPredicted RBP20.09■□□□□ 0.81
PPP3CB-204ENST00000394829 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
PPP3CB-204ENST00000394829 BAZ1AQ9NRL2 1556 aaPredicted RBP20.01■□□□□ 0.79
PPP3CB-204ENST00000394829 FAM9AQ8IZU1 332 aaPredicted RBP20.01■□□□□ 0.79
PPP3CB-204ENST00000394829 WIZO95785 1651 aa19.97■□□□□ 0.79
PPP3CB-204ENST00000394829 SMARCA4P51532 1647 aa19.96■□□□□ 0.79
PPP3CB-204ENST00000394829 EHMT2Q96KQ7 1210 aa19.87■□□□□ 0.77
PPP3CB-204ENST00000394829 TOP2AP11388 1531 aaKnown RBP19.7■□□□□ 0.74
PPP3CB-204ENST00000394829 PEG3Q9GZU2 1588 aa19.7■□□□□ 0.74
PPP3CB-204ENST00000394829 EIF4G1Q04637 1599 aaKnown RBP19.66■□□□□ 0.74
PPP3CB-204ENST00000394829 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
PPP3CB-204ENST00000394829 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
PPP3CB-204ENST00000394829 SMARCA2P51531 1590 aa19.56■□□□□ 0.72
PPP3CB-204ENST00000394829 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
PPP3CB-204ENST00000394829 CCDC88BA6NC98 1476 aa19.51■□□□□ 0.71
PPP3CB-204ENST00000394829 BAZ1BQ9UIG0 1483 aaKnown RBP19.45■□□□□ 0.7
PPP3CB-204ENST00000394829 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
PPP3CB-204ENST00000394829 HMGXB3Q12766 1538 aa19.36■□□□□ 0.69
PPP3CB-204ENST00000394829 NCAPD3P42695 1498 aa19.36■□□□□ 0.69
PPP3CB-204ENST00000394829 SOGA1O94964 1423 aa19.34■□□□□ 0.69
PPP3CB-204ENST00000394829 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.32■□□□□ 0.68
PPP3CB-204ENST00000394829 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
PPP3CB-204ENST00000394829 CEP162Q5TB80 1403 aa19.27■□□□□ 0.68
PPP3CB-204ENST00000394829 RUSC2Q8N2Y8 1516 aa19.26■□□□□ 0.67
PPP3CB-204ENST00000394829 TTBK1Q5TCY1 1321 aaPredicted RBP19.25■□□□□ 0.67
PPP3CB-204ENST00000394829 WRNQ14191 1432 aaPredicted RBP eCLIP19.25■□□□□ 0.67
PPP3CB-204ENST00000394829 CCER1Q8TC90 406 aaPredicted RBP19.24■□□□□ 0.67
PPP3CB-204ENST00000394829 TNIKQ9UKE5 1360 aa19.21■□□□□ 0.67
PPP3CB-204ENST00000394829 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
PPP3CB-204ENST00000394829 SCAF1Q9H7N4 1312 aaKnown RBP19.19■□□□□ 0.66
PPP3CB-204ENST00000394829 EEA1Q15075 1411 aa19.17■□□□□ 0.66
PPP3CB-204ENST00000394829 UBTFP17480 764 aaKnown RBP19.16■□□□□ 0.66
PPP3CB-204ENST00000394829 GOLGA3Q08378 1498 aa19.08■□□□□ 0.65
PPP3CB-204ENST00000394829 SYNJ1O43426 1573 aa19.05■□□□□ 0.64
PPP3CB-204ENST00000394829 CFTRP13569 1480 aa18.97■□□□□ 0.63
PPP3CB-204ENST00000394829 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
PPP3CB-204ENST00000394829 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
PPP3CB-204ENST00000394829 KIF21BO75037 1637 aa18.94■□□□□ 0.62
PPP3CB-204ENST00000394829 DIEXFQ68CQ4 756 aaKnown RBP18.92■□□□□ 0.62
PPP3CB-204ENST00000394829 CLIP1P30622 1438 aa18.88■□□□□ 0.61
PPP3CB-204ENST00000394829 CADPSQ9ULU8 1353 aa18.86■□□□□ 0.61
PPP3CB-204ENST00000394829 RAPGEF2Q9Y4G8 1499 aa18.85■□□□□ 0.61
PPP3CB-204ENST00000394829 TOP2BQ02880 1626 aa18.84■□□□□ 0.61
PPP3CB-204ENST00000394829 BIVM-ERCC5R4GMW8 1640 aa18.84■□□□□ 0.61
PPP3CB-204ENST00000394829 ACIN1Q9UKV3 1341 aaKnown RBP18.82■□□□□ 0.6
PPP3CB-204ENST00000394829 NEUROD1Q13562 356 aa18.82■□□□□ 0.6
PPP3CB-204ENST00000394829 HNRNPUL2Q1KMD3 747 aaKnown RBP18.81■□□□□ 0.6
PPP3CB-204ENST00000394829 VPS8Q8N3P4 1428 aa18.81■□□□□ 0.6
PPP3CB-204ENST00000394829 RANGAP1P46060 587 aaPredicted RBP18.8■□□□□ 0.6
PPP3CB-204ENST00000394829 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
PPP3CB-204ENST00000394829 CUX1P39880 1505 aa18.78■□□□□ 0.6
PPP3CB-204ENST00000394829 NESP48681 1621 aa18.75■□□□□ 0.59
PPP3CB-204ENST00000394829 ZNF316A6NFI3 1004 aaPredicted RBP18.74■□□□□ 0.59
PPP3CB-204ENST00000394829 APLP2Q06481 763 aa18.72■□□□□ 0.59
PPP3CB-204ENST00000394829 LAMC3Q9Y6N6 1575 aa18.69■□□□□ 0.58
PPP3CB-204ENST00000394829 FANCD2Q9BXW9 1451 aa18.68■□□□□ 0.58
PPP3CB-204ENST00000394829 CENPBP07199 599 aaPredicted RBP18.66■□□□□ 0.58
PPP3CB-204ENST00000394829 MYT1Q01538 1121 aa18.65■□□□□ 0.58
PPP3CB-204ENST00000394829 GTF3C3Q9Y5Q9 886 aa18.63■□□□□ 0.57
PPP3CB-204ENST00000394829 PRXQ9BXM0 1461 aa18.62■□□□□ 0.57
PPP3CB-204ENST00000394829 ERICH3Q5RHP9 1530 aa18.61■□□□□ 0.57
PPP3CB-204ENST00000394829 ARAP1Q96P48 1450 aa18.58■□□□□ 0.56
PPP3CB-204ENST00000394829 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
PPP3CB-204ENST00000394829 DNMBPQ6XZF7 1577 aa18.54■□□□□ 0.56
PPP3CB-204ENST00000394829 FGD5Q6ZNL6 1462 aa18.53■□□□□ 0.56
PPP3CB-204ENST00000394829 KANK4Q5T7N3 995 aaPredicted RBP18.53■□□□□ 0.56
PPP3CB-204ENST00000394829 MIER1Q8N108 512 aa18.52■□□□□ 0.56
PPP3CB-204ENST00000394829 YTHDC1Q96MU7 727 aaKnown RBP18.52■□□□□ 0.55
PPP3CB-204ENST00000394829 TOPBP1Q92547 1522 aa18.51■□□□□ 0.55
PPP3CB-204ENST00000394829 KIF27Q86VH2 1401 aa18.5■□□□□ 0.55
PPP3CB-204ENST00000394829 PDS5BQ9NTI5 1447 aa18.49■□□□□ 0.55
PPP3CB-204ENST00000394829 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
PPP3CB-204ENST00000394829 DHX57Q6P158 1386 aaKnown RBP18.44■□□□□ 0.54
PPP3CB-204ENST00000394829 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
PPP3CB-204ENST00000394829 ARHGAP35Q9NRY4 1499 aa18.41■□□□□ 0.54
PPP3CB-204ENST00000394829 CUX2O14529 1486 aa18.4■□□□□ 0.54
PPP3CB-204ENST00000394829 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms